RNA–Protein interactions for RNA: ENST00000625514.2

KCNQ2-209, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 5 BASIC

Gene KCNQ2, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-209ENST00000625514 XPCQ01831 940 aaPredicted RBP21.35■■□□□ 1.01
KCNQ2-209ENST00000625514 CPS1P31327 1500 aa21.35■■□□□ 1.01
KCNQ2-209ENST00000625514 MED14O60244 1454 aa21.34■■□□□ 1.01
KCNQ2-209ENST00000625514 DIAPH1O60610 1272 aaKnown RBP21.34■■□□□ 1.01
KCNQ2-209ENST00000625514 ATP7BP35670 1465 aa21.34■■□□□ 1.01
KCNQ2-209ENST00000625514 PDE3BQ13370 1112 aa21.34■■□□□ 1.01
KCNQ2-209ENST00000625514 RUNDC1Q96C34 613 aa21.34■■□□□ 1.01
KCNQ2-209ENST00000625514 RRP1P56182 461 aaKnown RBP21.34■■□□□ 1.01
KCNQ2-209ENST00000625514 WWC1Q8IX03 1113 aa21.34■■□□□ 1.01
KCNQ2-209ENST00000625514 EXOC6Q8TAG9 804 aa21.34■■□□□ 1.01
KCNQ2-209ENST00000625514 SIRT1Q96EB6 747 aa21.33■■□□□ 1.01
KCNQ2-209ENST00000625514 NSD2O96028 1365 aa21.33■■□□□ 1.01
KCNQ2-209ENST00000625514 C20orf194Q5TEA3 1177 aa21.33■■□□□ 1
KCNQ2-209ENST00000625514 TTC21BQ7Z4L5 1316 aa21.31■■□□□ 1
KCNQ2-209ENST00000625514 CPSF1Q10570 1443 aaKnown RBP21.31■■□□□ 1
KCNQ2-209ENST00000625514 ZNF521Q96K83 1311 aa21.3■■□□□ 1
KCNQ2-209ENST00000625514 ZBTB7CA1YPR0 619 aa21.3■■□□□ 1
KCNQ2-209ENST00000625514 SLFN5Q08AF3 891 aa21.3■■□□□ 1
KCNQ2-209ENST00000625514 PPP4R2Q9NY27 417 aa21.3■■□□□ 1
KCNQ2-209ENST00000625514 BCL2L13Q9BXK5 485 aa21.29■■□□□ 1
KCNQ2-209ENST00000625514 NKTRP30414 1462 aaKnown RBP21.29■■□□□ 1
KCNQ2-209ENST00000625514 BCAR3O75815 825 aa21.28■■□□□ 1
KCNQ2-209ENST00000625514 ESCO1Q5FWF5 840 aa21.28■■□□□ 1
KCNQ2-209ENST00000625514 EDC4Q6P2E9 1401 aaKnown RBP21.28■■□□□ 1
KCNQ2-209ENST00000625514 PRKAR2BP31323 418 aa21.27■■□□□ 1
KCNQ2-209ENST00000625514 LMOD2Q6P5Q4 547 aa21.27■■□□□ 1
KCNQ2-209ENST00000625514 ZNF692Q9BU19 519 aaPredicted RBP21.27■■□□□ 1
KCNQ2-209ENST00000625514 ADAMTSL3P82987 1691 aa21.27■■□□□ 1
KCNQ2-209ENST00000625514 TSR2Q969E8 191 aaKnown RBP21.27■■□□□ 1
KCNQ2-209ENST00000625514 MAPK8IP3Q9UPT6 1336 aa21.27■□□□□ 0.99
KCNQ2-209ENST00000625514 CCDC136Q96JN2 1154 aa21.26■□□□□ 0.99
KCNQ2-209ENST00000625514 THUMPD2Q9BTF0 503 aaKnown RBP21.26■□□□□ 0.99
KCNQ2-209ENST00000625514 PHACTR3Q96KR7 559 aa21.25■□□□□ 0.99
KCNQ2-209ENST00000625514 LAS1LQ9Y4W2 734 aaKnown RBP21.25■□□□□ 0.99
KCNQ2-209ENST00000625514 SHPRHQ149N8 1683 aa21.25■□□□□ 0.99
KCNQ2-209ENST00000625514 HSP90AB2PQ58FF8 381 aa21.25■□□□□ 0.99
KCNQ2-209ENST00000625514 NLRP6P59044 892 aa21.25■□□□□ 0.99
KCNQ2-209ENST00000625514 PLEKHG3A1L390 1219 aa21.24■□□□□ 0.99
KCNQ2-209ENST00000625514 ORAI2Q96SN7 254 aa21.24■□□□□ 0.99
KCNQ2-209ENST00000625514 USP32Q8NFA0 1604 aa21.24■□□□□ 0.99
KCNQ2-209ENST00000625514 RIPK4P57078 832 aa21.23■□□□□ 0.99
KCNQ2-209ENST00000625514 PROSER2Q86WR7 435 aaPredicted RBP21.23■□□□□ 0.99
KCNQ2-209ENST00000625514 AEBP1Q8IUX7 1158 aa21.23■□□□□ 0.99
KCNQ2-209ENST00000625514 RNF123Q5XPI4 1314 aa21.22■□□□□ 0.99
KCNQ2-209ENST00000625514 FOXO3O43524 673 aa21.22■□□□□ 0.99
KCNQ2-209ENST00000625514 LTV1Q96GA3 475 aaPredicted RBP21.22■□□□□ 0.99
KCNQ2-209ENST00000625514 CRBNQ96SW2 442 aa21.22■□□□□ 0.99
KCNQ2-209ENST00000625514 RGPD8O14715 1765 aaPredicted RBP21.22■□□□□ 0.99
KCNQ2-209ENST00000625514 KNDC1Q76NI1 1749 aa21.22■□□□□ 0.99
KCNQ2-209ENST00000625514 ABTB2Q8N961 1025 aa21.22■□□□□ 0.99
KCNQ2-209ENST00000625514 PLEKHF1Q96S99 279 aa21.22■□□□□ 0.99
KCNQ2-209ENST00000625514 SETD1BQ9UPS6 1966 aaKnown RBP21.21■□□□□ 0.99
KCNQ2-209ENST00000625514 TMPOP42166 694 aaKnown RBP21.21■□□□□ 0.99
KCNQ2-209ENST00000625514 FRAT1Q92837 279 aaPredicted RBP21.21■□□□□ 0.99
KCNQ2-209ENST00000625514 CDC42BPGQ6DT37 1551 aa21.2■□□□□ 0.98
KCNQ2-209ENST00000625514 E9PSI1 815 aa21.2■□□□□ 0.98
KCNQ2-209ENST00000625514 DDX17Q92841 729 aaKnown RBP21.2■□□□□ 0.98
KCNQ2-209ENST00000625514 TSHZ2Q9NRE2 1034 aa21.2■□□□□ 0.98
KCNQ2-209ENST00000625514 NPHP4O75161 1426 aaPredicted RBP21.2■□□□□ 0.98
KCNQ2-209ENST00000625514 SKAP1Q86WV1 359 aa21.2■□□□□ 0.98
KCNQ2-209ENST00000625514 USP6P35125 1406 aa21.2■□□□□ 0.98
KCNQ2-209ENST00000625514 DIP2AQ14689 1571 aa21.18■□□□□ 0.98
KCNQ2-209ENST00000625514 PTCH1Q13635 1447 aa21.18■□□□□ 0.98
KCNQ2-209ENST00000625514 DCTN1Q14203 1278 aa21.18■□□□□ 0.98
KCNQ2-209ENST00000625514 MAP2P11137 1827 aaKnown RBP21.18■□□□□ 0.98
KCNQ2-209ENST00000625514 PHF8Q9UPP1 1060 aa21.18■□□□□ 0.98
KCNQ2-209ENST00000625514 INSRP06213 1382 aa21.18■□□□□ 0.98
KCNQ2-209ENST00000625514 IL13P35225 146 aa21.17■□□□□ 0.98
KCNQ2-209ENST00000625514 KIF20BQ96Q89 1820 aa21.17■□□□□ 0.98
KCNQ2-209ENST00000625514 FAM83GA6ND36 823 aa21.17■□□□□ 0.98
KCNQ2-209ENST00000625514 ANP32EQ9BTT0 268 aa21.17■□□□□ 0.98
KCNQ2-209ENST00000625514 TRIM35Q9UPQ4 493 aa21.17■□□□□ 0.98
KCNQ2-209ENST00000625514 PSME1Q06323 249 aa21.16■□□□□ 0.98
KCNQ2-209ENST00000625514 SULT6B1Q6IMI4 303 aa21.16■□□□□ 0.98
KCNQ2-209ENST00000625514 COL3A1P02461 1466 aaPredicted RBP21.16■□□□□ 0.98
KCNQ2-209ENST00000625514 RSPH6AQ9H0K4 717 aa21.16■□□□□ 0.98
KCNQ2-209ENST00000625514 EIF4A2Q14240 407 aaKnown RBP21.15■□□□□ 0.98
KCNQ2-209ENST00000625514 TNNQ9UQP3 1299 aa21.15■□□□□ 0.98
KCNQ2-209ENST00000625514 KDM4FA0A1W2PPD8 638 aa21.15■□□□□ 0.98
KCNQ2-209ENST00000625514 CANXP27824 592 aaKnown RBP21.15■□□□□ 0.98
KCNQ2-209ENST00000625514 AMPHP49418 695 aa21.15■□□□□ 0.98
KCNQ2-209ENST00000625514 MAP3K19Q56UN5 1328 aa21.14■□□□□ 0.98
KCNQ2-209ENST00000625514 ELL2O00472 640 aaPredicted RBP21.14■□□□□ 0.97
KCNQ2-209ENST00000625514 CLUAP1Q96AJ1 413 aa21.14■□□□□ 0.97
KCNQ2-209ENST00000625514 TRMT2AQ8IZ69 625 aaKnown RBP21.14■□□□□ 0.97
KCNQ2-209ENST00000625514 NEFMP07197 916 aa21.13■□□□□ 0.97
KCNQ2-209ENST00000625514 PNPLA6Q8IY17 1366 aa21.13■□□□□ 0.97
KCNQ2-209ENST00000625514 TCERG1O14776 1098 aaKnown RBP21.12■□□□□ 0.97
KCNQ2-209ENST00000625514 ITSN1Q15811 1721 aa21.11■□□□□ 0.97
KCNQ2-209ENST00000625514 FCHSD2O94868 740 aa21.11■□□□□ 0.97
KCNQ2-209ENST00000625514 EXOSC9Q06265 439 aaKnown RBP21.11■□□□□ 0.97
KCNQ2-209ENST00000625514 PANK1Q8TE04 598 aa21.1■□□□□ 0.97
KCNQ2-209ENST00000625514 USHBP1Q8N6Y0 703 aa21.1■□□□□ 0.97
KCNQ2-209ENST00000625514 XRN1Q8IZH2 1706 aaKnown RBP21.09■□□□□ 0.97
KCNQ2-209ENST00000625514 IQSEC2Q5JU85 1478 aa21.09■□□□□ 0.97
KCNQ2-209ENST00000625514 ADGRB2O60241 1585 aa21.08■□□□□ 0.96
KCNQ2-209ENST00000625514 PIK3R4Q99570 1358 aa21.07■□□□□ 0.96
KCNQ2-209ENST00000625514 ANKRD26Q9UPS8 1709 aa21.07■□□□□ 0.96
KCNQ2-209ENST00000625514 FANCIQ9NVI1 1328 aa21.07■□□□□ 0.96
KCNQ2-209ENST00000625514 ERICH6BQ5W0A0 696 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms