RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 PNISRQ8TF01 805 aaKnown RBP15.91■□□□□ 0.14
LINC00963-220ENST00000625171 MRS2Q9HD23 443 aa15.91■□□□□ 0.14
LINC00963-220ENST00000625171 SSH2Q76I76 1423 aa15.91■□□□□ 0.14
LINC00963-220ENST00000625171 ZNF772Q68DY9 489 aaPredicted RBP15.9■□□□□ 0.14
LINC00963-220ENST00000625171 NALCNQ8IZF0 1738 aa15.89■□□□□ 0.13
LINC00963-220ENST00000625171 CCDC184Q52MB2 194 aa15.89■□□□□ 0.13
LINC00963-220ENST00000625171 ACEP12821 1306 aa15.89■□□□□ 0.13
LINC00963-220ENST00000625171 ITSN1Q15811 1721 aa15.88■□□□□ 0.13
LINC00963-220ENST00000625171 MORC1Q86VD1 984 aa15.88■□□□□ 0.13
LINC00963-220ENST00000625171 TTC21AQ8NDW8 1320 aa15.88■□□□□ 0.13
LINC00963-220ENST00000625171 LRP6O75581 1613 aa15.87■□□□□ 0.13
LINC00963-220ENST00000625171 AHDC1Q5TGY3 1603 aaPredicted RBP15.87■□□□□ 0.13
LINC00963-220ENST00000625171 USP6P35125 1406 aa15.87■□□□□ 0.13
LINC00963-220ENST00000625171 CADPS2Q86UW7 1296 aa15.87■□□□□ 0.13
LINC00963-220ENST00000625171 AKAP12Q02952 1782 aa15.87■□□□□ 0.13
LINC00963-220ENST00000625171 MON2Q7Z3U7 1717 aa15.86■□□□□ 0.13
LINC00963-220ENST00000625171 CDK12Q9NYV4 1490 aaPredicted RBP15.85■□□□□ 0.13
LINC00963-220ENST00000625171 UPF1Q92900 1129 aaKnown RBP eCLIP15.85■□□□□ 0.132e-6■■■□□ 15.7
LINC00963-220ENST00000625171 SHPRHQ149N8 1683 aa15.85■□□□□ 0.13
LINC00963-220ENST00000625171 MEX3CQ5U5Q3 659 aaKnown RBP15.84■□□□□ 0.13
LINC00963-220ENST00000625171 PHF8Q9UPP1 1060 aa15.84■□□□□ 0.13
LINC00963-220ENST00000625171 TTC21BQ7Z4L5 1316 aa15.84■□□□□ 0.13
LINC00963-220ENST00000625171 AATKQ6ZMQ8 1374 aa15.84■□□□□ 0.13
LINC00963-220ENST00000625171 USP31Q70CQ4 1352 aa15.84■□□□□ 0.13
LINC00963-220ENST00000625171 NGDNQ8NEJ9 315 aaKnown RBP15.82■□□□□ 0.12
LINC00963-220ENST00000625171 ANKRD26Q9UPS8 1709 aa15.82■□□□□ 0.12
LINC00963-220ENST00000625171 ATF3P18847 181 aa15.81■□□□□ 0.12
LINC00963-220ENST00000625171 RXRBP28702 533 aa15.81■□□□□ 0.12
LINC00963-220ENST00000625171 C1orf167Q5SNV9 1468 aa15.81■□□□□ 0.12
LINC00963-220ENST00000625171 NRKQ7Z2Y5 1582 aa15.81■□□□□ 0.12
LINC00963-220ENST00000625171 C14orf37Q86TY3 774 aa15.81■□□□□ 0.12
LINC00963-220ENST00000625171 GGNBP2Q9H3C7 697 aa15.81■□□□□ 0.12
LINC00963-220ENST00000625171 PNPLA6Q8IY17 1366 aa15.8■□□□□ 0.12
LINC00963-220ENST00000625171 MST1RQ04912 1400 aa15.79■□□□□ 0.12
LINC00963-220ENST00000625171 NUTM2FA1L443 756 aa15.79■□□□□ 0.12
LINC00963-220ENST00000625171 CENPBP07199 599 aaPredicted RBP15.79■□□□□ 0.12
LINC00963-220ENST00000625171 PMFBP1Q8TBY8 1022 aa15.79■□□□□ 0.12
LINC00963-220ENST00000625171 OVOS2A0A0J9YW53 1432 aa15.78■□□□□ 0.12
LINC00963-220ENST00000625171 OVOS2Q6IE36 1432 aa15.78■□□□□ 0.12
LINC00963-220ENST00000625171 KIF20BQ96Q89 1820 aa15.78■□□□□ 0.12
LINC00963-220ENST00000625171 COG3Q96JB2 828 aa15.78■□□□□ 0.12
LINC00963-220ENST00000625171 RGPD8O14715 1765 aaPredicted RBP15.77■□□□□ 0.12
LINC00963-220ENST00000625171 CNGB1Q14028 1251 aaPredicted RBP15.77■□□□□ 0.12
LINC00963-220ENST00000625171 ESCO1Q5FWF5 840 aa15.77■□□□□ 0.12
LINC00963-220ENST00000625171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.77■□□□□ 0.12
LINC00963-220ENST00000625171 SMG6Q86US8 1419 aaKnown RBP15.77■□□□□ 0.11
LINC00963-220ENST00000625171 MTHFSP49914 203 aa15.76■□□□□ 0.11
LINC00963-220ENST00000625171 BRINP3Q76B58 766 aa15.76■□□□□ 0.11
LINC00963-220ENST00000625171 NME9Q86XW9 330 aa15.76■□□□□ 0.11
LINC00963-220ENST00000625171 FAM9BQ8IZU0 186 aa15.76■□□□□ 0.11
LINC00963-220ENST00000625171 CFAP53Q96M91 514 aa15.76■□□□□ 0.11
LINC00963-220ENST00000625171 KIF1AQ12756 1690 aa15.76■□□□□ 0.11
LINC00963-220ENST00000625171 USP54Q70EL1 1684 aa15.76■□□□□ 0.11
LINC00963-220ENST00000625171 NCBP3Q53F19 620 aaKnown RBP15.74■□□□□ 0.11
LINC00963-220ENST00000625171 NGEFQ8N5V2 710 aa15.74■□□□□ 0.11
LINC00963-220ENST00000625171 ORAI2Q96SN7 254 aa15.74■□□□□ 0.11
LINC00963-220ENST00000625171 POLKQ9UBT6 870 aa15.74■□□□□ 0.11
LINC00963-220ENST00000625171 PSME1Q06323 249 aa15.73■□□□□ 0.11
LINC00963-220ENST00000625171 KIF24Q5T7B8 1368 aa15.73■□□□□ 0.11
LINC00963-220ENST00000625171 AFF2P51816 1311 aa15.72■□□□□ 0.11
LINC00963-220ENST00000625171 YTHDC1Q96MU7 727 aaKnown RBP15.72■□□□□ 0.11
LINC00963-220ENST00000625171 ZBED9Q6R2W3 1325 aa15.71■□□□□ 0.11
LINC00963-220ENST00000625171 BLMP54132 1417 aaPredicted RBP15.71■□□□□ 0.11
LINC00963-220ENST00000625171 ADAMTS8Q9UP79 889 aa15.71■□□□□ 0.11
LINC00963-220ENST00000625171 SBNO1A3KN83 1393 aa15.71■□□□□ 0.11
LINC00963-220ENST00000625171 SRCAPQ6ZRS2 3230 aa15.7■□□□□ 0.1
LINC00963-220ENST00000625171 NHSL1Q5SYE7 1610 aa15.7■□□□□ 0.1
LINC00963-220ENST00000625171 NUTM2BA6NNL0 878 aaPredicted RBP15.7■□□□□ 0.1
LINC00963-220ENST00000625171 NUTM2EB1AL46 878 aaPredicted RBP15.7■□□□□ 0.1
LINC00963-220ENST00000625171 WDR43Q15061 677 aaKnown RBP eCLIP15.7■□□□□ 0.1
LINC00963-220ENST00000625171 NUTM2AQ8IVF1 878 aaPredicted RBP15.7■□□□□ 0.1
LINC00963-220ENST00000625171 LRRC59Q96AG4 307 aaKnown RBP15.7■□□□□ 0.1
LINC00963-220ENST00000625171 NPHP3Q7Z494 1330 aa15.69■□□□□ 0.1
LINC00963-220ENST00000625171 FOXO3O43524 673 aa15.69■□□□□ 0.1
LINC00963-220ENST00000625171 TNNT2P45379 298 aaPredicted RBP15.69■□□□□ 0.1
LINC00963-220ENST00000625171 RBM6P78332 1123 aaKnown RBP15.69■□□□□ 0.1
LINC00963-220ENST00000625171 HNRNPUQ00839 825 aaKnown RBP eCLIP15.69■□□□□ 0.12e-9■■■□□ 15
LINC00963-220ENST00000625171 KRT28Q7Z3Y7 464 aa15.69■□□□□ 0.1
LINC00963-220ENST00000625171 ZRANB1Q9UGI0 708 aa15.69■□□□□ 0.1
LINC00963-220ENST00000625171 NUDCQ9Y266 331 aa15.69■□□□□ 0.1
LINC00963-220ENST00000625171 COL3A1P02461 1466 aaPredicted RBP15.69■□□□□ 0.1
LINC00963-220ENST00000625171 RGS12O14924 1447 aa15.68■□□□□ 0.1
LINC00963-220ENST00000625171 NLRP6P59044 892 aa15.68■□□□□ 0.1
LINC00963-220ENST00000625171 ABTB2Q8N961 1025 aa15.68■□□□□ 0.1
LINC00963-220ENST00000625171 PIK3C2AO00443 1686 aa15.67■□□□□ 0.1
LINC00963-220ENST00000625171 KCNH5Q8NCM2 988 aa15.67■□□□□ 0.1
LINC00963-220ENST00000625171 DIAPH1O60610 1272 aaKnown RBP15.65■□□□□ 0.1
LINC00963-220ENST00000625171 PNNQ9H307 717 aaKnown RBP15.65■□□□□ 0.1
LINC00963-220ENST00000625171 QTRT2Q9H974 415 aaKnown RBP15.65■□□□□ 0.1
LINC00963-220ENST00000625171 TRPM3Q9HCF6 1732 aaPredicted RBP15.65■□□□□ 0.1
LINC00963-220ENST00000625171 USP19O94966 1318 aa15.65■□□□□ 0.1
LINC00963-220ENST00000625171 SOS2Q07890 1332 aaPredicted RBP15.65■□□□□ 0.1
LINC00963-220ENST00000625171 PDE3BQ13370 1112 aa15.64■□□□□ 0.09
LINC00963-220ENST00000625171 NGLY1Q96IV0 654 aa15.64■□□□□ 0.09
LINC00963-220ENST00000625171 C8orf37Q96NL8 207 aa15.64■□□□□ 0.09
LINC00963-220ENST00000625171 MAP2P11137 1827 aaKnown RBP15.64■□□□□ 0.09
LINC00963-220ENST00000625171 FCHSD2O94868 740 aa15.63■□□□□ 0.09
LINC00963-220ENST00000625171 IL13P35225 146 aa15.63■□□□□ 0.09
LINC00963-220ENST00000625171 PXDNQ92626 1479 aa15.63■□□□□ 0.09
LINC00963-220ENST00000625171 PAK3O75914 559 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms