RNA–Protein interactions for RNA: ENST00000622143.1

SRSF4-207, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-207ENST00000622143 ZMYND10O75800 440 aa8.24□□□□□ -1.09
SRSF4-207ENST00000622143 IFFO2Q5TF58 517 aa8.24□□□□□ -1.09
SRSF4-207ENST00000622143 NYAP1Q6ZVC0 841 aa8.24□□□□□ -1.09
SRSF4-207ENST00000622143 HPS5Q9UPZ3 1129 aa8.24□□□□□ -1.09
SRSF4-207ENST00000622143 KIF14Q15058 1648 aa8.24□□□□□ -1.09
SRSF4-207ENST00000622143 MYO5CQ9NQX4 1742 aa8.23□□□□□ -1.09
SRSF4-207ENST00000622143 ARHGAP5Q13017 1502 aa8.23□□□□□ -1.09
SRSF4-207ENST00000622143 SUPT6HQ7KZ85 1726 aaKnown RBP8.23□□□□□ -1.09
SRSF4-207ENST00000622143 ZNF518AQ6AHZ1 1483 aa8.22□□□□□ -1.09
SRSF4-207ENST00000622143 ITGBL1O95965 494 aaPredicted RBP8.22□□□□□ -1.09
SRSF4-207ENST00000622143 EFCAB2Q5VUJ9 269 aa8.22□□□□□ -1.09
SRSF4-207ENST00000622143 SETD1BQ9UPS6 1966 aaKnown RBP8.21□□□□□ -1.09
SRSF4-207ENST00000622143 HIC1Q14526 733 aa8.21□□□□□ -1.1
SRSF4-207ENST00000622143 FAM161AQ3B820 660 aa8.21□□□□□ -1.1
SRSF4-207ENST00000622143 BARGINQ6ZT62 677 aa8.21□□□□□ -1.1
SRSF4-207ENST00000622143 SLC24A3Q9HC58 644 aa8.21□□□□□ -1.1
SRSF4-207ENST00000622143 KDM5CP41229 1560 aa8.21□□□□□ -1.1
SRSF4-207ENST00000622143 MYO3AQ8NEV4 1616 aa8.21□□□□□ -1.1
SRSF4-207ENST00000622143 A0A0G2JS52 829 aa8.2□□□□□ -1.1
SRSF4-207ENST00000622143 FECHP22830 423 aa8.2□□□□□ -1.1
SRSF4-207ENST00000622143 SWT1Q5T5J6 900 aaKnown RBP8.2□□□□□ -1.1
SRSF4-207ENST00000622143 GNPATO15228 680 aa8.19□□□□□ -1.1
SRSF4-207ENST00000622143 CLTCQ00610 1675 aaKnown RBP8.18□□□□□ -1.1
SRSF4-207ENST00000622143 TOM1O60784 492 aa8.18□□□□□ -1.1
SRSF4-207ENST00000622143 PPP4CP60510 307 aa8.18□□□□□ -1.1
SRSF4-207ENST00000622143 KRI1Q8N9T8 703 aaKnown RBP8.18□□□□□ -1.1
SRSF4-207ENST00000622143 REREQ9P2R6 1566 aa8.18□□□□□ -1.1
SRSF4-207ENST00000622143 CEP170BQ9Y4F5 1589 aaPredicted RBP8.18□□□□□ -1.1
SRSF4-207ENST00000622143 RBM46Q8TBY0 533 aaKnown RBP8.17□□□□□ -1.1
SRSF4-207ENST00000622143 PXYLP1Q8TE99 480 aa8.17□□□□□ -1.1
SRSF4-207ENST00000622143 TMEM134Q9H6X4 195 aa8.17□□□□□ -1.1
SRSF4-207ENST00000622143 RGS17Q9UGC6 210 aaPredicted RBP8.17□□□□□ -1.1
SRSF4-207ENST00000622143 ZMYM3Q14202 1370 aa8.17□□□□□ -1.1
SRSF4-207ENST00000622143 AGLP35573 1532 aa8.17□□□□□ -1.1
SRSF4-207ENST00000622143 RCCD1A6NED2 376 aa8.16□□□□□ -1.1
SRSF4-207ENST00000622143 SETD1AO15047 1707 aaKnown RBP8.16□□□□□ -1.1
SRSF4-207ENST00000622143 DNAJB2P25686 324 aa8.16□□□□□ -1.1
SRSF4-207ENST00000622143 ZNF142P52746 1687 aaPredicted RBP8.16□□□□□ -1.1
SRSF4-207ENST00000622143 MAP2K5Q13163 448 aa8.16□□□□□ -1.1
SRSF4-207ENST00000622143 TCOF1Q13428 1488 aaKnown RBP8.16□□□□□ -1.1
SRSF4-207ENST00000622143 CNTLNQ9NXG0 1405 aa8.16□□□□□ -1.1
SRSF4-207ENST00000622143 ITSN2Q9NZM3 1697 aa8.16□□□□□ -1.1
SRSF4-207ENST00000622143 ALKQ9UM73 1620 aa8.16□□□□□ -1.1
SRSF4-207ENST00000622143 KIDINS220Q9ULH0 1771 aa8.15□□□□□ -1.1
SRSF4-207ENST00000622143 PLA2R1Q13018 1463 aa8.15□□□□□ -1.1
SRSF4-207ENST00000622143 NPATQ14207 1427 aa8.15□□□□□ -1.1
SRSF4-207ENST00000622143 RNF40O75150 1001 aa8.15□□□□□ -1.1
SRSF4-207ENST00000622143 APLP1P51693 650 aa8.15□□□□□ -1.1
SRSF4-207ENST00000622143 HDGFP51858 240 aaKnown RBP8.15□□□□□ -1.1
SRSF4-207ENST00000622143 METTL3Q86U44 580 aaKnown RBP8.15□□□□□ -1.1
SRSF4-207ENST00000622143 CDC42BPBQ9Y5S2 1711 aa8.15□□□□□ -1.11
SRSF4-207ENST00000622143 MROH2AA6NES4 1674 aa8.14□□□□□ -1.11
SRSF4-207ENST00000622143 ABCC1P33527 1531 aa8.14□□□□□ -1.11
SRSF4-207ENST00000622143 MLH3Q9UHC1 1453 aa8.14□□□□□ -1.11
SRSF4-207ENST00000622143 TJAP1Q5JTD0 557 aa8.14□□□□□ -1.11
SRSF4-207ENST00000622143 SLF2Q8IX21 1173 aa8.14□□□□□ -1.11
SRSF4-207ENST00000622143 CCDC102AQ96A19 550 aa8.14□□□□□ -1.11
SRSF4-207ENST00000622143 ZNF777Q9ULD5 760 aaPredicted RBP8.14□□□□□ -1.11
SRSF4-207ENST00000622143 SHANK2Q9UPX8 1470 aa8.13□□□□□ -1.11
SRSF4-207ENST00000622143 PTPRKQ15262 1439 aa8.13□□□□□ -1.11
SRSF4-207ENST00000622143 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.13□□□□□ -1.11
SRSF4-207ENST00000622143 OATP04181 439 aa8.13□□□□□ -1.11
SRSF4-207ENST00000622143 GGT6Q6P531 493 aa8.13□□□□□ -1.11
SRSF4-207ENST00000622143 AK7Q96M32 723 aa8.13□□□□□ -1.11
SRSF4-207ENST00000622143 NEURL4Q96JN8 1562 aa8.13□□□□□ -1.11
SRSF4-207ENST00000622143 CPS1P31327 1500 aa8.13□□□□□ -1.11
SRSF4-207ENST00000622143 POLR1AO95602 1720 aaPredicted RBP8.12□□□□□ -1.11
SRSF4-207ENST00000622143 MINK1Q8N4C8 1332 aaPredicted RBP8.12□□□□□ -1.11
SRSF4-207ENST00000622143 DNMT1P26358 1616 aaKnown RBP8.12□□□□□ -1.11
SRSF4-207ENST00000622143 POTEAQ6S8J7 498 aa8.12□□□□□ -1.11
SRSF4-207ENST00000622143 ZNF775Q96BV0 537 aaPredicted RBP8.12□□□□□ -1.11
SRSF4-207ENST00000622143 TROQ12816 1431 aaPredicted RBP8.12□□□□□ -1.11
SRSF4-207ENST00000622143 IRF6O14896 467 aa8.11□□□□□ -1.11
SRSF4-207ENST00000622143 SLC4A3P48751 1232 aa8.11□□□□□ -1.11
SRSF4-207ENST00000622143 KCNC4Q03721 635 aa8.11□□□□□ -1.11
SRSF4-207ENST00000622143 PHOX2BQ99453 314 aa8.11□□□□□ -1.11
SRSF4-207ENST00000622143 LRRIQ1Q96JM4 1722 aa8.11□□□□□ -1.11
SRSF4-207ENST00000622143 PREX2Q70Z35 1606 aa8.11□□□□□ -1.11
SRSF4-207ENST00000622143 SAMD9LQ8IVG5 1584 aa8.1□□□□□ -1.11
SRSF4-207ENST00000622143 VWDEQ8N2E2 1590 aa8.1□□□□□ -1.11
SRSF4-207ENST00000622143 TRAF7Q6Q0C0 670 aa8.1□□□□□ -1.11
SRSF4-207ENST00000622143 NECTIN2Q92692 538 aa8.1□□□□□ -1.11
SRSF4-207ENST00000622143 MTRQ99707 1265 aa8.1□□□□□ -1.11
SRSF4-207ENST00000622143 A2ML1A8K2U0 1454 aa8.1□□□□□ -1.11
SRSF4-207ENST00000622143 CLIP1P30622 1438 aa8.1□□□□□ -1.11
SRSF4-207ENST00000622143 SYCP2Q9BX26 1530 aa8.09□□□□□ -1.11
SRSF4-207ENST00000622143 TRIM66O15016 1216 aa8.09□□□□□ -1.11
SRSF4-207ENST00000622143 SLC10A3P09131 477 aa8.09□□□□□ -1.11
SRSF4-207ENST00000622143 FBXO31Q5XUX0 539 aaPredicted RBP8.09□□□□□ -1.11
SRSF4-207ENST00000622143 CDK11AQ9UQ88 783 aaPredicted RBP8.09□□□□□ -1.11
SRSF4-207ENST00000622143 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.09□□□□□ -1.12
SRSF4-207ENST00000622143 SPAG9O60271 1321 aaKnown RBP8.08□□□□□ -1.12
SRSF4-207ENST00000622143 STRCP1A6NGW2 1772 aa8.08□□□□□ -1.12
SRSF4-207ENST00000622143 HNRNPMP52272 730 aaKnown RBP eCLIP8.08□□□□□ -1.12
SRSF4-207ENST00000622143 CDC42BPAQ5VT25 1732 aa8.07□□□□□ -1.12
SRSF4-207ENST00000622143 BRPF1P55201 1214 aaPredicted RBP8.07□□□□□ -1.12
SRSF4-207ENST00000622143 NEUROD2Q15784 382 aa8.07□□□□□ -1.12
SRSF4-207ENST00000622143 IL21Q9HBE4 155 aa8.07□□□□□ -1.12
SRSF4-207ENST00000622143 ATP7AQ04656 1500 aa8.07□□□□□ -1.12
SRSF4-207ENST00000622143 RNF17Q9BXT8 1623 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms