RNA–Protein interactions for RNA: ENST00000622120.1

LINC00963-213, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 355 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-213ENST00000622120 SLIT2O94813 1529 aa17.8■□□□□ 0.44
LINC00963-213ENST00000622120 POLR3AO14802 1390 aaPredicted RBP17.79■□□□□ 0.44
LINC00963-213ENST00000622120 CABP2Q9NPB3 220 aa17.79■□□□□ 0.44
LINC00963-213ENST00000622120 PLCH1Q4KWH8 1693 aa17.79■□□□□ 0.44
LINC00963-213ENST00000622120 NWD2Q9ULI1 1742 aa17.78■□□□□ 0.44
LINC00963-213ENST00000622120 EVC2Q86UK5 1308 aa17.78■□□□□ 0.44
LINC00963-213ENST00000622120 GJD4Q96KN9 370 aaPredicted RBP17.78■□□□□ 0.44
LINC00963-213ENST00000622120 PPIP5K1Q6PFW1 1433 aa17.78■□□□□ 0.44
LINC00963-213ENST00000622120 UPF1Q92900 1129 aaKnown RBP eCLIP17.77■□□□□ 0.441e-6■■■□□ 15.7
LINC00963-213ENST00000622120 CRYBG1Q9Y4K1 1723 aa17.75■□□□□ 0.43
LINC00963-213ENST00000622120 FAM83GA6ND36 823 aa17.75■□□□□ 0.43
LINC00963-213ENST00000622120 CARD11Q9BXL7 1154 aa17.75■□□□□ 0.43
LINC00963-213ENST00000622120 COL14A1Q05707 1796 aaKnown RBP17.74■□□□□ 0.43
LINC00963-213ENST00000622120 RALGAPBQ86X10 1494 aa17.74■□□□□ 0.43
LINC00963-213ENST00000622120 VPS72Q15906 364 aa17.73■□□□□ 0.43
LINC00963-213ENST00000622120 NUTM2GQ5VZR2 741 aa17.73■□□□□ 0.43
LINC00963-213ENST00000622120 CABP1Q9NZU7 370 aa17.73■□□□□ 0.43
LINC00963-213ENST00000622120 CCDC9Q9Y3X0 531 aaKnown RBP17.73■□□□□ 0.43
LINC00963-213ENST00000622120 GLI3P10071 1580 aa17.72■□□□□ 0.43
LINC00963-213ENST00000622120 ATAD2Q6PL18 1390 aa17.72■□□□□ 0.43
LINC00963-213ENST00000622120 ABTB2Q8N961 1025 aa17.72■□□□□ 0.43
LINC00963-213ENST00000622120 PHRF1Q9P1Y6 1649 aaKnown RBP17.72■□□□□ 0.43
LINC00963-213ENST00000622120 BRD4O60885 1362 aaPredicted RBP17.71■□□□□ 0.43
LINC00963-213ENST00000622120 PRDM11Q9NQV5 511 aa17.71■□□□□ 0.43
LINC00963-213ENST00000622120 BTG4Q9NY30 223 aa17.71■□□□□ 0.43
LINC00963-213ENST00000622120 NRAPQ86VF7 1730 aa17.69■□□□□ 0.42
LINC00963-213ENST00000622120 SBNO2Q9Y2G9 1366 aa17.68■□□□□ 0.42
LINC00963-213ENST00000622120 NLRP13Q86W25 1043 aa17.68■□□□□ 0.42
LINC00963-213ENST00000622120 KIAA0232Q92628 1395 aa17.67■□□□□ 0.42
LINC00963-213ENST00000622120 USP6P35125 1406 aa17.67■□□□□ 0.42
LINC00963-213ENST00000622120 ZC3H6P61129 1189 aaKnown RBP17.67■□□□□ 0.42
LINC00963-213ENST00000622120 BRWD3Q6RI45 1802 aa17.65■□□□□ 0.42
LINC00963-213ENST00000622120 CHRNA2Q15822 529 aa17.65■□□□□ 0.42
LINC00963-213ENST00000622120 SEPT12Q8IYM1 358 aa17.65■□□□□ 0.42
LINC00963-213ENST00000622120 ZNF692Q9BU19 519 aaPredicted RBP17.65■□□□□ 0.42
LINC00963-213ENST00000622120 PCGF6Q9BYE7 350 aa17.65■□□□□ 0.42
LINC00963-213ENST00000622120 AKAP12Q02952 1782 aa17.65■□□□□ 0.42
LINC00963-213ENST00000622120 USP19O94966 1318 aa17.65■□□□□ 0.42
LINC00963-213ENST00000622120 NRKQ7Z2Y5 1582 aa17.65■□□□□ 0.42
LINC00963-213ENST00000622120 A0A0G2JS52 829 aa17.64■□□□□ 0.41
LINC00963-213ENST00000622120 MYT1Q01538 1121 aa17.64■□□□□ 0.41
LINC00963-213ENST00000622120 NLRP6P59044 892 aa17.63■□□□□ 0.41
LINC00963-213ENST00000622120 ONECUT3O60422 494 aaPredicted RBP17.62■□□□□ 0.41
LINC00963-213ENST00000622120 GCP02774 474 aa17.61■□□□□ 0.41
LINC00963-213ENST00000622120 FAM98CQ17RN3 349 aaKnown RBP17.61■□□□□ 0.41
LINC00963-213ENST00000622120 STRN4Q9NRL3 753 aa17.61■□□□□ 0.41
LINC00963-213ENST00000622120 SPATA31A5Q5VU36 1347 aa17.61■□□□□ 0.41
LINC00963-213ENST00000622120 SPATA31A7Q8IWB4 1347 aa17.61■□□□□ 0.41
LINC00963-213ENST00000622120 CPDO75976 1380 aa17.61■□□□□ 0.41
LINC00963-213ENST00000622120 EVA1CP58658 441 aa17.6■□□□□ 0.41
LINC00963-213ENST00000622120 TTC21BQ7Z4L5 1316 aa17.6■□□□□ 0.41
LINC00963-213ENST00000622120 CLSPNQ9HAW4 1339 aa17.6■□□□□ 0.41
LINC00963-213ENST00000622120 KTN1Q86UP2 1357 aaKnown RBP17.6■□□□□ 0.41
LINC00963-213ENST00000622120 SSH2Q76I76 1423 aa17.6■□□□□ 0.41
LINC00963-213ENST00000622120 PIK3C2AO00443 1686 aa17.6■□□□□ 0.41
LINC00963-213ENST00000622120 CPSF1Q10570 1443 aaKnown RBP17.59■□□□□ 0.41
LINC00963-213ENST00000622120 TTC21AQ8NDW8 1320 aa17.59■□□□□ 0.41
LINC00963-213ENST00000622120 KRT27Q7Z3Y8 459 aa17.59■□□□□ 0.41
LINC00963-213ENST00000622120 CCDC125Q86Z20 511 aa17.59■□□□□ 0.41
LINC00963-213ENST00000622120 TMC1Q8TDI8 760 aa17.59■□□□□ 0.41
LINC00963-213ENST00000622120 ST20-MTHFSA0A0A6YYL1 179 aa17.58■□□□□ 0.4
LINC00963-213ENST00000622120 ZBTB7CA1YPR0 619 aa17.58■□□□□ 0.4
LINC00963-213ENST00000622120 SLC24A1O60721 1099 aa17.58■□□□□ 0.4
LINC00963-213ENST00000622120 TIMELESSQ9UNS1 1208 aa17.58■□□□□ 0.4
LINC00963-213ENST00000622120 MON2Q7Z3U7 1717 aa17.58■□□□□ 0.4
LINC00963-213ENST00000622120 SLIT3O75094 1523 aa17.57■□□□□ 0.4
LINC00963-213ENST00000622120 SPATA31A1Q5TZJ5 1347 aa17.56■□□□□ 0.4
LINC00963-213ENST00000622120 LMO7Q8WWI1 1683 aa17.56■□□□□ 0.4
LINC00963-213ENST00000622120 CAMTA1Q9Y6Y1 1673 aa17.56■□□□□ 0.4
LINC00963-213ENST00000622120 HDGFL2Q7Z4V5 671 aaPredicted RBP17.56■□□□□ 0.4
LINC00963-213ENST00000622120 PUS7Q96PZ0 661 aaKnown RBP17.56■□□□□ 0.4
LINC00963-213ENST00000622120 EP400Q96L91 3159 aa17.54■□□□□ 0.4
LINC00963-213ENST00000622120 KCNH5Q8NCM2 988 aa17.54■□□□□ 0.4
LINC00963-213ENST00000622120 TESK2Q96S53 571 aa17.54■□□□□ 0.4
LINC00963-213ENST00000622120 SLC12A5Q9H2X9 1139 aa17.54■□□□□ 0.4
LINC00963-213ENST00000622120 TERF2IPQ9NYB0 399 aa17.54■□□□□ 0.4
LINC00963-213ENST00000622120 THSD7AQ9UPZ6 1657 aa17.54■□□□□ 0.4
LINC00963-213ENST00000622120 SF3B2Q13435 895 aaKnown RBP17.53■□□□□ 0.4
LINC00963-213ENST00000622120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.53■□□□□ 0.4
LINC00963-213ENST00000622120 USP35Q9P2H5 1018 aa17.53■□□□□ 0.4
LINC00963-213ENST00000622120 BLMP54132 1417 aaPredicted RBP17.53■□□□□ 0.4
LINC00963-213ENST00000622120 AATKQ6ZMQ8 1374 aa17.53■□□□□ 0.4
LINC00963-213ENST00000622120 USP47Q96K76 1375 aa17.53■□□□□ 0.4
LINC00963-213ENST00000622120 CD163L1Q9NR16 1453 aa17.52■□□□□ 0.4
LINC00963-213ENST00000622120 SOX12O15370 315 aa17.52■□□□□ 0.4
LINC00963-213ENST00000622120 LARP1Q6PKG0 1096 aaKnown RBP17.52■□□□□ 0.4
LINC00963-213ENST00000622120 NINLQ9Y2I6 1382 aa17.51■□□□□ 0.39
LINC00963-213ENST00000622120 COL5A2P05997 1499 aaPredicted RBP17.5■□□□□ 0.39
LINC00963-213ENST00000622120 EDC4Q6P2E9 1401 aaKnown RBP17.5■□□□□ 0.39
LINC00963-213ENST00000622120 TMF1P82094 1093 aa17.5■□□□□ 0.39
LINC00963-213ENST00000622120 BARGINQ6ZT62 677 aa17.5■□□□□ 0.39
LINC00963-213ENST00000622120 TCP11L2Q8N4U5 519 aa17.5■□□□□ 0.39
LINC00963-213ENST00000622120 CCER1Q8TC90 406 aaPredicted RBP17.5■□□□□ 0.39
LINC00963-213ENST00000622120 COL18A1P39060 1754 aa17.49■□□□□ 0.39
LINC00963-213ENST00000622120 NME9Q86XW9 330 aa17.49■□□□□ 0.39
LINC00963-213ENST00000622120 A0A1W2PP64 1363 aa17.49■□□□□ 0.39
LINC00963-213ENST00000622120 ARHGEF25Q86VW2 580 aa17.48■□□□□ 0.39
LINC00963-213ENST00000622120 ZRANB1Q9UGI0 708 aa17.48■□□□□ 0.39
LINC00963-213ENST00000622120 THRAP3Q9Y2W1 955 aaKnown RBP17.48■□□□□ 0.39
LINC00963-213ENST00000622120 USP31Q70CQ4 1352 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms