RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 RCAN3Q9UKA8 241 aa26.01■■□□□ 1.75
TREX1-205ENST00000625293 PPIP5K1Q6PFW1 1433 aa26■■□□□ 1.75
TREX1-205ENST00000625293 PIP4K2BP78356 416 aa26■■□□□ 1.75
TREX1-205ENST00000625293 NGEFQ8N5V2 710 aa26■■□□□ 1.75
TREX1-205ENST00000625293 KIF20BQ96Q89 1820 aa26■■□□□ 1.75
TREX1-205ENST00000625293 CFAP53Q96M91 514 aa26■■□□□ 1.75
TREX1-205ENST00000625293 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.99■■□□□ 1.75
TREX1-205ENST00000625293 APAF1O14727 1248 aa25.98■■□□□ 1.75
TREX1-205ENST00000625293 NUDT16Q96DE0 195 aaKnown RBP25.98■■□□□ 1.75
TREX1-205ENST00000625293 CDC42BPGQ6DT37 1551 aa25.98■■□□□ 1.75
TREX1-205ENST00000625293 COL3A1P02461 1466 aaPredicted RBP25.98■■□□□ 1.75
TREX1-205ENST00000625293 NKTRP30414 1462 aaKnown RBP25.98■■□□□ 1.75
TREX1-205ENST00000625293 RRP1P56182 461 aaKnown RBP25.97■■□□□ 1.75
TREX1-205ENST00000625293 PTCH1Q13635 1447 aa25.96■■□□□ 1.75
TREX1-205ENST00000625293 EDC4Q6P2E9 1401 aaKnown RBP25.96■■□□□ 1.75
TREX1-205ENST00000625293 TOM1O60784 492 aa25.95■■□□□ 1.75
TREX1-205ENST00000625293 GOLGA2Q08379 1002 aa25.95■■□□□ 1.75
TREX1-205ENST00000625293 DUSP27Q5VZP5 1158 aa25.95■■□□□ 1.75
TREX1-205ENST00000625293 CCDC61Q9Y6R9 512 aa25.95■■□□□ 1.75
TREX1-205ENST00000625293 PRR36Q9H6K5 1346 aa25.95■■□□□ 1.74
TREX1-205ENST00000625293 C14orf37Q86TY3 774 aa25.94■■□□□ 1.74
TREX1-205ENST00000625293 TRMT2AQ8IZ69 625 aaKnown RBP25.94■■□□□ 1.74
TREX1-205ENST00000625293 XRN1Q8IZH2 1706 aaKnown RBP25.94■■□□□ 1.74
TREX1-205ENST00000625293 MON2Q7Z3U7 1717 aa25.93■■□□□ 1.74
TREX1-205ENST00000625293 SLFN5Q08AF3 891 aa25.92■■□□□ 1.74
TREX1-205ENST00000625293 RUNDC1Q96C34 613 aa25.92■■□□□ 1.74
TREX1-205ENST00000625293 PNPLA6Q8IY17 1366 aa25.91■■□□□ 1.74
TREX1-205ENST00000625293 TOPAZ1Q8N9V7 1692 aa25.91■■□□□ 1.74
TREX1-205ENST00000625293 AKAP12Q02952 1782 aa25.9■■□□□ 1.74
TREX1-205ENST00000625293 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.87■■□□□ 1.73
TREX1-205ENST00000625293 PHF23Q9BUL5 403 aaPredicted RBP25.87■■□□□ 1.73
TREX1-205ENST00000625293 MSH6P52701 1360 aa25.87■■□□□ 1.73
TREX1-205ENST00000625293 NCBP3Q53F19 620 aaKnown RBP25.87■■□□□ 1.73
TREX1-205ENST00000625293 C19orf44Q9H6X5 657 aa25.86■■□□□ 1.73
TREX1-205ENST00000625293 SPINK5Q9NQ38 1064 aaPredicted RBP25.85■■□□□ 1.73
TREX1-205ENST00000625293 TSHZ2Q9NRE2 1034 aa25.85■■□□□ 1.73
TREX1-205ENST00000625293 ITSN1Q15811 1721 aa25.85■■□□□ 1.73
TREX1-205ENST00000625293 B4GALNT3Q6L9W6 998 aa25.84■■□□□ 1.73
TREX1-205ENST00000625293 ZNF692Q9BU19 519 aaPredicted RBP25.84■■□□□ 1.73
TREX1-205ENST00000625293 PLEKHG3A1L390 1219 aa25.83■■□□□ 1.73
TREX1-205ENST00000625293 E9PSI1 815 aa25.83■■□□□ 1.73
TREX1-205ENST00000625293 WWC1Q8IX03 1113 aa25.83■■□□□ 1.73
TREX1-205ENST00000625293 TCP11L2Q8N4U5 519 aa25.83■■□□□ 1.73
TREX1-205ENST00000625293 NRKQ7Z2Y5 1582 aa25.82■■□□□ 1.72
TREX1-205ENST00000625293 U2AF1L5P0DN76 240 aaPredicted RBP25.82■■□□□ 1.72
TREX1-205ENST00000625293 U2AF1Q01081 240 aaKnown RBP eCLIP25.82■■□□□ 1.72
TREX1-205ENST00000625293 NME9Q86XW9 330 aa25.82■■□□□ 1.72
TREX1-205ENST00000625293 SLAIN2Q9P270 581 aa25.82■■□□□ 1.72
TREX1-205ENST00000625293 NCOA3Q9Y6Q9 1424 aa25.81■■□□□ 1.72
TREX1-205ENST00000625293 AATKQ6ZMQ8 1374 aa25.81■■□□□ 1.72
TREX1-205ENST00000625293 CCDC27Q2M243 656 aa25.81■■□□□ 1.72
TREX1-205ENST00000625293 POLKQ9UBT6 870 aa25.8■■□□□ 1.72
TREX1-205ENST00000625293 ATF3P18847 181 aa25.79■■□□□ 1.72
TREX1-205ENST00000625293 HSPA1LP34931 641 aa25.79■■□□□ 1.72
TREX1-205ENST00000625293 PLEKHF1Q96S99 279 aa25.79■■□□□ 1.72
TREX1-205ENST00000625293 DIAPH1O60610 1272 aaKnown RBP25.77■■□□□ 1.72
TREX1-205ENST00000625293 CADPS2Q86UW7 1296 aa25.76■■□□□ 1.71
TREX1-205ENST00000625293 ZRANB1Q9UGI0 708 aa25.76■■□□□ 1.71
TREX1-205ENST00000625293 ACEP12821 1306 aa25.75■■□□□ 1.71
TREX1-205ENST00000625293 USP6P35125 1406 aa25.75■■□□□ 1.71
TREX1-205ENST00000625293 RRP7AQ9Y3A4 280 aaKnown RBP25.75■■□□□ 1.71
TREX1-205ENST00000625293 NALCNQ8IZF0 1738 aa25.75■■□□□ 1.71
TREX1-205ENST00000625293 SSH2Q76I76 1423 aa25.75■■□□□ 1.71
TREX1-205ENST00000625293 ADGRL3Q9HAR2 1447 aa25.75■■□□□ 1.71
TREX1-205ENST00000625293 WDR63Q8IWG1 891 aa25.74■■□□□ 1.71
TREX1-205ENST00000625293 CDK12Q9NYV4 1490 aaPredicted RBP25.74■■□□□ 1.71
TREX1-205ENST00000625293 EXOC6Q8TAG9 804 aa25.74■■□□□ 1.71
TREX1-205ENST00000625293 TTC21BQ7Z4L5 1316 aa25.73■■□□□ 1.71
TREX1-205ENST00000625293 U2SURPO15042 1029 aaKnown RBP25.73■■□□□ 1.71
TREX1-205ENST00000625293 FBLN1P23142 703 aa25.73■■□□□ 1.71
TREX1-205ENST00000625293 COG3Q96JB2 828 aa25.73■■□□□ 1.71
TREX1-205ENST00000625293 PLIN1O60240 522 aa25.72■■□□□ 1.71
TREX1-205ENST00000625293 OVOS2A0A0J9YW53 1432 aa25.71■■□□□ 1.71
TREX1-205ENST00000625293 OVOS2Q6IE36 1432 aa25.71■■□□□ 1.71
TREX1-205ENST00000625293 NUTM2FA1L443 756 aa25.71■■□□□ 1.71
TREX1-205ENST00000625293 MAP2P11137 1827 aaKnown RBP25.7■■□□□ 1.71
TREX1-205ENST00000625293 ANKARQ7Z5J8 1434 aa25.7■■□□□ 1.7
TREX1-205ENST00000625293 NEUROD2Q15784 382 aa25.7■■□□□ 1.7
TREX1-205ENST00000625293 CCDC136Q96JN2 1154 aa25.69■■□□□ 1.7
TREX1-205ENST00000625293 EMILIN1Q9Y6C2 1016 aa25.69■■□□□ 1.7
TREX1-205ENST00000625293 ROBO1Q9Y6N7 1651 aa25.68■■□□□ 1.7
TREX1-205ENST00000625293 MST1RQ04912 1400 aa25.68■■□□□ 1.7
TREX1-205ENST00000625293 FMN2Q9NZ56 1722 aa25.66■■□□□ 1.7
TREX1-205ENST00000625293 TMPOP42166 694 aaKnown RBP25.66■■□□□ 1.7
TREX1-205ENST00000625293 BRINP3Q76B58 766 aa25.66■■□□□ 1.7
TREX1-205ENST00000625293 FCHSD2O94868 740 aa25.65■■□□□ 1.7
TREX1-205ENST00000625293 IL13P35225 146 aa25.65■■□□□ 1.7
TREX1-205ENST00000625293 DDX17Q92841 729 aaKnown RBP25.65■■□□□ 1.7
TREX1-205ENST00000625293 PNNQ9H307 717 aaKnown RBP25.65■■□□□ 1.7
TREX1-205ENST00000625293 DCCP43146 1447 aa25.65■■□□□ 1.7
TREX1-205ENST00000625293 ORAI2Q96SN7 254 aa25.64■■□□□ 1.7
TREX1-205ENST00000625293 USP31Q70CQ4 1352 aa25.64■■□□□ 1.69
TREX1-205ENST00000625293 RSPH6AQ9H0K4 717 aa25.64■■□□□ 1.69
TREX1-205ENST00000625293 TTC21AQ8NDW8 1320 aa25.63■■□□□ 1.69
TREX1-205ENST00000625293 MAPK8IP3Q9UPT6 1336 aa25.63■■□□□ 1.69
TREX1-205ENST00000625293 PPM1GO15355 546 aaPredicted RBP25.63■■□□□ 1.69
TREX1-205ENST00000625293 CRBNQ96SW2 442 aa25.63■■□□□ 1.69
TREX1-205ENST00000625293 C20orf194Q5TEA3 1177 aa25.62■■□□□ 1.69
TREX1-205ENST00000625293 TRIM35Q9UPQ4 493 aa25.62■■□□□ 1.69
TREX1-205ENST00000625293 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms