RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 CCDC158Q5M9N0 1113 aa7.51□□□□□ -1.21
CDKL5-205ENST00000623535 ABTB2Q8N961 1025 aa7.51□□□□□ -1.21
CDKL5-205ENST00000623535 SPATA32Q96LK8 384 aa7.51□□□□□ -1.21
CDKL5-205ENST00000623535 MTMR7Q9Y216 660 aa7.51□□□□□ -1.21
CDKL5-205ENST00000623535 SMARCA2P51531 1590 aa7.51□□□□□ -1.21
CDKL5-205ENST00000623535 NUP155O75694 1391 aa7.51□□□□□ -1.21
CDKL5-205ENST00000623535 HSP90AA2PQ14568 343 aaPredicted RBP7.51□□□□□ -1.21
CDKL5-205ENST00000623535 NEUROD6Q96NK8 337 aa7.51□□□□□ -1.21
CDKL5-205ENST00000623535 MINK1Q8N4C8 1332 aaPredicted RBP7.51□□□□□ -1.21
CDKL5-205ENST00000623535 CENPQQ7L2Z9 268 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-205ENST00000623535 UBAP1LF5GYI3 381 aa7.5□□□□□ -1.21
CDKL5-205ENST00000623535 CABP4P57796 275 aa7.5□□□□□ -1.21
CDKL5-205ENST00000623535 CCDC191Q8NCU4 936 aa7.5□□□□□ -1.21
CDKL5-205ENST00000623535 STARD3NLO95772 234 aa7.5□□□□□ -1.21
CDKL5-205ENST00000623535 STIM1Q13586 685 aa7.5□□□□□ -1.21
CDKL5-205ENST00000623535 TRIM5Q9C035 493 aa7.5□□□□□ -1.21
CDKL5-205ENST00000623535 RILPL2Q969X0 211 aa7.5□□□□□ -1.21
CDKL5-205ENST00000623535 ARHGAP35Q9NRY4 1499 aa7.5□□□□□ -1.21
CDKL5-205ENST00000623535 APBB1IPQ7Z5R6 666 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-205ENST00000623535 NINLQ9Y2I6 1382 aa7.5□□□□□ -1.21
CDKL5-205ENST00000623535 ST5P78524 1137 aa7.49□□□□□ -1.21
CDKL5-205ENST00000623535 CCAR2Q8N163 923 aaKnown RBP7.49□□□□□ -1.21
CDKL5-205ENST00000623535 PHLDB1Q86UU1 1377 aa7.49□□□□□ -1.21
CDKL5-205ENST00000623535 FAM177BA6PVY3 158 aa7.49□□□□□ -1.21
CDKL5-205ENST00000623535 UTP14AQ9BVJ6 771 aaKnown RBP7.49□□□□□ -1.21
CDKL5-205ENST00000623535 ABCC8Q09428 1581 aa7.49□□□□□ -1.21
CDKL5-205ENST00000623535 DHX57Q6P158 1386 aaKnown RBP7.49□□□□□ -1.21
CDKL5-205ENST00000623535 NLRP13Q86W25 1043 aa7.49□□□□□ -1.21
CDKL5-205ENST00000623535 CUX2O14529 1486 aa7.49□□□□□ -1.21
CDKL5-205ENST00000623535 PPM1EQ8WY54 764 aa7.49□□□□□ -1.21
CDKL5-205ENST00000623535 GTF3C3Q9Y5Q9 886 aa7.49□□□□□ -1.21
CDKL5-205ENST00000623535 CPLX3Q8WVH0 158 aa7.49□□□□□ -1.21
CDKL5-205ENST00000623535 CCDC181Q5TID7 509 aa7.49□□□□□ -1.21
CDKL5-205ENST00000623535 OLFM4Q6UX06 510 aa7.49□□□□□ -1.21
CDKL5-205ENST00000623535 JDP2Q8WYK2 163 aa7.49□□□□□ -1.21
CDKL5-205ENST00000623535 TRAF1Q13077 416 aa7.48□□□□□ -1.21
CDKL5-205ENST00000623535 CABP2Q9NPB3 220 aa7.48□□□□□ -1.21
CDKL5-205ENST00000623535 ANKIB1Q9P2G1 1089 aa7.48□□□□□ -1.21
CDKL5-205ENST00000623535 ANKRD62A6NC57 917 aa7.48□□□□□ -1.21
CDKL5-205ENST00000623535 HMGB3O15347 200 aaKnown RBP7.48□□□□□ -1.21
CDKL5-205ENST00000623535 TXNDC2Q86VQ3 553 aa7.48□□□□□ -1.21
CDKL5-205ENST00000623535 CARMIL1Q5VZK9 1371 aa7.48□□□□□ -1.21
CDKL5-205ENST00000623535 OGFOD1Q8N543 542 aa7.48□□□□□ -1.21
CDKL5-205ENST00000623535 CCDC57Q2TAC2 916 aa7.48□□□□□ -1.21
CDKL5-205ENST00000623535 SEC63Q9UGP8 760 aaKnown RBP7.48□□□□□ -1.21
CDKL5-205ENST00000623535 KMT5BQ4FZB7 885 aa7.48□□□□□ -1.21
CDKL5-205ENST00000623535 PKD2Q13563 968 aa7.47□□□□□ -1.21
CDKL5-205ENST00000623535 PTPRGP23470 1445 aa7.47□□□□□ -1.21
CDKL5-205ENST00000623535 PPP4R3BQ5MIZ7 849 aa7.47□□□□□ -1.21
CDKL5-205ENST00000623535 NOD1Q9Y239 953 aa7.47□□□□□ -1.21
CDKL5-205ENST00000623535 HIP1O00291 1037 aa7.47□□□□□ -1.21
CDKL5-205ENST00000623535 NLRP6P59044 892 aa7.47□□□□□ -1.21
CDKL5-205ENST00000623535 GAS2L2Q8NHY3 880 aa7.47□□□□□ -1.21
CDKL5-205ENST00000623535 ANO2Q9NQ90 1003 aa7.47□□□□□ -1.21
CDKL5-205ENST00000623535 SOGA1O94964 1423 aa7.47□□□□□ -1.21
CDKL5-205ENST00000623535 TTC39AQ5SRH9 613 aa7.47□□□□□ -1.21
CDKL5-205ENST00000623535 DHX37Q8IY37 1157 aaKnown RBP7.47□□□□□ -1.21
CDKL5-205ENST00000623535 NAT10Q9H0A0 1025 aaKnown RBP7.46□□□□□ -1.21
CDKL5-205ENST00000623535 REC8O95072 547 aa7.46□□□□□ -1.21
CDKL5-205ENST00000623535 SMC2O95347 1197 aa7.46□□□□□ -1.21
CDKL5-205ENST00000623535 FKBP5Q13451 457 aaPredicted RBP7.46□□□□□ -1.21
CDKL5-205ENST00000623535 CAVIN4Q5BKX8 364 aa7.46□□□□□ -1.21
CDKL5-205ENST00000623535 ELMSAN1Q6PJG2 1045 aa7.46□□□□□ -1.21
CDKL5-205ENST00000623535 SMARCE1Q969G3 411 aa7.46□□□□□ -1.21
CDKL5-205ENST00000623535 COG6Q9Y2V7 657 aa7.46□□□□□ -1.22
CDKL5-205ENST00000623535 TCIRG1Q13488 830 aa7.46□□□□□ -1.22
CDKL5-205ENST00000623535 RIOK3O14730 519 aaKnown RBP7.46□□□□□ -1.22
CDKL5-205ENST00000623535 CCDC146Q8IYE0 955 aa7.46□□□□□ -1.22
CDKL5-205ENST00000623535 A0A087WZG4 1122 aa7.46□□□□□ -1.22
CDKL5-205ENST00000623535 CABP5Q9NP86 173 aa7.46□□□□□ -1.22
CDKL5-205ENST00000623535 TTC21AQ8NDW8 1320 aa7.46□□□□□ -1.22
CDKL5-205ENST00000623535 PNISRQ8TF01 805 aaKnown RBP7.46□□□□□ -1.22
CDKL5-205ENST00000623535 TRAK1Q9UPV9 953 aa7.45□□□□□ -1.22
CDKL5-205ENST00000623535 CCDC144AA2RUR9 1427 aa7.45□□□□□ -1.22
CDKL5-205ENST00000623535 RABEP1Q15276 862 aa7.45□□□□□ -1.22
CDKL5-205ENST00000623535 DDX54Q8TDD1 881 aaKnown RBP7.45□□□□□ -1.22
CDKL5-205ENST00000623535 DDX23Q9BUQ8 820 aaKnown RBP7.45□□□□□ -1.22
CDKL5-205ENST00000623535 ZHX3Q9H4I2 956 aa7.45□□□□□ -1.22
CDKL5-205ENST00000623535 HOOK2Q96ED9 719 aa7.45□□□□□ -1.22
CDKL5-205ENST00000623535 CCDC73Q6ZRK6 1079 aa7.45□□□□□ -1.22
CDKL5-205ENST00000623535 JPH4Q96JJ6 628 aa7.45□□□□□ -1.22
CDKL5-205ENST00000623535 CCDC91Q7Z6B0 441 aa7.45□□□□□ -1.22
CDKL5-205ENST00000623535 EP400NLQ6ZTU2 488 aa7.45□□□□□ -1.22
CDKL5-205ENST00000623535 DZIP1LQ8IYY4 767 aaKnown RBP7.44□□□□□ -1.22
CDKL5-205ENST00000623535 XPCQ01831 940 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-205ENST00000623535 AIMP1Q12904 312 aaKnown RBP7.44□□□□□ -1.22
CDKL5-205ENST00000623535 TSPYL4Q9UJ04 414 aa7.44□□□□□ -1.22
CDKL5-205ENST00000623535 ANKRD18BA2A2Z9 1011 aa7.44□□□□□ -1.22
CDKL5-205ENST00000623535 PSMA5P28066 241 aa7.44□□□□□ -1.22
CDKL5-205ENST00000623535 FILIP1LQ4L180 1135 aa7.44□□□□□ -1.22
CDKL5-205ENST00000623535 NOL7Q9UMY1 257 aaKnown RBP7.44□□□□□ -1.22
CDKL5-205ENST00000623535 GOLGA6L3A6NEY3 463 aa7.44□□□□□ -1.22
CDKL5-205ENST00000623535 FERP16591 822 aa7.44□□□□□ -1.22
CDKL5-205ENST00000623535 TNPO1Q92973 898 aaKnown RBP7.44□□□□□ -1.22
CDKL5-205ENST00000623535 HAUS2Q9NVX0 235 aa7.44□□□□□ -1.22
CDKL5-205ENST00000623535 GPR162Q16538 588 aa7.44□□□□□ -1.22
CDKL5-205ENST00000623535 API5Q9BZZ5 524 aaKnown RBP7.44□□□□□ -1.22
CDKL5-205ENST00000623535 HLA-DOAP06340 250 aa7.44□□□□□ -1.22
CDKL5-205ENST00000623535 RFC4P35249 363 aa7.44□□□□□ -1.22
CDKL5-205ENST00000623535 ERCC4Q92889 916 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms