RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 MTHFSP49914 203 aa22.14■■□□□ 1.13
PCGF3-213ENST00000620529 COG3Q96JB2 828 aa22.14■■□□□ 1.13
PCGF3-213ENST00000620529 C19orf44Q9H6X5 657 aa22.14■■□□□ 1.13
PCGF3-213ENST00000620529 TMEM94Q12767 1356 aa22.14■■□□□ 1.13
PCGF3-213ENST00000620529 ZBED9Q6R2W3 1325 aa22.13■■□□□ 1.13
PCGF3-213ENST00000620529 TTC21AQ8NDW8 1320 aa22.12■■□□□ 1.13
PCGF3-213ENST00000620529 PHF8Q9UPP1 1060 aa22.12■■□□□ 1.13
PCGF3-213ENST00000620529 MAP2P11137 1827 aaKnown RBP22.12■■□□□ 1.13
PCGF3-213ENST00000620529 SCAF1Q9H7N4 1312 aaKnown RBP22.11■■□□□ 1.13
PCGF3-213ENST00000620529 DMRT2Q9Y5R5 561 aa22.11■■□□□ 1.13
PCGF3-213ENST00000620529 DCCP43146 1447 aa22.1■■□□□ 1.13
PCGF3-213ENST00000620529 ESCO1Q5FWF5 840 aa22.1■■□□□ 1.13
PCGF3-213ENST00000620529 BLMP54132 1417 aaPredicted RBP22.1■■□□□ 1.13
PCGF3-213ENST00000620529 ADAMTS8Q9UP79 889 aa22.09■■□□□ 1.13
PCGF3-213ENST00000620529 SSH2Q76I76 1423 aa22.09■■□□□ 1.13
PCGF3-213ENST00000620529 SHPRHQ149N8 1683 aa22.09■■□□□ 1.13
PCGF3-213ENST00000620529 ATF3P18847 181 aa22.09■■□□□ 1.13
PCGF3-213ENST00000620529 XIRP1Q702N8 1843 aaKnown RBP22.07■■□□□ 1.12
PCGF3-213ENST00000620529 ZRANB1Q9UGI0 708 aa22.07■■□□□ 1.12
PCGF3-213ENST00000620529 KIF1AQ12756 1690 aa22.07■■□□□ 1.12
PCGF3-213ENST00000620529 MSH6P52701 1360 aa22.06■■□□□ 1.12
PCGF3-213ENST00000620529 OVOS2A0A0J9YW53 1432 aa22.06■■□□□ 1.12
PCGF3-213ENST00000620529 OVOS2Q6IE36 1432 aa22.06■■□□□ 1.12
PCGF3-213ENST00000620529 ZNF335Q9H4Z2 1342 aaPredicted RBP22.05■■□□□ 1.12
PCGF3-213ENST00000620529 AATKQ6ZMQ8 1374 aa22.05■■□□□ 1.12
PCGF3-213ENST00000620529 C1orf167Q5SNV9 1468 aa22.04■■□□□ 1.12
PCGF3-213ENST00000620529 PIK3C2AO00443 1686 aa22.04■■□□□ 1.12
PCGF3-213ENST00000620529 CADPS2Q86UW7 1296 aa22.03■■□□□ 1.12
PCGF3-213ENST00000620529 PSME1Q06323 249 aa22.03■■□□□ 1.12
PCGF3-213ENST00000620529 LRRC7Q96NW7 1537 aa22.02■■□□□ 1.12
PCGF3-213ENST00000620529 PAK3O75914 559 aaPredicted RBP22.02■■□□□ 1.12
PCGF3-213ENST00000620529 ORAI2Q96SN7 254 aa22.02■■□□□ 1.12
PCGF3-213ENST00000620529 NUDCQ9Y266 331 aa22.02■■□□□ 1.12
PCGF3-213ENST00000620529 MST1RQ04912 1400 aa22.01■■□□□ 1.11
PCGF3-213ENST00000620529 POLKQ9UBT6 870 aa22.01■■□□□ 1.11
PCGF3-213ENST00000620529 USP31Q70CQ4 1352 aa22.01■■□□□ 1.11
PCGF3-213ENST00000620529 PPM1GO15355 546 aaPredicted RBP22■■□□□ 1.11
PCGF3-213ENST00000620529 SMG6Q86US8 1419 aaKnown RBP22■■□□□ 1.11
PCGF3-213ENST00000620529 USP54Q70EL1 1684 aa22■■□□□ 1.11
PCGF3-213ENST00000620529 COL3A1P02461 1466 aaPredicted RBP22■■□□□ 1.11
PCGF3-213ENST00000620529 SENP3-EIF4A1A0A087X0R7 540 aa21.99■■□□□ 1.11
PCGF3-213ENST00000620529 PNPLA6Q8IY17 1366 aa21.99■■□□□ 1.11
PCGF3-213ENST00000620529 FBLN1P23142 703 aa21.98■■□□□ 1.11
PCGF3-213ENST00000620529 CDK12Q9NYV4 1490 aaPredicted RBP21.98■■□□□ 1.11
PCGF3-213ENST00000620529 NLRP6P59044 892 aa21.98■■□□□ 1.11
PCGF3-213ENST00000620529 ABTB2Q8N961 1025 aa21.98■■□□□ 1.11
PCGF3-213ENST00000620529 DIAPH1O60610 1272 aaKnown RBP21.97■■□□□ 1.11
PCGF3-213ENST00000620529 EMILIN1Q9Y6C2 1016 aa21.97■■□□□ 1.11
PCGF3-213ENST00000620529 FOXO3O43524 673 aa21.96■■□□□ 1.11
PCGF3-213ENST00000620529 SALL2Q9Y467 1007 aaPredicted RBP21.96■■□□□ 1.11
PCGF3-213ENST00000620529 RRS1Q15050 365 aaKnown RBP21.96■■□□□ 1.11
PCGF3-213ENST00000620529 CCDC146Q8IYE0 955 aa21.96■■□□□ 1.11
PCGF3-213ENST00000620529 U2AF1L5P0DN76 240 aaPredicted RBP21.95■■□□□ 1.1
PCGF3-213ENST00000620529 U2AF1Q01081 240 aaKnown RBP eCLIP21.95■■□□□ 1.1
PCGF3-213ENST00000620529 MARF1Q9Y4F3 1742 aaKnown RBP21.95■■□□□ 1.1
PCGF3-213ENST00000620529 U2SURPO15042 1029 aaKnown RBP21.94■■□□□ 1.1
PCGF3-213ENST00000620529 SOX12O15370 315 aa21.92■■□□□ 1.1
PCGF3-213ENST00000620529 TRPM3Q9HCF6 1732 aaPredicted RBP21.92■■□□□ 1.1
PCGF3-213ENST00000620529 NUTM2GQ5VZR2 741 aa21.92■■□□□ 1.1
PCGF3-213ENST00000620529 KRT28Q7Z3Y7 464 aa21.91■■□□□ 1.1
PCGF3-213ENST00000620529 RUNDC1Q96C34 613 aa21.91■■□□□ 1.1
PCGF3-213ENST00000620529 XPCQ01831 940 aaPredicted RBP21.9■■□□□ 1.1
PCGF3-213ENST00000620529 PDE3BQ13370 1112 aa21.9■■□□□ 1.1
PCGF3-213ENST00000620529 APAF1O14727 1248 aa21.89■■□□□ 1.09
PCGF3-213ENST00000620529 NGEFQ8N5V2 710 aa21.89■■□□□ 1.09
PCGF3-213ENST00000620529 PNNQ9H307 717 aaKnown RBP21.88■■□□□ 1.09
PCGF3-213ENST00000620529 NPHP3Q7Z494 1330 aa21.88■■□□□ 1.09
PCGF3-213ENST00000620529 PEAK1Q9H792 1746 aa21.88■■□□□ 1.09
PCGF3-213ENST00000620529 GTF3C3Q9Y5Q9 886 aa21.88■■□□□ 1.09
PCGF3-213ENST00000620529 MAP3K19Q56UN5 1328 aa21.86■■□□□ 1.09
PCGF3-213ENST00000620529 LMOD2Q6P5Q4 547 aa21.86■■□□□ 1.09
PCGF3-213ENST00000620529 SBNO1A3KN83 1393 aa21.85■■□□□ 1.09
PCGF3-213ENST00000620529 LTN1O94822 1766 aa21.85■■□□□ 1.09
PCGF3-213ENST00000620529 IL13P35225 146 aa21.85■■□□□ 1.09
PCGF3-213ENST00000620529 FLT4P35916 1363 aa21.85■■□□□ 1.09
PCGF3-213ENST00000620529 AMPHP49418 695 aa21.85■■□□□ 1.09
PCGF3-213ENST00000620529 ALS2Q96Q42 1657 aa21.84■■□□□ 1.09
PCGF3-213ENST00000620529 IQSEC2Q5JU85 1478 aa21.84■■□□□ 1.09
PCGF3-213ENST00000620529 KCNH5Q8NCM2 988 aa21.84■■□□□ 1.09
PCGF3-213ENST00000620529 SLAIN2Q9P270 581 aa21.84■■□□□ 1.09
PCGF3-213ENST00000620529 MAPK8IP3Q9UPT6 1336 aa21.84■■□□□ 1.09
PCGF3-213ENST00000620529 KIF24Q5T7B8 1368 aa21.83■■□□□ 1.09
PCGF3-213ENST00000620529 NEFMP07197 916 aa21.83■■□□□ 1.08
PCGF3-213ENST00000620529 FCHSD2O94868 740 aa21.82■■□□□ 1.08
PCGF3-213ENST00000620529 BRINP3Q76B58 766 aa21.82■■□□□ 1.08
PCGF3-213ENST00000620529 TCP11L2Q8N4U5 519 aa21.82■■□□□ 1.08
PCGF3-213ENST00000620529 NFAT5O94916 1531 aa21.8■■□□□ 1.08
PCGF3-213ENST00000620529 HSP90AB2PQ58FF8 381 aa21.8■■□□□ 1.08
PCGF3-213ENST00000620529 DDX17Q92841 729 aaKnown RBP21.8■■□□□ 1.08
PCGF3-213ENST00000620529 SLIT3O75094 1523 aa21.8■■□□□ 1.08
PCGF3-213ENST00000620529 EIF4A2Q14240 407 aaKnown RBP21.79■■□□□ 1.08
PCGF3-213ENST00000620529 PLEKHF1Q96S99 279 aa21.79■■□□□ 1.08
PCGF3-213ENST00000620529 RTL1A6NKG5 1358 aa21.79■■□□□ 1.08
PCGF3-213ENST00000620529 PXDNQ92626 1479 aa21.79■■□□□ 1.08
PCGF3-213ENST00000620529 ZNF521Q96K83 1311 aa21.79■■□□□ 1.08
PCGF3-213ENST00000620529 TNS3Q68CZ2 1445 aa21.78■■□□□ 1.08
PCGF3-213ENST00000620529 GOLGA2Q08379 1002 aa21.78■■□□□ 1.08
PCGF3-213ENST00000620529 NEUROD2Q15784 382 aa21.78■■□□□ 1.08
PCGF3-213ENST00000620529 LTBP4Q8N2S1 1624 aa21.77■■□□□ 1.08
PCGF3-213ENST00000620529 HMOX1P09601 288 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms