RNA–Protein interactions for RNA: ENST00000623529.1

LINC01561-202, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

Gene LINC01561, Length 2,160 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-202ENST00000623529 NPC1L1Q9UHC9 1359 aa13.65□□□□□ -0.22
LINC01561-202ENST00000623529 UBE2Q2Q8WVN8 375 aa13.65□□□□□ -0.22
LINC01561-202ENST00000623529 LRRC7Q96NW7 1537 aa13.64□□□□□ -0.23
LINC01561-202ENST00000623529 GGNBP2Q9H3C7 697 aa13.64□□□□□ -0.23
LINC01561-202ENST00000623529 ESCO1Q5FWF5 840 aa13.64□□□□□ -0.23
LINC01561-202ENST00000623529 ZNF692Q9BU19 519 aaPredicted RBP13.64□□□□□ -0.23
LINC01561-202ENST00000623529 TSHZ2Q9NRE2 1034 aa13.64□□□□□ -0.23
LINC01561-202ENST00000623529 PODXL2Q9NZ53 605 aa13.64□□□□□ -0.23
LINC01561-202ENST00000623529 ZRANB1Q9UGI0 708 aa13.64□□□□□ -0.23
LINC01561-202ENST00000623529 CGNL1Q0VF96 1302 aa13.63□□□□□ -0.23
LINC01561-202ENST00000623529 FMN2Q9NZ56 1722 aa13.63□□□□□ -0.23
LINC01561-202ENST00000623529 CDC42BPGQ6DT37 1551 aa13.63□□□□□ -0.23
LINC01561-202ENST00000623529 ANKARQ7Z5J8 1434 aa13.63□□□□□ -0.23
LINC01561-202ENST00000623529 TNNT2P45379 298 aaPredicted RBP13.62□□□□□ -0.23
LINC01561-202ENST00000623529 NGDNQ8NEJ9 315 aaKnown RBP13.62□□□□□ -0.23
LINC01561-202ENST00000623529 MYBBP1AQ9BQG0 1328 aaKnown RBP13.62□□□□□ -0.23
LINC01561-202ENST00000623529 NCOA3Q9Y6Q9 1424 aa13.62□□□□□ -0.23
LINC01561-202ENST00000623529 PPP2R1AP30153 589 aa13.62□□□□□ -0.23
LINC01561-202ENST00000623529 NME9Q86XW9 330 aa13.62□□□□□ -0.23
LINC01561-202ENST00000623529 PHF8Q9UPP1 1060 aa13.62□□□□□ -0.23
LINC01561-202ENST00000623529 XIRP1Q702N8 1843 aaKnown RBP13.62□□□□□ -0.23
LINC01561-202ENST00000623529 TOPAZ1Q8N9V7 1692 aa13.61□□□□□ -0.23
LINC01561-202ENST00000623529 ATF3P18847 181 aa13.61□□□□□ -0.23
LINC01561-202ENST00000623529 FBLN1P23142 703 aa13.61□□□□□ -0.23
LINC01561-202ENST00000623529 KLHL34Q8N239 644 aa13.61□□□□□ -0.23
LINC01561-202ENST00000623529 MRS2Q9HD23 443 aa13.61□□□□□ -0.23
LINC01561-202ENST00000623529 POLR3AO14802 1390 aaPredicted RBP13.61□□□□□ -0.23
LINC01561-202ENST00000623529 MORC1Q86VD1 984 aa13.61□□□□□ -0.23
LINC01561-202ENST00000623529 TTC21BQ7Z4L5 1316 aa13.59□□□□□ -0.23
LINC01561-202ENST00000623529 FOXO3O43524 673 aa13.59□□□□□ -0.23
LINC01561-202ENST00000623529 SSH2Q76I76 1423 aa13.59□□□□□ -0.23
LINC01561-202ENST00000623529 UPF1Q92900 1129 aaKnown RBP eCLIP13.59□□□□□ -0.23
LINC01561-202ENST00000623529 C1orf167Q5SNV9 1468 aa13.59□□□□□ -0.23
LINC01561-202ENST00000623529 USP6P35125 1406 aa13.58□□□□□ -0.23
LINC01561-202ENST00000623529 EDC4Q6P2E9 1401 aaKnown RBP13.58□□□□□ -0.23
LINC01561-202ENST00000623529 CADPS2Q86UW7 1296 aa13.58□□□□□ -0.24
LINC01561-202ENST00000623529 NLRP13Q86W25 1043 aa13.58□□□□□ -0.24
LINC01561-202ENST00000623529 MST1RQ04912 1400 aa13.58□□□□□ -0.24
LINC01561-202ENST00000623529 DDX17Q92841 729 aaKnown RBP13.58□□□□□ -0.24
LINC01561-202ENST00000623529 MSH6P52701 1360 aa13.57□□□□□ -0.24
LINC01561-202ENST00000623529 AKAP12Q02952 1782 aa13.57□□□□□ -0.24
LINC01561-202ENST00000623529 XPCQ01831 940 aaPredicted RBP13.57□□□□□ -0.24
LINC01561-202ENST00000623529 PNISRQ8TF01 805 aaKnown RBP13.56□□□□□ -0.24
LINC01561-202ENST00000623529 FAM9BQ8IZU0 186 aa13.56□□□□□ -0.24
LINC01561-202ENST00000623529 SLAIN2Q9P270 581 aa13.56□□□□□ -0.24
LINC01561-202ENST00000623529 DCCP43146 1447 aa13.55□□□□□ -0.24
LINC01561-202ENST00000623529 PSME1Q06323 249 aa13.55□□□□□ -0.24
LINC01561-202ENST00000623529 MON2Q7Z3U7 1717 aa13.55□□□□□ -0.24
LINC01561-202ENST00000623529 BRD4O60885 1362 aaPredicted RBP13.55□□□□□ -0.24
LINC01561-202ENST00000623529 NSD2O96028 1365 aa13.55□□□□□ -0.24
LINC01561-202ENST00000623529 MTHFSP49914 203 aa13.55□□□□□ -0.24
LINC01561-202ENST00000623529 ITSN1Q15811 1721 aa13.54□□□□□ -0.24
LINC01561-202ENST00000623529 NUTM2GQ5VZR2 741 aa13.54□□□□□ -0.24
LINC01561-202ENST00000623529 PAK3O75914 559 aaPredicted RBP13.54□□□□□ -0.24
LINC01561-202ENST00000623529 BRINP3Q76B58 766 aa13.52□□□□□ -0.24
LINC01561-202ENST00000623529 HOMEZQ8IX15 550 aa13.52□□□□□ -0.24
LINC01561-202ENST00000623529 KRT28Q7Z3Y7 464 aa13.52□□□□□ -0.25
LINC01561-202ENST00000623529 ABTB2Q8N961 1025 aa13.52□□□□□ -0.25
LINC01561-202ENST00000623529 COG3Q96JB2 828 aa13.52□□□□□ -0.25
LINC01561-202ENST00000623529 NRKQ7Z2Y5 1582 aa13.52□□□□□ -0.25
LINC01561-202ENST00000623529 POLKQ9UBT6 870 aa13.51□□□□□ -0.25
LINC01561-202ENST00000623529 TTC21AQ8NDW8 1320 aa13.51□□□□□ -0.25
LINC01561-202ENST00000623529 NLRP6P59044 892 aa13.51□□□□□ -0.25
LINC01561-202ENST00000623529 RRS1Q15050 365 aaKnown RBP13.49□□□□□ -0.25
LINC01561-202ENST00000623529 KIF20BQ96Q89 1820 aa13.49□□□□□ -0.25
LINC01561-202ENST00000623529 SENP3-EIF4A1A0A087X0R7 540 aa13.49□□□□□ -0.25
LINC01561-202ENST00000623529 SOX12O15370 315 aa13.49□□□□□ -0.25
LINC01561-202ENST00000623529 EMILIN1Q9Y6C2 1016 aa13.49□□□□□ -0.25
LINC01561-202ENST00000623529 ADAMTS8Q9UP79 889 aa13.48□□□□□ -0.25
LINC01561-202ENST00000623529 OVOS2A0A0J9YW53 1432 aa13.48□□□□□ -0.25
LINC01561-202ENST00000623529 OVOS2Q6IE36 1432 aa13.48□□□□□ -0.25
LINC01561-202ENST00000623529 USP31Q70CQ4 1352 aa13.48□□□□□ -0.25
LINC01561-202ENST00000623529 PPM1GO15355 546 aaPredicted RBP13.47□□□□□ -0.25
LINC01561-202ENST00000623529 ANKRD26Q9UPS8 1709 aa13.47□□□□□ -0.25
LINC01561-202ENST00000623529 PIK3C2AO00443 1686 aa13.47□□□□□ -0.25
LINC01561-202ENST00000623529 LMOD2Q6P5Q4 547 aa13.46□□□□□ -0.25
LINC01561-202ENST00000623529 MAP2P11137 1827 aaKnown RBP13.45□□□□□ -0.26
LINC01561-202ENST00000623529 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
LINC01561-202ENST00000623529 NPHP3Q7Z494 1330 aa13.45□□□□□ -0.26
LINC01561-202ENST00000623529 PNPLA6Q8IY17 1366 aa13.44□□□□□ -0.26
LINC01561-202ENST00000623529 KIF1AQ12756 1690 aa13.43□□□□□ -0.26
LINC01561-202ENST00000623529 MARF1Q9Y4F3 1742 aaKnown RBP13.43□□□□□ -0.26
LINC01561-202ENST00000623529 SOS2Q07890 1332 aaPredicted RBP13.43□□□□□ -0.26
LINC01561-202ENST00000623529 MAP3K19Q56UN5 1328 aa13.43□□□□□ -0.26
LINC01561-202ENST00000623529 HNRNPUQ00839 825 aaKnown RBP eCLIP13.42□□□□□ -0.26
LINC01561-202ENST00000623529 TRPM3Q9HCF6 1732 aaPredicted RBP13.42□□□□□ -0.26
LINC01561-202ENST00000623529 PXDNQ92626 1479 aa13.42□□□□□ -0.26
LINC01561-202ENST00000623529 HSP90AB2PQ58FF8 381 aa13.42□□□□□ -0.26
LINC01561-202ENST00000623529 CABLES1Q8TDN4 633 aa13.42□□□□□ -0.26
LINC01561-202ENST00000623529 SPATA31A3Q5VYP0 1347 aa13.41□□□□□ -0.26
LINC01561-202ENST00000623529 GCP02774 474 aa13.41□□□□□ -0.26
LINC01561-202ENST00000623529 NEFLP07196 543 aa13.41□□□□□ -0.26
LINC01561-202ENST00000623529 TULP1O00294 542 aaPredicted RBP13.41□□□□□ -0.26
LINC01561-202ENST00000623529 WDR43Q15061 677 aaKnown RBP eCLIP13.41□□□□□ -0.26
LINC01561-202ENST00000623529 CFAP53Q96M91 514 aa13.41□□□□□ -0.26
LINC01561-202ENST00000623529 SBNO1A3KN83 1393 aa13.4□□□□□ -0.26
LINC01561-202ENST00000623529 INSRP06213 1382 aa13.4□□□□□ -0.26
LINC01561-202ENST00000623529 COL3A1P02461 1466 aaPredicted RBP13.4□□□□□ -0.26
LINC01561-202ENST00000623529 DIAPH1O60610 1272 aaKnown RBP13.39□□□□□ -0.27
LINC01561-202ENST00000623529 IL13P35225 146 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms