RNA–Protein interactions for RNA: ENST00000620364.4

COL19A1-205, Transcript of collagen type XIX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL19A1, Length 6,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-205ENST00000620364 RRP12Q5JTH9 1297 aaKnown RBP14.9□□□□□ -0.02
COL19A1-205ENST00000620364 PANK1Q8TE04 598 aa14.9□□□□□ -0.02
COL19A1-205ENST00000620364 NESP48681 1621 aa14.9□□□□□ -0.02
COL19A1-205ENST00000620364 ATP2B2Q01814 1243 aa14.89□□□□□ -0.03
COL19A1-205ENST00000620364 CCDC73Q6ZRK6 1079 aa14.89□□□□□ -0.03
COL19A1-205ENST00000620364 C9orf84Q5VXU9 1444 aa14.89□□□□□ -0.03
COL19A1-205ENST00000620364 CDC45O75419 566 aa14.89□□□□□ -0.03
COL19A1-205ENST00000620364 PNISRQ8TF01 805 aaKnown RBP14.89□□□□□ -0.03
COL19A1-205ENST00000620364 CC2D2AQ9P2K1 1620 aa14.89□□□□□ -0.03
COL19A1-205ENST00000620364 ZNF592Q92610 1267 aa14.89□□□□□ -0.03
COL19A1-205ENST00000620364 ZNF530Q6P9A1 599 aaPredicted RBP14.89□□□□□ -0.03
COL19A1-205ENST00000620364 CABP1Q9NZU7 370 aa14.89□□□□□ -0.03
COL19A1-205ENST00000620364 PRDM11Q9NQV5 511 aa14.88□□□□□ -0.03
COL19A1-205ENST00000620364 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.88□□□□□ -0.03
COL19A1-205ENST00000620364 MYL6BP14649 208 aa14.88□□□□□ -0.03
COL19A1-205ENST00000620364 HECW1Q76N89 1606 aa14.88□□□□□ -0.03
COL19A1-205ENST00000620364 RAPGEF3O95398 923 aa14.87□□□□□ -0.03
COL19A1-205ENST00000620364 EHBP1L1Q8N3D4 1523 aa14.87□□□□□ -0.03
COL19A1-205ENST00000620364 HIP1O00291 1037 aa14.87□□□□□ -0.03
COL19A1-205ENST00000620364 XPCQ01831 940 aaPredicted RBP14.87□□□□□ -0.03
COL19A1-205ENST00000620364 TWISTNBQ3B726 338 aaPredicted RBP14.87□□□□□ -0.03
COL19A1-205ENST00000620364 CDK5RAP3Q96JB5 506 aa14.87□□□□□ -0.03
COL19A1-205ENST00000620364 SLC26A8Q96RN1 970 aa14.87□□□□□ -0.03
COL19A1-205ENST00000620364 OLFM4Q6UX06 510 aa14.87□□□□□ -0.03
COL19A1-205ENST00000620364 SULT6B1Q6IMI4 303 aa14.87□□□□□ -0.03
COL19A1-205ENST00000620364 ERBINQ96RT1 1412 aa14.86□□□□□ -0.03
COL19A1-205ENST00000620364 SLC52A1Q9NWF4 448 aa14.86□□□□□ -0.03
COL19A1-205ENST00000620364 TNNT3P45378 269 aaPredicted RBP14.86□□□□□ -0.03
COL19A1-205ENST00000620364 TCP11L2Q8N4U5 519 aa14.86□□□□□ -0.03
COL19A1-205ENST00000620364 ADAMTS8Q9UP79 889 aa14.86□□□□□ -0.03
COL19A1-205ENST00000620364 HDGFL1Q5TGJ6 251 aa14.85□□□□□ -0.03
COL19A1-205ENST00000620364 ZNF428Q96B54 188 aa14.85□□□□□ -0.03
COL19A1-205ENST00000620364 GNAI2P04899 355 aa14.85□□□□□ -0.03
COL19A1-205ENST00000620364 AAMPQ13685 434 aa14.85□□□□□ -0.03
COL19A1-205ENST00000620364 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.85□□□□□ -0.03
COL19A1-205ENST00000620364 PPP2R1AP30153 589 aa14.85□□□□□ -0.03
COL19A1-205ENST00000620364 BICDL1Q6ZP65 573 aa14.85□□□□□ -0.03
COL19A1-205ENST00000620364 STK11IPQ8N1F8 1099 aa14.85□□□□□ -0.03
COL19A1-205ENST00000620364 MPHOSPH8Q99549 860 aa14.85□□□□□ -0.03
COL19A1-205ENST00000620364 GPS2Q13227 327 aa14.84□□□□□ -0.03
COL19A1-205ENST00000620364 HFM1A2PYH4 1435 aa14.84□□□□□ -0.03
COL19A1-205ENST00000620364 HOMER1Q86YM7 354 aa14.84□□□□□ -0.03
COL19A1-205ENST00000620364 ZFYVE27Q5T4F4 411 aa14.84□□□□□ -0.03
COL19A1-205ENST00000620364 SLC4A2P04920 1241 aa14.84□□□□□ -0.03
COL19A1-205ENST00000620364 CFTRP13569 1480 aa14.84□□□□□ -0.03
COL19A1-205ENST00000620364 EXOSC9Q06265 439 aaKnown RBP14.83□□□□□ -0.03
COL19A1-205ENST00000620364 SIL1Q9H173 461 aa14.83□□□□□ -0.03
COL19A1-205ENST00000620364 TSHZ2Q9NRE2 1034 aa14.83□□□□□ -0.03
COL19A1-205ENST00000620364 BTBD11A6QL63 1104 aa14.83□□□□□ -0.04
COL19A1-205ENST00000620364 NUCB2P80303 420 aa14.83□□□□□ -0.04
COL19A1-205ENST00000620364 BRD4O60885 1362 aaPredicted RBP14.83□□□□□ -0.04
COL19A1-205ENST00000620364 KRT18P05783 430 aaKnown RBP14.82□□□□□ -0.04
COL19A1-205ENST00000620364 CCDC57Q2TAC2 916 aa14.82□□□□□ -0.04
COL19A1-205ENST00000620364 EFCAB5A4FU69 1503 aa14.82□□□□□ -0.04
COL19A1-205ENST00000620364 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
COL19A1-205ENST00000620364 C22orf23Q9BZE7 217 aa14.82□□□□□ -0.04
COL19A1-205ENST00000620364 NACAP1Q9BZK3 213 aa14.82□□□□□ -0.04
COL19A1-205ENST00000620364 C1orf115Q9H7X2 142 aa14.82□□□□□ -0.04
COL19A1-205ENST00000620364 HMGB2P26583 209 aaKnown RBP14.81□□□□□ -0.04
COL19A1-205ENST00000620364 NOB1Q9ULX3 412 aaKnown RBP14.81□□□□□ -0.04
COL19A1-205ENST00000620364 OFD1O75665 1012 aa14.81□□□□□ -0.04
COL19A1-205ENST00000620364 HSP90AB2PQ58FF8 381 aa14.81□□□□□ -0.04
COL19A1-205ENST00000620364 CHMP5Q9NZZ3 219 aa14.81□□□□□ -0.04
COL19A1-205ENST00000620364 NAT10Q9H0A0 1025 aaKnown RBP14.81□□□□□ -0.04
COL19A1-205ENST00000620364 RPGRIP1LQ68CZ1 1315 aa14.8□□□□□ -0.04
COL19A1-205ENST00000620364 ATP2B1P20020 1258 aa14.8□□□□□ -0.04
COL19A1-205ENST00000620364 CCT4P50991 539 aaKnown RBP14.8□□□□□ -0.04
COL19A1-205ENST00000620364 ZSCAN29Q8IWY8 852 aaPredicted RBP14.8□□□□□ -0.04
COL19A1-205ENST00000620364 SLC12A5Q9H2X9 1139 aa14.8□□□□□ -0.04
COL19A1-205ENST00000620364 TXLNAP40222 546 aa14.8□□□□□ -0.04
COL19A1-205ENST00000620364 SETQ01105 290 aaPredicted RBP14.8□□□□□ -0.04
COL19A1-205ENST00000620364 ZSCAN25Q6NSZ9 544 aa14.8□□□□□ -0.04
COL19A1-205ENST00000620364 CCDC69A6NI79 296 aa14.79□□□□□ -0.04
COL19A1-205ENST00000620364 ZC3H6P61129 1189 aaKnown RBP14.79□□□□□ -0.04
COL19A1-205ENST00000620364 RRS1Q15050 365 aaKnown RBP14.79□□□□□ -0.04
COL19A1-205ENST00000620364 PDILTQ8N807 584 aa14.79□□□□□ -0.04
COL19A1-205ENST00000620364 NBPF1Q3BBV0 1214 aa14.79□□□□□ -0.04
COL19A1-205ENST00000620364 PATL2C9JE40 543 aaKnown RBP14.78□□□□□ -0.04
COL19A1-205ENST00000620364 SRCIN1Q9C0H9 1055 aa14.78□□□□□ -0.04
COL19A1-205ENST00000620364 TOPBP1Q92547 1522 aa14.78□□□□□ -0.04
COL19A1-205ENST00000620364 KIAA1107Q9UPP5 1409 aa14.78□□□□□ -0.04
COL19A1-205ENST00000620364 TSR2Q969E8 191 aaKnown RBP14.78□□□□□ -0.04
COL19A1-205ENST00000620364 PAF1Q8N7H5 531 aa14.77□□□□□ -0.04
COL19A1-205ENST00000620364 MAGEC2Q9UBF1 373 aaPredicted RBP14.77□□□□□ -0.04
COL19A1-205ENST00000620364 TROQ12816 1431 aaPredicted RBP14.77□□□□□ -0.04
COL19A1-205ENST00000620364 IGHMBP2P38935 993 aaKnown RBP14.77□□□□□ -0.05
COL19A1-205ENST00000620364 MPHOSPH10O00566 681 aaKnown RBP14.77□□□□□ -0.05
COL19A1-205ENST00000620364 STARD3NLO95772 234 aa14.77□□□□□ -0.05
COL19A1-205ENST00000620364 MAP4K4O95819 1239 aaPredicted RBP14.77□□□□□ -0.05
COL19A1-205ENST00000620364 KCNH5Q8NCM2 988 aa14.76□□□□□ -0.05
COL19A1-205ENST00000620364 SDF4Q9BRK5 362 aa14.76□□□□□ -0.05
COL19A1-205ENST00000620364 SOGA3Q5TF21 947 aa14.76□□□□□ -0.05
COL19A1-205ENST00000620364 FKBP4Q02790 459 aaKnown RBP eCLIP14.76□□□□□ -0.05
COL19A1-205ENST00000620364 LRRCC1Q9C099 1032 aa14.76□□□□□ -0.05
COL19A1-205ENST00000620364 RAI14Q9P0K7 980 aa14.76□□□□□ -0.05
COL19A1-205ENST00000620364 ZPR1O75312 459 aa14.76□□□□□ -0.05
COL19A1-205ENST00000620364 SYCP1Q15431 976 aa14.76□□□□□ -0.05
COL19A1-205ENST00000620364 ATAD2Q6PL18 1390 aa14.75□□□□□ -0.05
COL19A1-205ENST00000620364 GCC1Q96CN9 775 aa14.75□□□□□ -0.05
COL19A1-205ENST00000620364 ZNF396Q96N95 335 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms