RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 NRAPQ86VF7 1730 aa21.12■□□□□ 0.97
TUBB3-215ENST00000625617 ARHGEF28Q8N1W1 1705 aaKnown RBP21.12■□□□□ 0.97
TUBB3-215ENST00000625617 SRCAPQ6ZRS2 3230 aa21.12■□□□□ 0.97
TUBB3-215ENST00000625617 COL14A1Q05707 1796 aaKnown RBP21.11■□□□□ 0.97
TUBB3-215ENST00000625617 PAK3O75914 559 aaPredicted RBP21.11■□□□□ 0.97
TUBB3-215ENST00000625617 DEFB132Q7Z7B7 95 aa21.11■□□□□ 0.97
TUBB3-215ENST00000625617 BRWD3Q6RI45 1802 aa21.11■□□□□ 0.97
TUBB3-215ENST00000625617 FAM98CQ17RN3 349 aaKnown RBP21.1■□□□□ 0.97
TUBB3-215ENST00000625617 PRDM11Q9NQV5 511 aa21.09■□□□□ 0.97
TUBB3-215ENST00000625617 ITSN1Q15811 1721 aa21.08■□□□□ 0.97
TUBB3-215ENST00000625617 NUDT16Q96DE0 195 aaKnown RBP21.08■□□□□ 0.97
TUBB3-215ENST00000625617 CRYBG1Q9Y4K1 1723 aa21.07■□□□□ 0.96
TUBB3-215ENST00000625617 SPATA31A5Q5VU36 1347 aa21.05■□□□□ 0.96
TUBB3-215ENST00000625617 SPATA31A7Q8IWB4 1347 aa21.05■□□□□ 0.96
TUBB3-215ENST00000625617 CDK19Q9BWU1 502 aa21.04■□□□□ 0.96
TUBB3-215ENST00000625617 KIAA0232Q92628 1395 aa21.04■□□□□ 0.96
TUBB3-215ENST00000625617 POLR3AO14802 1390 aaPredicted RBP21.03■□□□□ 0.96
TUBB3-215ENST00000625617 BAG6P46379 1132 aa21.03■□□□□ 0.96
TUBB3-215ENST00000625617 TOPAZ1Q8N9V7 1692 aa21.02■□□□□ 0.95
TUBB3-215ENST00000625617 CCDC61Q9Y6R9 512 aa21.01■□□□□ 0.95
TUBB3-215ENST00000625617 KIAA1210Q9ULL0 1709 aa21.01■□□□□ 0.95
TUBB3-215ENST00000625617 PHRF1Q9P1Y6 1649 aaKnown RBP21■□□□□ 0.95
TUBB3-215ENST00000625617 THSD7AQ9UPZ6 1657 aa21■□□□□ 0.95
TUBB3-215ENST00000625617 ACEP12821 1306 aa21■□□□□ 0.95
TUBB3-215ENST00000625617 CHRNA2Q15822 529 aa20.99■□□□□ 0.95
TUBB3-215ENST00000625617 NUTM2GQ5VZR2 741 aa20.99■□□□□ 0.95
TUBB3-215ENST00000625617 SPATA31A1Q5TZJ5 1347 aa20.98■□□□□ 0.95
TUBB3-215ENST00000625617 ZC3H6P61129 1189 aaKnown RBP20.97■□□□□ 0.95
TUBB3-215ENST00000625617 NBPF8Q3BBV2 869 aa20.97■□□□□ 0.95
TUBB3-215ENST00000625617 STRN4Q9NRL3 753 aa20.97■□□□□ 0.95
TUBB3-215ENST00000625617 PLEKHG3A1L390 1219 aa20.96■□□□□ 0.95
TUBB3-215ENST00000625617 NBPF1Q3BBV0 1214 aa20.96■□□□□ 0.95
TUBB3-215ENST00000625617 FAM182BQ5T319 152 aa20.96■□□□□ 0.95
TUBB3-215ENST00000625617 NRKQ7Z2Y5 1582 aa20.96■□□□□ 0.95
TUBB3-215ENST00000625617 CENPJQ9HC77 1338 aaPredicted RBP20.95■□□□□ 0.94
TUBB3-215ENST00000625617 SRPK2P78362 688 aaKnown RBP20.94■□□□□ 0.94
TUBB3-215ENST00000625617 ABTB2Q8N961 1025 aa20.94■□□□□ 0.94
TUBB3-215ENST00000625617 DISP2A7MBM2 1401 aa20.94■□□□□ 0.94
TUBB3-215ENST00000625617 PPIP5K1Q6PFW1 1433 aa20.94■□□□□ 0.94
TUBB3-215ENST00000625617 SSH2Q76I76 1423 aa20.94■□□□□ 0.94
TUBB3-215ENST00000625617 RGPD1P0DJD0 1748 aa20.93■□□□□ 0.94
TUBB3-215ENST00000625617 USP19O94966 1318 aa20.93■□□□□ 0.94
TUBB3-215ENST00000625617 EN1Q05925 392 aaPredicted RBP20.92■□□□□ 0.94
TUBB3-215ENST00000625617 CPDO75976 1380 aa20.92■□□□□ 0.94
TUBB3-215ENST00000625617 LRP5O75197 1615 aa20.92■□□□□ 0.94
TUBB3-215ENST00000625617 PSDA5PKW4 1024 aaPredicted RBP20.91■□□□□ 0.94
TUBB3-215ENST00000625617 EVA1CP58658 441 aa20.9■□□□□ 0.94
TUBB3-215ENST00000625617 USP35Q9P2H5 1018 aa20.9■□□□□ 0.94
TUBB3-215ENST00000625617 CABP2Q9NPB3 220 aa20.89■□□□□ 0.93
TUBB3-215ENST00000625617 BRD4O60885 1362 aaPredicted RBP20.88■□□□□ 0.93
TUBB3-215ENST00000625617 FAM196AQ6ZSG2 479 aa20.88■□□□□ 0.93
TUBB3-215ENST00000625617 BARGINQ6ZT62 677 aa20.88■□□□□ 0.93
TUBB3-215ENST00000625617 NLRP13Q86W25 1043 aa20.88■□□□□ 0.93
TUBB3-215ENST00000625617 CAMTA1Q9Y6Y1 1673 aa20.88■□□□□ 0.93
TUBB3-215ENST00000625617 TNS1Q9HBL0 1735 aaKnown RBP20.87■□□□□ 0.93
TUBB3-215ENST00000625617 LMO7Q8WWI1 1683 aa20.87■□□□□ 0.93
TUBB3-215ENST00000625617 QRICH2Q9H0J4 1663 aa20.86■□□□□ 0.93
TUBB3-215ENST00000625617 LARP1Q6PKG0 1096 aaKnown RBP20.86■□□□□ 0.93
TUBB3-215ENST00000625617 USP6P35125 1406 aa20.86■□□□□ 0.93
TUBB3-215ENST00000625617 TRIM37O94972 964 aa20.85■□□□□ 0.93
TUBB3-215ENST00000625617 GCP02774 474 aa20.85■□□□□ 0.93
TUBB3-215ENST00000625617 TCP11L2Q8N4U5 519 aa20.85■□□□□ 0.93
TUBB3-215ENST00000625617 COL5A2P05997 1499 aaPredicted RBP20.84■□□□□ 0.93
TUBB3-215ENST00000625617 PDE3BQ13370 1112 aa20.84■□□□□ 0.93
TUBB3-215ENST00000625617 R3HDM1Q15032 1099 aaKnown RBP20.83■□□□□ 0.93
TUBB3-215ENST00000625617 EZH2Q15910 746 aaKnown RBP20.83■□□□□ 0.93
TUBB3-215ENST00000625617 L3MBTL2Q969R5 705 aa20.83■□□□□ 0.93
TUBB3-215ENST00000625617 PARD3Q8TEW0 1356 aa20.83■□□□□ 0.92
TUBB3-215ENST00000625617 CABP1Q9NZU7 370 aa20.82■□□□□ 0.92
TUBB3-215ENST00000625617 THRAP3Q9Y2W1 955 aaKnown RBP20.82■□□□□ 0.92
TUBB3-215ENST00000625617 EVC2Q86UK5 1308 aa20.8■□□□□ 0.92
TUBB3-215ENST00000625617 SLIT3O75094 1523 aa20.8■□□□□ 0.92
TUBB3-215ENST00000625617 ZBTB7CA1YPR0 619 aa20.8■□□□□ 0.92
TUBB3-215ENST00000625617 APBA3O96018 575 aa20.8■□□□□ 0.92
TUBB3-215ENST00000625617 NLRP6P59044 892 aa20.8■□□□□ 0.92
TUBB3-215ENST00000625617 CAMKK2Q96RR4 588 aa20.8■□□□□ 0.92
TUBB3-215ENST00000625617 ROCK2O75116 1388 aaKnown RBP20.79■□□□□ 0.92
TUBB3-215ENST00000625617 CRB1P82279 1406 aa20.78■□□□□ 0.92
TUBB3-215ENST00000625617 AATKQ6ZMQ8 1374 aa20.78■□□□□ 0.92
TUBB3-215ENST00000625617 TRPM1Q7Z4N2 1603 aa20.78■□□□□ 0.92
TUBB3-215ENST00000625617 PIK3C2AO00443 1686 aa20.75■□□□□ 0.91
TUBB3-215ENST00000625617 SIN3AQ96ST3 1273 aa20.75■□□□□ 0.91
TUBB3-215ENST00000625617 OVOS2A0A0G2JMS6 1433 aa20.74■□□□□ 0.91
TUBB3-215ENST00000625617 OVOS2A0A0J9YW53 1432 aa20.74■□□□□ 0.91
TUBB3-215ENST00000625617 OVOS2Q6IE36 1432 aa20.74■□□□□ 0.91
TUBB3-215ENST00000625617 PARP4Q9UKK3 1724 aaKnown RBP20.74■□□□□ 0.91
TUBB3-215ENST00000625617 CPSF1Q10570 1443 aaKnown RBP20.73■□□□□ 0.91
TUBB3-215ENST00000625617 C11orf95C9JLR9 678 aaPredicted RBP20.73■□□□□ 0.91
TUBB3-215ENST00000625617 NEUROD1Q13562 356 aa20.72■□□□□ 0.91
TUBB3-215ENST00000625617 TOM1L2Q6ZVM7 507 aa20.72■□□□□ 0.91
TUBB3-215ENST00000625617 RREB1Q92766 1687 aa20.72■□□□□ 0.91
TUBB3-215ENST00000625617 TTC21BQ7Z4L5 1316 aa20.71■□□□□ 0.91
TUBB3-215ENST00000625617 ZNF692Q9BU19 519 aaPredicted RBP20.7■□□□□ 0.9
TUBB3-215ENST00000625617 WDR17Q8IZU2 1322 aa20.7■□□□□ 0.9
TUBB3-215ENST00000625617 TTC21AQ8NDW8 1320 aa20.7■□□□□ 0.9
TUBB3-215ENST00000625617 LRRC37A3O60309 1634 aa20.7■□□□□ 0.9
TUBB3-215ENST00000625617 DDB1Q16531 1140 aa20.69■□□□□ 0.9
TUBB3-215ENST00000625617 NBPF14Q5TI25 921 aa20.69■□□□□ 0.9
TUBB3-215ENST00000625617 KCNH5Q8NCM2 988 aa20.69■□□□□ 0.9
TUBB3-215ENST00000625617 NUP188Q5SRE5 1749 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms