RNA–Protein interactions for RNA: ENST00000621987.4

FMR1-220, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-220ENST00000621987 MST1RQ04912 1400 aa17.38■□□□□ 0.37
FMR1-220ENST00000621987 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.38■□□□□ 0.37
FMR1-220ENST00000621987 PNISRQ8TF01 805 aaKnown RBP17.38■□□□□ 0.37
FMR1-220ENST00000621987 YTHDC1Q96MU7 727 aaKnown RBP17.38■□□□□ 0.37
FMR1-220ENST00000621987 GGNBP2Q9H3C7 697 aa17.38■□□□□ 0.37
FMR1-220ENST00000621987 PHF8Q9UPP1 1060 aa17.38■□□□□ 0.37
FMR1-220ENST00000621987 NGDNQ8NEJ9 315 aaKnown RBP17.37■□□□□ 0.37
FMR1-220ENST00000621987 KIF1AQ12756 1690 aa17.36■□□□□ 0.37
FMR1-220ENST00000621987 MSH6P52701 1360 aa17.36■□□□□ 0.37
FMR1-220ENST00000621987 ATF3P18847 181 aa17.35■□□□□ 0.37
FMR1-220ENST00000621987 NME9Q86XW9 330 aa17.35■□□□□ 0.37
FMR1-220ENST00000621987 TTC21AQ8NDW8 1320 aa17.35■□□□□ 0.37
FMR1-220ENST00000621987 CADPS2Q86UW7 1296 aa17.34■□□□□ 0.37
FMR1-220ENST00000621987 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
FMR1-220ENST00000621987 USP54Q70EL1 1684 aa17.34■□□□□ 0.37
FMR1-220ENST00000621987 ESCO1Q5FWF5 840 aa17.33■□□□□ 0.36
FMR1-220ENST00000621987 PIK3C2AO00443 1686 aa17.33■□□□□ 0.36
FMR1-220ENST00000621987 OVOS2A0A0J9YW53 1432 aa17.32■□□□□ 0.36
FMR1-220ENST00000621987 OVOS2Q6IE36 1432 aa17.32■□□□□ 0.36
FMR1-220ENST00000621987 FAM9BQ8IZU0 186 aa17.32■□□□□ 0.36
FMR1-220ENST00000621987 ORAI2Q96SN7 254 aa17.32■□□□□ 0.36
FMR1-220ENST00000621987 LTBP4Q8N2S1 1624 aa17.32■□□□□ 0.36
FMR1-220ENST00000621987 TNNT2P45379 298 aaPredicted RBP17.31■□□□□ 0.36
FMR1-220ENST00000621987 ZRANB1Q9UGI0 708 aa17.31■□□□□ 0.36
FMR1-220ENST00000621987 USP31Q70CQ4 1352 aa17.31■□□□□ 0.36
FMR1-220ENST00000621987 INSRP06213 1382 aa17.3■□□□□ 0.36
FMR1-220ENST00000621987 COG3Q96JB2 828 aa17.29■□□□□ 0.36
FMR1-220ENST00000621987 MARF1Q9Y4F3 1742 aaKnown RBP17.29■□□□□ 0.36
FMR1-220ENST00000621987 AATKQ6ZMQ8 1374 aa17.29■□□□□ 0.36
FMR1-220ENST00000621987 SHPRHQ149N8 1683 aa17.29■□□□□ 0.36
FMR1-220ENST00000621987 TRPM3Q9HCF6 1732 aaPredicted RBP17.29■□□□□ 0.36
FMR1-220ENST00000621987 MTHFSP49914 203 aa17.28■□□□□ 0.36
FMR1-220ENST00000621987 SMG6Q86US8 1419 aaKnown RBP17.28■□□□□ 0.36
FMR1-220ENST00000621987 COL3A1P02461 1466 aaPredicted RBP17.27■□□□□ 0.35
FMR1-220ENST00000621987 MAP2P11137 1827 aaKnown RBP17.26■□□□□ 0.35
FMR1-220ENST00000621987 PSME1Q06323 249 aa17.26■□□□□ 0.35
FMR1-220ENST00000621987 PNPLA6Q8IY17 1366 aa17.25■□□□□ 0.35
FMR1-220ENST00000621987 FOXO3O43524 673 aa17.25■□□□□ 0.35
FMR1-220ENST00000621987 POLKQ9UBT6 870 aa17.25■□□□□ 0.35
FMR1-220ENST00000621987 BLMP54132 1417 aaPredicted RBP17.24■□□□□ 0.35
FMR1-220ENST00000621987 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
FMR1-220ENST00000621987 SLAIN2Q9P270 581 aa17.23■□□□□ 0.35
FMR1-220ENST00000621987 ALS2Q96Q42 1657 aa17.22■□□□□ 0.35
FMR1-220ENST00000621987 CENPBP07199 599 aaPredicted RBP17.22■□□□□ 0.35
FMR1-220ENST00000621987 HNRNPUQ00839 825 aaKnown RBP eCLIP17.22■□□□□ 0.35
FMR1-220ENST00000621987 KRT28Q7Z3Y7 464 aa17.22■□□□□ 0.35
FMR1-220ENST00000621987 ADAMTS8Q9UP79 889 aa17.22■□□□□ 0.35
FMR1-220ENST00000621987 CDK12Q9NYV4 1490 aaPredicted RBP17.22■□□□□ 0.35
FMR1-220ENST00000621987 PAK3O75914 559 aaPredicted RBP17.21■□□□□ 0.35
FMR1-220ENST00000621987 FBLN1P23142 703 aa17.21■□□□□ 0.35
FMR1-220ENST00000621987 WDR43Q15061 677 aaKnown RBP eCLIP17.21■□□□□ 0.35
FMR1-220ENST00000621987 BRINP3Q76B58 766 aa17.21■□□□□ 0.35
FMR1-220ENST00000621987 PXDNQ92626 1479 aa17.21■□□□□ 0.35
FMR1-220ENST00000621987 NLRP6P59044 892 aa17.2■□□□□ 0.34
FMR1-220ENST00000621987 ABTB2Q8N961 1025 aa17.2■□□□□ 0.34
FMR1-220ENST00000621987 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
FMR1-220ENST00000621987 NPHP3Q7Z494 1330 aa17.19■□□□□ 0.34
FMR1-220ENST00000621987 EMILIN1Q9Y6C2 1016 aa17.19■□□□□ 0.34
FMR1-220ENST00000621987 XPCQ01831 940 aaPredicted RBP17.18■□□□□ 0.34
FMR1-220ENST00000621987 PEAK1Q9H792 1746 aa17.18■□□□□ 0.34
FMR1-220ENST00000621987 SLIT3O75094 1523 aa17.18■□□□□ 0.34
FMR1-220ENST00000621987 NFAT5O94916 1531 aa17.17■□□□□ 0.34
FMR1-220ENST00000621987 NHSL1Q5SYE7 1610 aa17.17■□□□□ 0.34
FMR1-220ENST00000621987 ZBED9Q6R2W3 1325 aa17.17■□□□□ 0.34
FMR1-220ENST00000621987 RRS1Q15050 365 aaKnown RBP17.16■□□□□ 0.34
FMR1-220ENST00000621987 NUTM2GQ5VZR2 741 aa17.16■□□□□ 0.34
FMR1-220ENST00000621987 USP19O94966 1318 aa17.16■□□□□ 0.34
FMR1-220ENST00000621987 DDX17Q92841 729 aaKnown RBP17.15■□□□□ 0.34
FMR1-220ENST00000621987 DIAPH1O60610 1272 aaKnown RBP17.15■□□□□ 0.34
FMR1-220ENST00000621987 TNS3Q68CZ2 1445 aa17.14■□□□□ 0.33
FMR1-220ENST00000621987 MAP3K19Q56UN5 1328 aa17.14■□□□□ 0.33
FMR1-220ENST00000621987 KIF24Q5T7B8 1368 aa17.14■□□□□ 0.33
FMR1-220ENST00000621987 PHRF1Q9P1Y6 1649 aaKnown RBP17.13■□□□□ 0.33
FMR1-220ENST00000621987 SOS2Q07890 1332 aaPredicted RBP17.13■□□□□ 0.33
FMR1-220ENST00000621987 PPM1GO15355 546 aaPredicted RBP17.13■□□□□ 0.33
FMR1-220ENST00000621987 NUDCQ9Y266 331 aa17.13■□□□□ 0.33
FMR1-220ENST00000621987 SPATA31A3Q5VYP0 1347 aa17.12■□□□□ 0.33
FMR1-220ENST00000621987 MED1Q15648 1581 aaPredicted RBP17.12■□□□□ 0.33
FMR1-220ENST00000621987 CRYBG1Q9Y4K1 1723 aa17.12■□□□□ 0.33
FMR1-220ENST00000621987 IL13P35225 146 aa17.12■□□□□ 0.33
FMR1-220ENST00000621987 KCNH5Q8NCM2 988 aa17.12■□□□□ 0.33
FMR1-220ENST00000621987 LTN1O94822 1766 aa17.11■□□□□ 0.33
FMR1-220ENST00000621987 FLT4P35916 1363 aa17.11■□□□□ 0.33
FMR1-220ENST00000621987 ROBO1Q9Y6N7 1651 aa17.1■□□□□ 0.33
FMR1-220ENST00000621987 RTL1A6NKG5 1358 aa17.1■□□□□ 0.33
FMR1-220ENST00000621987 SOX12O15370 315 aa17.1■□□□□ 0.33
FMR1-220ENST00000621987 ARHGEF10O15013 1369 aa17.09■□□□□ 0.33
FMR1-220ENST00000621987 U2AF1L5P0DN76 240 aaPredicted RBP17.09■□□□□ 0.33
FMR1-220ENST00000621987 U2AF1Q01081 240 aaKnown RBP eCLIP17.09■□□□□ 0.33
FMR1-220ENST00000621987 RGPD1P0DJD0 1748 aa17.09■□□□□ 0.33
FMR1-220ENST00000621987 AHDC1Q5TGY3 1603 aaPredicted RBP17.08■□□□□ 0.33
FMR1-220ENST00000621987 IQSEC2Q5JU85 1478 aa17.08■□□□□ 0.32
FMR1-220ENST00000621987 GCP02774 474 aa17.08■□□□□ 0.32
FMR1-220ENST00000621987 LMOD2Q6P5Q4 547 aa17.08■□□□□ 0.32
FMR1-220ENST00000621987 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.32
FMR1-220ENST00000621987 U2SURPO15042 1029 aaKnown RBP17.07■□□□□ 0.32
FMR1-220ENST00000621987 EIF4A2Q14240 407 aaKnown RBP17.07■□□□□ 0.32
FMR1-220ENST00000621987 HSP90AB2PQ58FF8 381 aa17.07■□□□□ 0.32
FMR1-220ENST00000621987 RUNDC1Q96C34 613 aa17.07■□□□□ 0.32
FMR1-220ENST00000621987 HOXC9P31274 260 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms