RNA–Protein interactions for RNA: ENST00000622433.4

MECP2-213, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-213ENST00000622433 NRKQ7Z2Y5 1582 aa18.81■□□□□ 0.6
MECP2-213ENST00000622433 HDGFL2Q7Z4V5 671 aaPredicted RBP18.8■□□□□ 0.6
MECP2-213ENST00000622433 TERF2IPQ9NYB0 399 aa18.8■□□□□ 0.6
MECP2-213ENST00000622433 LRP6O75581 1613 aa18.8■□□□□ 0.6
MECP2-213ENST00000622433 KTN1Q86UP2 1357 aaKnown RBP18.8■□□□□ 0.6
MECP2-213ENST00000622433 MYOM1P52179 1685 aa18.79■□□□□ 0.6
MECP2-213ENST00000622433 A0A1W2PP64 1363 aa18.79■□□□□ 0.6
MECP2-213ENST00000622433 ANKRD36BQ8N2N9 1353 aa18.79■□□□□ 0.6
MECP2-213ENST00000622433 PAK3O75914 559 aaPredicted RBP18.78■□□□□ 0.6
MECP2-213ENST00000622433 LMOD2Q6P5Q4 547 aa18.77■□□□□ 0.6
MECP2-213ENST00000622433 TTC21BQ7Z4L5 1316 aa18.76■□□□□ 0.59
MECP2-213ENST00000622433 TTC21AQ8NDW8 1320 aa18.76■□□□□ 0.59
MECP2-213ENST00000622433 EDC4Q6P2E9 1401 aaKnown RBP18.76■□□□□ 0.59
MECP2-213ENST00000622433 ABCA3Q99758 1704 aa18.75■□□□□ 0.59
MECP2-213ENST00000622433 NUTM2BA6NNL0 878 aaPredicted RBP18.75■□□□□ 0.59
MECP2-213ENST00000622433 NUTM2EB1AL46 878 aaPredicted RBP18.75■□□□□ 0.59
MECP2-213ENST00000622433 C11orf95C9JLR9 678 aaPredicted RBP18.75■□□□□ 0.59
MECP2-213ENST00000622433 NUTM2AQ8IVF1 878 aaPredicted RBP18.75■□□□□ 0.59
MECP2-213ENST00000622433 CRYBG1Q9Y4K1 1723 aa18.74■□□□□ 0.59
MECP2-213ENST00000622433 ABTB2Q8N961 1025 aa18.74■□□□□ 0.59
MECP2-213ENST00000622433 PIK3C2AO00443 1686 aa18.73■□□□□ 0.59
MECP2-213ENST00000622433 USP19O94966 1318 aa18.73■□□□□ 0.59
MECP2-213ENST00000622433 KIF7Q2M1P5 1343 aa18.73■□□□□ 0.59
MECP2-213ENST00000622433 NLRP13Q86W25 1043 aa18.71■□□□□ 0.59
MECP2-213ENST00000622433 POLR3GLQ9BT43 218 aa18.71■□□□□ 0.59
MECP2-213ENST00000622433 PHRF1Q9P1Y6 1649 aaKnown RBP18.71■□□□□ 0.58
MECP2-213ENST00000622433 USP31Q70CQ4 1352 aa18.7■□□□□ 0.58
MECP2-213ENST00000622433 USP54Q70EL1 1684 aa18.7■□□□□ 0.58
MECP2-213ENST00000622433 MEX3CQ5U5Q3 659 aaKnown RBP18.7■□□□□ 0.58
MECP2-213ENST00000622433 CABLES1Q8TDN4 633 aa18.7■□□□□ 0.58
MECP2-213ENST00000622433 MARF1Q9Y4F3 1742 aaKnown RBP18.7■□□□□ 0.58
MECP2-213ENST00000622433 SLIT3O75094 1523 aa18.69■□□□□ 0.58
MECP2-213ENST00000622433 CCDC7Q96M83 1385 aa18.69■□□□□ 0.58
MECP2-213ENST00000622433 NUTM2GQ5VZR2 741 aa18.69■□□□□ 0.58
MECP2-213ENST00000622433 HAP1P54257 671 aaPredicted RBP18.68■□□□□ 0.58
MECP2-213ENST00000622433 NLRP6P59044 892 aa18.68■□□□□ 0.58
MECP2-213ENST00000622433 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.68■□□□□ 0.585e-7■■■■□ 20.4
MECP2-213ENST00000622433 ADAMTS2O95450 1211 aa18.67■□□□□ 0.58
MECP2-213ENST00000622433 CARD14Q9BXL6 1004 aa18.66■□□□□ 0.58
MECP2-213ENST00000622433 WASHC2AQ641Q2 1341 aa18.66■□□□□ 0.58
MECP2-213ENST00000622433 NME9Q86XW9 330 aa18.65■□□□□ 0.58
MECP2-213ENST00000622433 PHF23Q9BUL5 403 aaPredicted RBP18.65■□□□□ 0.58
MECP2-213ENST00000622433 OVOS2A0A0J9YW53 1432 aa18.65■□□□□ 0.58
MECP2-213ENST00000622433 OVOS2Q6IE36 1432 aa18.65■□□□□ 0.58
MECP2-213ENST00000622433 NSD3Q9BZ95 1437 aa18.65■□□□□ 0.58
MECP2-213ENST00000622433 PLEKHG5O94827 1062 aa18.64■□□□□ 0.57
MECP2-213ENST00000622433 C8orf37Q96NL8 207 aa18.64■□□□□ 0.57
MECP2-213ENST00000622433 GCP02774 474 aa18.63■□□□□ 0.57
MECP2-213ENST00000622433 PANK3Q9H999 370 aa18.63■□□□□ 0.57
MECP2-213ENST00000622433 CPDO75976 1380 aa18.63■□□□□ 0.57
MECP2-213ENST00000622433 FNBP4Q8N3X1 1017 aaPredicted RBP18.62■□□□□ 0.57
MECP2-213ENST00000622433 KCNH5Q8NCM2 988 aa18.62■□□□□ 0.57
MECP2-213ENST00000622433 NGLY1Q96IV0 654 aa18.62■□□□□ 0.57
MECP2-213ENST00000622433 AFF2P51816 1311 aa18.62■□□□□ 0.57
MECP2-213ENST00000622433 SLIT2O94813 1529 aa18.62■□□□□ 0.57
MECP2-213ENST00000622433 KIF20BQ96Q89 1820 aa18.61■□□□□ 0.57
MECP2-213ENST00000622433 COL14A1Q05707 1796 aaKnown RBP18.61■□□□□ 0.57
MECP2-213ENST00000622433 RGS17Q9UGC6 210 aaPredicted RBP18.61■□□□□ 0.57
MECP2-213ENST00000622433 ZRANB1Q9UGI0 708 aa18.61■□□□□ 0.57
MECP2-213ENST00000622433 NFAT5O94916 1531 aa18.6■□□□□ 0.57
MECP2-213ENST00000622433 KIAA0232Q92628 1395 aa18.6■□□□□ 0.57
MECP2-213ENST00000622433 FYB1O15117 783 aa18.6■□□□□ 0.57
MECP2-213ENST00000622433 ZNF772Q68DY9 489 aaPredicted RBP18.6■□□□□ 0.57
MECP2-213ENST00000622433 CGNL1Q0VF96 1302 aa18.59■□□□□ 0.57
MECP2-213ENST00000622433 FAM83GA6ND36 823 aa18.59■□□□□ 0.57
MECP2-213ENST00000622433 COG3Q96JB2 828 aa18.59■□□□□ 0.57
MECP2-213ENST00000622433 PRDM11Q9NQV5 511 aa18.59■□□□□ 0.57
MECP2-213ENST00000622433 NWD2Q9ULI1 1742 aa18.59■□□□□ 0.57
MECP2-213ENST00000622433 PLCH1Q4KWH8 1693 aa18.59■□□□□ 0.57
MECP2-213ENST00000622433 ZC3H6P61129 1189 aaKnown RBP18.58■□□□□ 0.56
MECP2-213ENST00000622433 BCL9LQ86UU0 1499 aa18.58■□□□□ 0.56
MECP2-213ENST00000622433 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.57■□□□□ 0.56
MECP2-213ENST00000622433 NSD2O96028 1365 aa18.56■□□□□ 0.56
MECP2-213ENST00000622433 GGNBP2Q9H3C7 697 aa18.56■□□□□ 0.56
MECP2-213ENST00000622433 USP21Q9UK80 565 aa18.56■□□□□ 0.56
MECP2-213ENST00000622433 LMO7Q8WWI1 1683 aa18.56■□□□□ 0.56
MECP2-213ENST00000622433 ABCC6O95255 1503 aa18.55■□□□□ 0.56
MECP2-213ENST00000622433 ARHGEF25Q86VW2 580 aa18.55■□□□□ 0.56
MECP2-213ENST00000622433 UNC5CLQ8IV45 518 aa18.55■□□□□ 0.56
MECP2-213ENST00000622433 AATKQ6ZMQ8 1374 aa18.55■□□□□ 0.56
MECP2-213ENST00000622433 NRAPQ86VF7 1730 aa18.54■□□□□ 0.56
MECP2-213ENST00000622433 KNSTRNQ9Y448 316 aa18.54■□□□□ 0.56
MECP2-213ENST00000622433 ATRNO75882 1429 aa18.54■□□□□ 0.56
MECP2-213ENST00000622433 ANKRD26Q9UPS8 1709 aa18.54■□□□□ 0.56
MECP2-213ENST00000622433 PER1O15534 1290 aaPredicted RBP18.53■□□□□ 0.56
MECP2-213ENST00000622433 CHRNA2Q15822 529 aa18.53■□□□□ 0.56
MECP2-213ENST00000622433 COL18A1P39060 1754 aa18.53■□□□□ 0.56
MECP2-213ENST00000622433 SOX12O15370 315 aa18.52■□□□□ 0.56
MECP2-213ENST00000622433 POTEAQ6S8J7 498 aa18.52■□□□□ 0.56
MECP2-213ENST00000622433 BTG4Q9NY30 223 aa18.52■□□□□ 0.56
MECP2-213ENST00000622433 TRPC5Q9UL62 973 aaPredicted RBP18.51■□□□□ 0.55
MECP2-213ENST00000622433 CAMTA1Q9Y6Y1 1673 aa18.5■□□□□ 0.55
MECP2-213ENST00000622433 AMER1Q5JTC6 1135 aaPredicted RBP18.5■□□□□ 0.55
MECP2-213ENST00000622433 QTRT2Q9H974 415 aaKnown RBP18.5■□□□□ 0.55
MECP2-213ENST00000622433 NPC1L1Q9UHC9 1359 aa18.5■□□□□ 0.55
MECP2-213ENST00000622433 VPS72Q15906 364 aa18.49■□□□□ 0.55
MECP2-213ENST00000622433 LTN1O94822 1766 aa18.49■□□□□ 0.55
MECP2-213ENST00000622433 COL5A2P05997 1499 aaPredicted RBP18.48■□□□□ 0.55
MECP2-213ENST00000622433 ZBTB7CA1YPR0 619 aa18.48■□□□□ 0.55
MECP2-213ENST00000622433 RTL1A6NKG5 1358 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms