RNA–Protein interactions for RNA: ENST00000625668.2

LINC02028-223, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 646 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-223	ENST00000625668	EFCAB5	A4FU69	1503 aa		11.09	□□□□□ -0.63
LINC02028-223	ENST00000625668	UHRF1BP1L	A0JNW5	1464 aa		11.09	□□□□□ -0.63
LINC02028-223	ENST00000625668	MSS51	Q4VC12	460 aa		11.09	□□□□□ -0.63
LINC02028-223	ENST00000625668	PRDM9	Q9NQV7	894 aa		11.09	□□□□□ -0.63
LINC02028-223	ENST00000625668	TOR4A	Q9NXH8	423 aa		11.09	□□□□□ -0.63
LINC02028-223	ENST00000625668	ABCC2	Q92887	1545 aa		11.09	□□□□□ -0.63
LINC02028-223	ENST00000625668	FHOD3	Q2V2M9	1422 aa		11.09	□□□□□ -0.63
LINC02028-223	ENST00000625668	PLB1	Q6P1J6	1458 aa		11.08	□□□□□ -0.64
LINC02028-223	ENST00000625668	ST8SIA5	O15466	376 aa		11.08	□□□□□ -0.64
LINC02028-223	ENST00000625668	RNF19B	Q6ZMZ0	732 aa		11.08	□□□□□ -0.64
LINC02028-223	ENST00000625668	KDM2A	Q9Y2K7	1162 aa		11.08	□□□□□ -0.64
LINC02028-223	ENST00000625668	GRIPAP1	Q4V328	841 aa		11.07	□□□□□ -0.64
LINC02028-223	ENST00000625668	CRIPAK	Q8N1N5	446 aa		11.07	□□□□□ -0.64
LINC02028-223	ENST00000625668	CD46	P15529	392 aa		11.06	□□□□□ -0.64
LINC02028-223	ENST00000625668	ABCA8	O94911	1581 aa		11.06	□□□□□ -0.64
LINC02028-223	ENST00000625668	MAPKBP1	O60336	1514 aa		11.05	□□□□□ -0.64
LINC02028-223	ENST00000625668	AVP	P01185	164 aa		11.05	□□□□□ -0.64
LINC02028-223	ENST00000625668	ARHGAP35	Q9NRY4	1499 aa		11.05	□□□□□ -0.64
LINC02028-223	ENST00000625668	HAP1	P54257	671 aa	Predicted RBP	11.04	□□□□□ -0.64
LINC02028-223	ENST00000625668	MAP2K5	Q13163	448 aa		11.04	□□□□□ -0.64
LINC02028-223	ENST00000625668	KDM5B	Q9UGL1	1544 aa		11.04	□□□□□ -0.64
LINC02028-223	ENST00000625668	MMP16	P51512	607 aa		11.02	□□□□□ -0.65
LINC02028-223	ENST00000625668		Q3C1V9	767 aa		11.02	□□□□□ -0.65
LINC02028-223	ENST00000625668	CYP4X1	Q8N118	509 aa		11.02	□□□□□ -0.65
LINC02028-223	ENST00000625668	IRF6	O14896	467 aa		11.01	□□□□□ -0.65
LINC02028-223	ENST00000625668	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.01	□□□□□ -0.65
LINC02028-223	ENST00000625668	RAPGEF6	Q8TEU7	1601 aa		11	□□□□□ -0.65
LINC02028-223	ENST00000625668	ZBTB24	O43167	697 aa	Predicted RBP	11	□□□□□ -0.65
LINC02028-223	ENST00000625668	CLIP1	P30622	1438 aa		11	□□□□□ -0.65
LINC02028-223	ENST00000625668	ASXL2	Q76L83	1435 aa		11	□□□□□ -0.65
LINC02028-223	ENST00000625668	KDM4A	O75164	1064 aa		10.99	□□□□□ -0.65
LINC02028-223	ENST00000625668	DACH1	Q9UI36	760 aa		10.99	□□□□□ -0.65
LINC02028-223	ENST00000625668	NUP153	P49790	1475 aa	Known RBP	10.99	□□□□□ -0.65
LINC02028-223	ENST00000625668	ABCC10	Q5T3U5	1492 aa		10.99	□□□□□ -0.65
LINC02028-223	ENST00000625668	ARID3C	A6NKF2	412 aa		10.98	□□□□□ -0.65
LINC02028-223	ENST00000625668	SMCP	P49901	116 aa	Predicted RBP	10.98	□□□□□ -0.65
LINC02028-223	ENST00000625668	CTC1	Q2NKJ3	1217 aa		10.98	□□□□□ -0.65
LINC02028-223	ENST00000625668	FMN1	Q68DA7	1419 aa		10.98	□□□□□ -0.65
LINC02028-223	ENST00000625668	DIP2B	Q9P265	1576 aa		10.98	□□□□□ -0.65
LINC02028-223	ENST00000625668	WNT7A	O00755	349 aa		10.97	□□□□□ -0.65
LINC02028-223	ENST00000625668	TRIM32	Q13049	653 aa		10.97	□□□□□ -0.65
LINC02028-223	ENST00000625668	USB1	Q9BQ65	265 aa	Known RBP	10.97	□□□□□ -0.65
LINC02028-223	ENST00000625668	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.97	□□□□□ -0.65
LINC02028-223	ENST00000625668	CEP162	Q5TB80	1403 aa		10.97	□□□□□ -0.65
LINC02028-223	ENST00000625668	ATP10B	O94823	1461 aa		10.96	□□□□□ -0.65
LINC02028-223	ENST00000625668	LOC105371045	A0A1W2PR82	267 aa		10.96	□□□□□ -0.65
LINC02028-223	ENST00000625668	AXIN1	O15169	862 aa		10.96	□□□□□ -0.65
LINC02028-223	ENST00000625668	DXO	O77932	396 aa	Known RBP	10.96	□□□□□ -0.65
LINC02028-223	ENST00000625668	LCE2A	Q5TA79	106 aa	Predicted RBP	10.96	□□□□□ -0.65
LINC02028-223	ENST00000625668	WDR7	Q9Y4E6	1490 aa		10.95	□□□□□ -0.66
LINC02028-223	ENST00000625668	USP46	P62068	366 aa		10.95	□□□□□ -0.66
LINC02028-223	ENST00000625668	MDM2	Q00987	491 aa	Predicted RBP	10.95	□□□□□ -0.66
LINC02028-223	ENST00000625668	FBXO41	Q8TF61	875 aa		10.95	□□□□□ -0.66
LINC02028-223	ENST00000625668	KIF13A	Q9H1H9	1805 aa		10.95	□□□□□ -0.66
LINC02028-223	ENST00000625668	TTC24	A2A3L6	582 aa	Predicted RBP	10.94	□□□□□ -0.66
LINC02028-223	ENST00000625668	FAM69C	Q0P6D2	419 aa		10.94	□□□□□ -0.66
LINC02028-223	ENST00000625668	HLA-C	Q95604	372 aa		10.94	□□□□□ -0.66
LINC02028-223	ENST00000625668	TREML4	Q6UXN2	200 aa		10.93	□□□□□ -0.66
LINC02028-223	ENST00000625668	SNIP1	Q8TAD8	396 aa	Known RBP	10.93	□□□□□ -0.66
LINC02028-223	ENST00000625668	HECW1	Q76N89	1606 aa		10.93	□□□□□ -0.66
LINC02028-223	ENST00000625668	PCF11	O94913	1555 aa	Known RBP	10.93	□□□□□ -0.66
LINC02028-223	ENST00000625668	EPRS	P07814	1512 aa	Known RBP	10.93	□□□□□ -0.66
LINC02028-223	ENST00000625668	TULP1	O00294	542 aa	Predicted RBP	10.92	□□□□□ -0.66
LINC02028-223	ENST00000625668	HOXA2	O43364	376 aa		10.92	□□□□□ -0.66
LINC02028-223	ENST00000625668	SMPD1	P17405	629 aa		10.92	□□□□□ -0.66
LINC02028-223	ENST00000625668	GMPR2	Q9P2T1	348 aa	Known RBP	10.92	□□□□□ -0.66
LINC02028-223	ENST00000625668	CDK13	Q14004	1512 aa	Known RBP	10.92	□□□□□ -0.66
LINC02028-223	ENST00000625668	GLI2	P10070	1586 aa		10.91	□□□□□ -0.66
LINC02028-223	ENST00000625668	CCDC102A	Q96A19	550 aa		10.91	□□□□□ -0.66
LINC02028-223	ENST00000625668	MRGPRX2	Q96LB1	330 aa		10.91	□□□□□ -0.66
LINC02028-223	ENST00000625668	CASKIN1	Q8WXD9	1431 aa		10.91	□□□□□ -0.66
LINC02028-223	ENST00000625668	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.9	□□□□□ -0.66
LINC02028-223	ENST00000625668	FYCO1	Q9BQS8	1478 aa		10.89	□□□□□ -0.67
LINC02028-223	ENST00000625668	VSIG10	Q8N0Z9	540 aa		10.89	□□□□□ -0.67
LINC02028-223	ENST00000625668	GPCPD1	Q9NPB8	672 aa		10.89	□□□□□ -0.67
LINC02028-223	ENST00000625668	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.88	□□□□□ -0.67
LINC02028-223	ENST00000625668	HECW2	Q9P2P5	1572 aa		10.88	□□□□□ -0.67
LINC02028-223	ENST00000625668	LMTK3	Q96Q04	1460 aa		10.87	□□□□□ -0.67
LINC02028-223	ENST00000625668	C11orf95	C9JLR9	678 aa	Predicted RBP	10.87	□□□□□ -0.67
LINC02028-223	ENST00000625668	CLCN1	P35523	988 aa		10.87	□□□□□ -0.67
LINC02028-223	ENST00000625668	REPIN1	Q9BWE0	567 aa	Known RBP	10.87	□□□□□ -0.67
LINC02028-223	ENST00000625668	MAP3K4	Q9Y6R4	1608 aa		10.87	□□□□□ -0.67
LINC02028-223	ENST00000625668		J3QL48	77 aa		10.86	□□□□□ -0.67
LINC02028-223	ENST00000625668	SOCS7	O14512	581 aa		10.86	□□□□□ -0.67
LINC02028-223	ENST00000625668	GUCA2A	Q02747	115 aa		10.86	□□□□□ -0.67
LINC02028-223	ENST00000625668	CCDC18	Q5T9S5	1454 aa		10.86	□□□□□ -0.67
LINC02028-223	ENST00000625668	WNT7B	P56706	349 aa		10.85	□□□□□ -0.67
LINC02028-223	ENST00000625668	SKOR1	P84550	965 aa		10.85	□□□□□ -0.67
LINC02028-223	ENST00000625668	CCDC24	Q8N4L8	307 aa		10.85	□□□□□ -0.67
LINC02028-223	ENST00000625668	JUND	P17535	347 aa		10.84	□□□□□ -0.67
LINC02028-223	ENST00000625668	RC3H1	Q5TC82	1133 aa	Known RBP	10.84	□□□□□ -0.67
LINC02028-223	ENST00000625668	SYMPK	Q92797	1274 aa	Known RBP	10.84	□□□□□ -0.67
LINC02028-223	ENST00000625668	LRRIQ1	Q96JM4	1722 aa		10.84	□□□□□ -0.67
LINC02028-223	ENST00000625668	PLEKHD1	A6NEE1	506 aa		10.83	□□□□□ -0.68
LINC02028-223	ENST00000625668	ATP13A2	Q9NQ11	1180 aa		10.83	□□□□□ -0.68
LINC02028-223	ENST00000625668	ABCA9	Q8IUA7	1624 aa		10.83	□□□□□ -0.68
LINC02028-223	ENST00000625668	CD109	Q6YHK3	1445 aa		10.83	□□□□□ -0.68
LINC02028-223	ENST00000625668	VPS8	Q8N3P4	1428 aa		10.83	□□□□□ -0.68
LINC02028-223	ENST00000625668	PPRC1	Q5VV67	1664 aa	Known RBP	10.82	□□□□□ -0.68
LINC02028-223	ENST00000625668	CFAP43	Q8NDM7	1665 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms