RNA–Protein interactions for RNA: ENST00000622768.4

GRIA3-209, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene GRIA3, Length 5,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-209ENST00000622768 CCDC125Q86Z20 511 aa11.81□□□□□ -0.52
GRIA3-209ENST00000622768 TCP11L2Q8N4U5 519 aa11.81□□□□□ -0.52
GRIA3-209ENST00000622768 BTG4Q9NY30 223 aa11.81□□□□□ -0.52
GRIA3-209ENST00000622768 ZPR1O75312 459 aa11.81□□□□□ -0.52
GRIA3-209ENST00000622768 CEP170BQ9Y4F5 1589 aaPredicted RBP11.81□□□□□ -0.52
GRIA3-209ENST00000622768 ZC3H13Q5T200 1668 aaKnown RBP11.8□□□□□ -0.52
GRIA3-209ENST00000622768 GGNBP2Q9H3C7 697 aa11.8□□□□□ -0.52
GRIA3-209ENST00000622768 OS9Q13438 667 aaPredicted RBP11.8□□□□□ -0.52
GRIA3-209ENST00000622768 ZNF530Q6P9A1 599 aaPredicted RBP11.79□□□□□ -0.52
GRIA3-209ENST00000622768 IL2RBP14784 551 aa11.79□□□□□ -0.52
GRIA3-209ENST00000622768 NGEFQ8N5V2 710 aa11.79□□□□□ -0.52
GRIA3-209ENST00000622768 SETD1BQ9UPS6 1966 aaKnown RBP11.79□□□□□ -0.52
GRIA3-209ENST00000622768 EIF5BO60841 1220 aaKnown RBP11.79□□□□□ -0.52
GRIA3-209ENST00000622768 TTC21BQ7Z4L5 1316 aa11.79□□□□□ -0.52
GRIA3-209ENST00000622768 MTHFSP49914 203 aa11.78□□□□□ -0.52
GRIA3-209ENST00000622768 UNC5CLQ8IV45 518 aa11.78□□□□□ -0.52
GRIA3-209ENST00000622768 IPO8O15397 1037 aaKnown RBP11.78□□□□□ -0.52
GRIA3-209ENST00000622768 DAXXQ9UER7 740 aaPredicted RBP11.78□□□□□ -0.52
GRIA3-209ENST00000622768 KRT27Q7Z3Y8 459 aa11.78□□□□□ -0.52
GRIA3-209ENST00000622768 AFF2P51816 1311 aa11.78□□□□□ -0.52
GRIA3-209ENST00000622768 WWC1Q8IX03 1113 aa11.77□□□□□ -0.52
GRIA3-209ENST00000622768 REREQ9P2R6 1566 aa11.77□□□□□ -0.52
GRIA3-209ENST00000622768 APBA3O96018 575 aa11.77□□□□□ -0.53
GRIA3-209ENST00000622768 FTSJ3Q8IY81 847 aaKnown RBP11.77□□□□□ -0.53
GRIA3-209ENST00000622768 CLTCQ00610 1675 aaKnown RBP11.77□□□□□ -0.53
GRIA3-209ENST00000622768 ADGRB3O60242 1522 aa11.77□□□□□ -0.53
GRIA3-209ENST00000622768 NKTRP30414 1462 aaKnown RBP11.76□□□□□ -0.53
GRIA3-209ENST00000622768 PPIP5K1Q6PFW1 1433 aa11.76□□□□□ -0.53
GRIA3-209ENST00000622768 NSD2O96028 1365 aa11.76□□□□□ -0.53
GRIA3-209ENST00000622768 ANKRD24Q8TF21 1146 aa11.76□□□□□ -0.53
GRIA3-209ENST00000622768 THRAP3Q9Y2W1 955 aaKnown RBP11.76□□□□□ -0.53
GRIA3-209ENST00000622768 ZCRB1Q8TBF4 217 aaKnown RBP11.76□□□□□ -0.53
GRIA3-209ENST00000622768 IFNL2Q8IZJ0 200 aa11.75□□□□□ -0.53
GRIA3-209ENST00000622768 COL17A1Q9UMD9 1497 aaPredicted RBP11.75□□□□□ -0.53
GRIA3-209ENST00000622768 ILDR1Q86SU0 546 aaPredicted RBP11.75□□□□□ -0.53
GRIA3-209ENST00000622768 BCL11AQ9H165 835 aa11.75□□□□□ -0.53
GRIA3-209ENST00000622768 CDC42BPAQ5VT25 1732 aa11.75□□□□□ -0.53
GRIA3-209ENST00000622768 WDHD1O75717 1129 aaPredicted RBP11.74□□□□□ -0.53
GRIA3-209ENST00000622768 SALL2Q9Y467 1007 aaPredicted RBP11.74□□□□□ -0.53
GRIA3-209ENST00000622768 KCNJ4P48050 445 aa11.74□□□□□ -0.53
GRIA3-209ENST00000622768 CHRNA2Q15822 529 aa11.74□□□□□ -0.53
GRIA3-209ENST00000622768 CCDC7Q96M83 1385 aa11.74□□□□□ -0.53
GRIA3-209ENST00000622768 ORAI2Q96SN7 254 aa11.74□□□□□ -0.53
GRIA3-209ENST00000622768 FRAT2O75474 233 aaPredicted RBP11.73□□□□□ -0.53
GRIA3-209ENST00000622768 ADGRL3Q9HAR2 1447 aa11.73□□□□□ -0.53
GRIA3-209ENST00000622768 TET3O43151 1660 aa11.73□□□□□ -0.53
GRIA3-209ENST00000622768 FAM98CQ17RN3 349 aaKnown RBP11.73□□□□□ -0.53
GRIA3-209ENST00000622768 NBPF1Q3BBV0 1214 aa11.73□□□□□ -0.53
GRIA3-209ENST00000622768 TFCP2L1Q9NZI6 479 aa11.73□□□□□ -0.53
GRIA3-209ENST00000622768 NOL10Q9BSC4 688 aaKnown RBP11.73□□□□□ -0.53
GRIA3-209ENST00000622768 BRINP3Q76B58 766 aa11.73□□□□□ -0.53
GRIA3-209ENST00000622768 FAM135BQ49AJ0 1406 aa11.72□□□□□ -0.53
GRIA3-209ENST00000622768 ANKARQ7Z5J8 1434 aa11.72□□□□□ -0.53
GRIA3-209ENST00000622768 GCP02774 474 aa11.72□□□□□ -0.53
GRIA3-209ENST00000622768 LMTK2Q8IWU2 1503 aa11.72□□□□□ -0.53
GRIA3-209ENST00000622768 RFC4P35249 363 aa11.72□□□□□ -0.53
GRIA3-209ENST00000622768 SLC12A5Q9H2X9 1139 aa11.72□□□□□ -0.53
GRIA3-209ENST00000622768 INO80Q9ULG1 1556 aaPredicted RBP11.72□□□□□ -0.53
GRIA3-209ENST00000622768 ABCA6Q8N139 1617 aa11.71□□□□□ -0.53
GRIA3-209ENST00000622768 CHMP3Q9Y3E7 222 aa11.71□□□□□ -0.53
GRIA3-209ENST00000622768 BCORL1Q5H9F3 1711 aa11.71□□□□□ -0.53
GRIA3-209ENST00000622768 GORABQ5T7V8 394 aa11.71□□□□□ -0.54
GRIA3-209ENST00000622768 PARP3Q9Y6F1 533 aa11.7□□□□□ -0.54
GRIA3-209ENST00000622768 PCDH11XQ9BZA7 1347 aa11.7□□□□□ -0.54
GRIA3-209ENST00000622768 PCDH11YQ9BZA8 1340 aa11.7□□□□□ -0.54
GRIA3-209ENST00000622768 ZFYVE9O95405 1425 aa11.7□□□□□ -0.54
GRIA3-209ENST00000622768 SYNMO15061 1565 aa11.7□□□□□ -0.54
GRIA3-209ENST00000622768 HNRNPUQ00839 825 aaKnown RBP eCLIP11.69□□□□□ -0.54
GRIA3-209ENST00000622768 HSP90AB3PQ58FF7 597 aa11.69□□□□□ -0.54
GRIA3-209ENST00000622768 DCCP43146 1447 aa11.69□□□□□ -0.54
GRIA3-209ENST00000622768 DIP2AQ14689 1571 aa11.69□□□□□ -0.54
GRIA3-209ENST00000622768 ST5P78524 1137 aa11.69□□□□□ -0.54
GRIA3-209ENST00000622768 LRRIQ1Q96JM4 1722 aa11.69□□□□□ -0.54
GRIA3-209ENST00000622768 TSPYL4Q9UJ04 414 aa11.68□□□□□ -0.54
GRIA3-209ENST00000622768 GNAI1P63096 354 aa11.68□□□□□ -0.54
GRIA3-209ENST00000622768 CABLES1Q8TDN4 633 aa11.68□□□□□ -0.54
GRIA3-209ENST00000622768 MYBBP1AQ9BQG0 1328 aaKnown RBP11.68□□□□□ -0.54
GRIA3-209ENST00000622768 PREX1Q8TCU6 1659 aa11.68□□□□□ -0.54
GRIA3-209ENST00000622768 PLEKHG3A1L390 1219 aa11.68□□□□□ -0.54
GRIA3-209ENST00000622768 MPRIPQ6WCQ1 1025 aa11.68□□□□□ -0.54
GRIA3-209ENST00000622768 SEPT12Q8IYM1 358 aa11.67□□□□□ -0.54
GRIA3-209ENST00000622768 TRIM34Q9BYJ4 488 aa11.67□□□□□ -0.54
GRIA3-209ENST00000622768 SBNO1A3KN83 1393 aa11.67□□□□□ -0.54
GRIA3-209ENST00000622768 PRDM15P57071 1507 aaPredicted RBP11.67□□□□□ -0.54
GRIA3-209ENST00000622768 CDC42BPBQ9Y5S2 1711 aa11.67□□□□□ -0.54
GRIA3-209ENST00000622768 NSD3Q9BZ95 1437 aa11.66□□□□□ -0.54
GRIA3-209ENST00000622768 RTCBQ9Y3I0 505 aaKnown RBP11.66□□□□□ -0.54
GRIA3-209ENST00000622768 IQSEC2Q5JU85 1478 aa11.66□□□□□ -0.54
GRIA3-209ENST00000622768 GPR162Q16538 588 aa11.66□□□□□ -0.54
GRIA3-209ENST00000622768 SULT6B1Q6IMI4 303 aa11.65□□□□□ -0.54
GRIA3-209ENST00000622768 VPS37DQ86XT2 251 aa11.65□□□□□ -0.54
GRIA3-209ENST00000622768 NME9Q86XW9 330 aa11.65□□□□□ -0.54
GRIA3-209ENST00000622768 SMC4Q9NTJ3 1288 aa11.65□□□□□ -0.54
GRIA3-209ENST00000622768 ANKRD36BQ8N2N9 1353 aa11.65□□□□□ -0.54
GRIA3-209ENST00000622768 CCDC87Q9NVE4 849 aa11.65□□□□□ -0.54
GRIA3-209ENST00000622768 AMOTL1Q8IY63 956 aa11.65□□□□□ -0.55
GRIA3-209ENST00000622768 GJD4Q96KN9 370 aaPredicted RBP11.65□□□□□ -0.55
GRIA3-209ENST00000622768 KIF13AQ9H1H9 1805 aa11.65□□□□□ -0.55
GRIA3-209ENST00000622768 EIF2S2P20042 333 aaKnown RBP11.64□□□□□ -0.55
GRIA3-209ENST00000622768 RIC3Q7Z5B4 369 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms