RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 PDCP20941 246 aa8.57□□□□□ -1.04
COLCA1-205ENST00000620864 NF2P35240 595 aa8.57□□□□□ -1.04
COLCA1-205ENST00000620864 EPS15P42566 896 aa8.57□□□□□ -1.04
COLCA1-205ENST00000620864 INTS3Q68E01 1043 aaKnown RBP8.57□□□□□ -1.04
COLCA1-205ENST00000620864 SEPT7Q16181 437 aaKnown RBP8.57□□□□□ -1.04
COLCA1-205ENST00000620864 MCTP1Q6DN14 999 aa8.57□□□□□ -1.04
COLCA1-205ENST00000620864 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.57□□□□□ -1.04
COLCA1-205ENST00000620864 MICALCLQ6ZW33 695 aa8.57□□□□□ -1.04
COLCA1-205ENST00000620864 TERF2IPQ9NYB0 399 aa8.57□□□□□ -1.04
COLCA1-205ENST00000620864 SMC3Q9UQE7 1217 aa8.57□□□□□ -1.04
COLCA1-205ENST00000620864 VPS37DQ86XT2 251 aa8.56□□□□□ -1.04
COLCA1-205ENST00000620864 PAF1Q8N7H5 531 aa8.56□□□□□ -1.04
COLCA1-205ENST00000620864 BRMS1Q9HCU9 246 aa8.56□□□□□ -1.04
COLCA1-205ENST00000620864 DDX19BQ9UMR2 479 aa8.56□□□□□ -1.04
COLCA1-205ENST00000620864 VGFO15240 615 aaPredicted RBP8.56□□□□□ -1.04
COLCA1-205ENST00000620864 HSPA5P11021 654 aaKnown RBP8.56□□□□□ -1.04
COLCA1-205ENST00000620864 CCDC112Q8NEF3 446 aa8.56□□□□□ -1.04
COLCA1-205ENST00000620864 FEZ1Q99689 392 aa8.56□□□□□ -1.04
COLCA1-205ENST00000620864 SNAPC4Q5SXM2 1469 aa8.56□□□□□ -1.04
COLCA1-205ENST00000620864 ZKSCAN2Q63HK3 967 aa8.56□□□□□ -1.04
COLCA1-205ENST00000620864 TSPY26PQ9H489 355 aa8.56□□□□□ -1.04
COLCA1-205ENST00000620864 DACH1Q9UI36 760 aa8.56□□□□□ -1.04
COLCA1-205ENST00000620864 DHX16O60231 1041 aaKnown RBP8.55□□□□□ -1.04
COLCA1-205ENST00000620864 XBP1P17861 261 aa8.55□□□□□ -1.04
COLCA1-205ENST00000620864 TRDNQ13061 729 aa8.55□□□□□ -1.04
COLCA1-205ENST00000620864 ILDR1Q86SU0 546 aaPredicted RBP8.55□□□□□ -1.04
COLCA1-205ENST00000620864 CLASRPQ8N2M8 674 aaKnown RBP8.55□□□□□ -1.04
COLCA1-205ENST00000620864 ZNHIT6Q9NWK9 470 aaKnown RBP8.55□□□□□ -1.04
COLCA1-205ENST00000620864 CCDC43Q96MW1 224 aaKnown RBP8.55□□□□□ -1.04
COLCA1-205ENST00000620864 ZMYND15Q9H091 742 aa8.55□□□□□ -1.04
COLCA1-205ENST00000620864 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.55□□□□□ -1.04
COLCA1-205ENST00000620864 FOXD4L1Q9NU39 408 aa8.55□□□□□ -1.04
COLCA1-205ENST00000620864 KAT6BQ8WYB5 2073 aa8.55□□□□□ -1.04
COLCA1-205ENST00000620864 SHTN1A0MZ66 631 aa8.55□□□□□ -1.04
COLCA1-205ENST00000620864 ADAMTS2O95450 1211 aa8.55□□□□□ -1.04
COLCA1-205ENST00000620864 MYBBP1AQ9BQG0 1328 aaKnown RBP8.55□□□□□ -1.04
COLCA1-205ENST00000620864 TXLNAP40222 546 aa8.54□□□□□ -1.04
COLCA1-205ENST00000620864 HSP90AB4PQ58FF6 505 aa8.54□□□□□ -1.04
COLCA1-205ENST00000620864 CBFA2T2O43439 604 aa8.54□□□□□ -1.04
COLCA1-205ENST00000620864 RRP1P56182 461 aaKnown RBP8.54□□□□□ -1.04
COLCA1-205ENST00000620864 SLC4A10Q6U841 1118 aa8.54□□□□□ -1.04
COLCA1-205ENST00000620864 GPATCH11Q8N954 259 aa8.54□□□□□ -1.04
COLCA1-205ENST00000620864 HDAC9Q9UKV0 1011 aa8.54□□□□□ -1.04
COLCA1-205ENST00000620864 GBP2P32456 591 aaPredicted RBP8.54□□□□□ -1.04
COLCA1-205ENST00000620864 PPM1EQ8WY54 764 aa8.54□□□□□ -1.04
COLCA1-205ENST00000620864 CCDC91Q7Z6B0 441 aa8.54□□□□□ -1.04
COLCA1-205ENST00000620864 PSMA5P28066 241 aa8.54□□□□□ -1.04
COLCA1-205ENST00000620864 MAP9Q49MG5 647 aa8.54□□□□□ -1.04
COLCA1-205ENST00000620864 NOL8Q76FK4 1167 aaKnown RBP8.54□□□□□ -1.04
COLCA1-205ENST00000620864 SIN3AQ96ST3 1273 aa8.54□□□□□ -1.04
COLCA1-205ENST00000620864 ARHGAP5Q13017 1502 aa8.53□□□□□ -1.04
COLCA1-205ENST00000620864 ERICH2A1L162 156 aa8.53□□□□□ -1.04
COLCA1-205ENST00000620864 TRIM5Q9C035 493 aa8.53□□□□□ -1.04
COLCA1-205ENST00000620864 NFKBIBQ15653 356 aa8.53□□□□□ -1.04
COLCA1-205ENST00000620864 LRRCC1Q9C099 1032 aa8.53□□□□□ -1.04
COLCA1-205ENST00000620864 KINO60870 393 aaKnown RBP8.53□□□□□ -1.04
COLCA1-205ENST00000620864 CCDC146Q8IYE0 955 aa8.53□□□□□ -1.04
COLCA1-205ENST00000620864 NCAPD3P42695 1498 aa8.53□□□□□ -1.04
COLCA1-205ENST00000620864 MAGEC2Q9UBF1 373 aaPredicted RBP8.53□□□□□ -1.04
COLCA1-205ENST00000620864 NLRP2Q9NX02 1062 aa8.52□□□□□ -1.04
COLCA1-205ENST00000620864 NINLQ9Y2I6 1382 aa8.52□□□□□ -1.04
COLCA1-205ENST00000620864 RBM10P98175 930 aaKnown RBP8.52□□□□□ -1.05
COLCA1-205ENST00000620864 ENOX2Q16206 610 aaKnown RBP8.52□□□□□ -1.05
COLCA1-205ENST00000620864 ANKRD45Q5TZF3 282 aa8.52□□□□□ -1.05
COLCA1-205ENST00000620864 JMYQ8N9B5 988 aa8.52□□□□□ -1.05
COLCA1-205ENST00000620864 ERC2O15083 957 aa8.52□□□□□ -1.05
COLCA1-205ENST00000620864 LUZP1Q86V48 1076 aa8.52□□□□□ -1.05
COLCA1-205ENST00000620864 CFAP57Q96MR6 1250 aa8.52□□□□□ -1.05
COLCA1-205ENST00000620864 EP400NLQ6ZTU2 488 aa8.52□□□□□ -1.05
COLCA1-205ENST00000620864 TTC5Q8N0Z6 440 aa8.52□□□□□ -1.05
COLCA1-205ENST00000620864 RILPL2Q969X0 211 aa8.52□□□□□ -1.05
COLCA1-205ENST00000620864 AFAP1Q8N556 730 aa8.52□□□□□ -1.05
COLCA1-205ENST00000620864 ZNF396Q96N95 335 aaPredicted RBP8.52□□□□□ -1.05
COLCA1-205ENST00000620864 CCDC85CA6NKD9 419 aa8.51□□□□□ -1.05
COLCA1-205ENST00000620864 STAMBPO95630 424 aa8.51□□□□□ -1.05
COLCA1-205ENST00000620864 COG3Q96JB2 828 aa8.51□□□□□ -1.05
COLCA1-205ENST00000620864 ANO2Q9NQ90 1003 aa8.51□□□□□ -1.05
COLCA1-205ENST00000620864 CCDC192P0DO97 292 aa8.51□□□□□ -1.05
COLCA1-205ENST00000620864 FOXD4L5Q5VV16 416 aaPredicted RBP8.51□□□□□ -1.05
COLCA1-205ENST00000620864 FOXD4L4Q8WXT5 416 aaPredicted RBP8.51□□□□□ -1.05
COLCA1-205ENST00000620864 TRAK2O60296 914 aa8.51□□□□□ -1.05
COLCA1-205ENST00000620864 TTLL5Q6EMB2 1281 aa8.51□□□□□ -1.05
COLCA1-205ENST00000620864 SYCP1Q15431 976 aa8.51□□□□□ -1.05
COLCA1-205ENST00000620864 CCDC181Q5TID7 509 aa8.51□□□□□ -1.05
COLCA1-205ENST00000620864 SDF4Q9BRK5 362 aa8.51□□□□□ -1.05
COLCA1-205ENST00000620864 API5Q9BZZ5 524 aaKnown RBP8.51□□□□□ -1.05
COLCA1-205ENST00000620864 PDILTQ8N807 584 aa8.5□□□□□ -1.05
COLCA1-205ENST00000620864 PDCL3Q9H2J4 239 aa8.5□□□□□ -1.05
COLCA1-205ENST00000620864 POTEB2H3BUK9 544 aa8.5□□□□□ -1.05
COLCA1-205ENST00000620864 GIGYF1O75420 1035 aaPredicted RBP8.5□□□□□ -1.05
COLCA1-205ENST00000620864 SETSIPP0DME0 302 aa8.5□□□□□ -1.05
COLCA1-205ENST00000620864 UQCRHLA0A096LP55 91 aa8.5□□□□□ -1.05
COLCA1-205ENST00000620864 UQCRHP07919 91 aa8.5□□□□□ -1.05
COLCA1-205ENST00000620864 C22orf23Q9BZE7 217 aa8.5□□□□□ -1.05
COLCA1-205ENST00000620864 IRX3P78415 501 aaPredicted RBP8.5□□□□□ -1.05
COLCA1-205ENST00000620864 WWC2Q6AWC2 1192 aa8.5□□□□□ -1.05
COLCA1-205ENST00000620864 GPRASP1Q5JY77 1395 aa8.5□□□□□ -1.05
COLCA1-205ENST00000620864 MYO15BQ96JP2 1530 aa8.5□□□□□ -1.05
COLCA1-205ENST00000620864 HIP1O00291 1037 aa8.49□□□□□ -1.05
COLCA1-205ENST00000620864 STIM1Q13586 685 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms