RNA–Protein interactions for RNA: ENST00000620267.1

PKD1L3-201, Transcript of polycystin 1 like 3, transient receptor potential channel interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD1L3, Length 5,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1L3-201ENST00000620267 USP35Q9P2H5 1018 aa12.21□□□□□ -0.46
PKD1L3-201ENST00000620267 HDGFL1Q5TGJ6 251 aa12.2□□□□□ -0.46
PKD1L3-201ENST00000620267 CNTROBQ8N137 903 aa12.2□□□□□ -0.46
PKD1L3-201ENST00000620267 CEP89Q96ST8 783 aa12.2□□□□□ -0.46
PKD1L3-201ENST00000620267 PDE3AQ14432 1141 aa12.2□□□□□ -0.46
PKD1L3-201ENST00000620267 SAFBQ15424 915 aaKnown RBP eCLIP12.2□□□□□ -0.46
PKD1L3-201ENST00000620267 SLC3A2P08195 630 aaKnown RBP12.19□□□□□ -0.46
PKD1L3-201ENST00000620267 PDE4AP27815 886 aa12.19□□□□□ -0.46
PKD1L3-201ENST00000620267 GOLGA6L3A6NEY3 463 aa12.19□□□□□ -0.46
PKD1L3-201ENST00000620267 PSMA5P28066 241 aa12.19□□□□□ -0.46
PKD1L3-201ENST00000620267 NFXL1Q6ZNB6 911 aa12.19□□□□□ -0.46
PKD1L3-201ENST00000620267 DHX16O60231 1041 aaKnown RBP12.19□□□□□ -0.46
PKD1L3-201ENST00000620267 TPD52L1Q16890 204 aaPredicted RBP12.19□□□□□ -0.46
PKD1L3-201ENST00000620267 NCOA1Q15788 1441 aa12.19□□□□□ -0.46
PKD1L3-201ENST00000620267 TSR1Q2NL82 804 aaKnown RBP12.19□□□□□ -0.46
PKD1L3-201ENST00000620267 GNAI2P04899 355 aa12.18□□□□□ -0.46
PKD1L3-201ENST00000620267 TPM3P06753 285 aa12.18□□□□□ -0.46
PKD1L3-201ENST00000620267 SART3Q15020 963 aaKnown RBP12.18□□□□□ -0.46
PKD1L3-201ENST00000620267 GCC1Q96CN9 775 aa12.18□□□□□ -0.46
PKD1L3-201ENST00000620267 CWC22Q9HCG8 908 aaKnown RBP12.18□□□□□ -0.46
PKD1L3-201ENST00000620267 UNC13AQ9UPW8 1703 aa12.18□□□□□ -0.46
PKD1L3-201ENST00000620267 CDC45O75419 566 aa12.18□□□□□ -0.46
PKD1L3-201ENST00000620267 TPM1P09493 284 aa12.18□□□□□ -0.46
PKD1L3-201ENST00000620267 NBPF8Q3BBV2 869 aa12.18□□□□□ -0.46
PKD1L3-201ENST00000620267 NUTM2BA6NNL0 878 aaPredicted RBP12.18□□□□□ -0.46
PKD1L3-201ENST00000620267 NUTM2EB1AL46 878 aaPredicted RBP12.18□□□□□ -0.46
PKD1L3-201ENST00000620267 XBP1P17861 261 aa12.18□□□□□ -0.46
PKD1L3-201ENST00000620267 NUTM2AQ8IVF1 878 aaPredicted RBP12.18□□□□□ -0.46
PKD1L3-201ENST00000620267 WASHC4Q2M389 1173 aa12.17□□□□□ -0.46
PKD1L3-201ENST00000620267 AMOTQ4VCS5 1084 aa12.17□□□□□ -0.46
PKD1L3-201ENST00000620267 BRMS1Q9HCU9 246 aa12.17□□□□□ -0.46
PKD1L3-201ENST00000620267 KLHL34Q8N239 644 aa12.17□□□□□ -0.46
PKD1L3-201ENST00000620267 ANKRD20A12PQ8NF67 263 aa12.17□□□□□ -0.46
PKD1L3-201ENST00000620267 PLCH2O75038 1416 aa12.16□□□□□ -0.46
PKD1L3-201ENST00000620267 RAPGEF6Q8TEU7 1601 aa12.16□□□□□ -0.46
PKD1L3-201ENST00000620267 EXOSC9Q06265 439 aaKnown RBP12.16□□□□□ -0.46
PKD1L3-201ENST00000620267 SRCIN1Q9C0H9 1055 aa12.16□□□□□ -0.46
PKD1L3-201ENST00000620267 NSD2O96028 1365 aa12.16□□□□□ -0.46
PKD1L3-201ENST00000620267 RAD21O60216 631 aa12.16□□□□□ -0.46
PKD1L3-201ENST00000620267 CCDC158Q5M9N0 1113 aa12.16□□□□□ -0.46
PKD1L3-201ENST00000620267 MCTP1Q6DN14 999 aa12.16□□□□□ -0.46
PKD1L3-201ENST00000620267 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.16□□□□□ -0.46
PKD1L3-201ENST00000620267 PHF8Q9UPP1 1060 aa12.16□□□□□ -0.46
PKD1L3-201ENST00000620267 SURF6O75683 361 aaKnown RBP12.16□□□□□ -0.46
PKD1L3-201ENST00000620267 TNRQ92752 1358 aa12.15□□□□□ -0.46
PKD1L3-201ENST00000620267 DDX54Q8TDD1 881 aaKnown RBP12.15□□□□□ -0.46
PKD1L3-201ENST00000620267 NSD3Q9BZ95 1437 aa12.15□□□□□ -0.46
PKD1L3-201ENST00000620267 GOLGA6L19H0YKK7 550 aa12.15□□□□□ -0.46
PKD1L3-201ENST00000620267 CCDC27Q2M243 656 aa12.15□□□□□ -0.46
PKD1L3-201ENST00000620267 ABCC11Q96J66 1382 aa12.15□□□□□ -0.46
PKD1L3-201ENST00000620267 STARD3NLO95772 234 aa12.15□□□□□ -0.47
PKD1L3-201ENST00000620267 FSD1Q9BTV5 496 aa12.15□□□□□ -0.47
PKD1L3-201ENST00000620267 NUCB2P80303 420 aa12.14□□□□□ -0.47
PKD1L3-201ENST00000620267 NOC3LQ8WTT2 800 aaKnown RBP12.14□□□□□ -0.47
PKD1L3-201ENST00000620267 CNNM1Q9NRU3 951 aa12.14□□□□□ -0.47
PKD1L3-201ENST00000620267 AMOTL2Q9Y2J4 779 aa12.14□□□□□ -0.47
PKD1L3-201ENST00000620267 ITSN2Q9NZM3 1697 aa12.14□□□□□ -0.47
PKD1L3-201ENST00000620267 ZNF518AQ6AHZ1 1483 aa12.14□□□□□ -0.47
PKD1L3-201ENST00000620267 ZSCAN25Q6NSZ9 544 aa12.14□□□□□ -0.47
PKD1L3-201ENST00000620267 CADPS2Q86UW7 1296 aa12.14□□□□□ -0.47
PKD1L3-201ENST00000620267 CCDC43Q96MW1 224 aaKnown RBP12.14□□□□□ -0.47
PKD1L3-201ENST00000620267 BECN2A8MW95 431 aa12.14□□□□□ -0.47
PKD1L3-201ENST00000620267 NFE2L2Q16236 605 aa12.14□□□□□ -0.47
PKD1L3-201ENST00000620267 SMC3Q9UQE7 1217 aa12.14□□□□□ -0.47
PKD1L3-201ENST00000620267 ASXL2Q76L83 1435 aa12.14□□□□□ -0.47
PKD1L3-201ENST00000620267 GNAT3A8MTJ3 354 aa12.13□□□□□ -0.47
PKD1L3-201ENST00000620267 LNPKQ9C0E8 428 aa12.13□□□□□ -0.47
PKD1L3-201ENST00000620267 WASLO00401 505 aaPredicted RBP12.13□□□□□ -0.47
PKD1L3-201ENST00000620267 SLC4A2P04920 1241 aa12.13□□□□□ -0.47
PKD1L3-201ENST00000620267 ZNF652Q9Y2D9 606 aa12.13□□□□□ -0.47
PKD1L3-201ENST00000620267 KDM5BQ9UGL1 1544 aa12.13□□□□□ -0.47
PKD1L3-201ENST00000620267 MCM2P49736 904 aa12.13□□□□□ -0.47
PKD1L3-201ENST00000620267 FOXD4L1Q9NU39 408 aa12.13□□□□□ -0.47
PKD1L3-201ENST00000620267 PIP4K2BP78356 416 aa12.13□□□□□ -0.47
PKD1L3-201ENST00000620267 DUOX2Q9NRD8 1548 aa12.13□□□□□ -0.47
PKD1L3-201ENST00000620267 WDR7Q9Y4E6 1490 aa12.12□□□□□ -0.47
PKD1L3-201ENST00000620267 IDI1Q13907 227 aa12.12□□□□□ -0.47
PKD1L3-201ENST00000620267 GZF1Q9H116 711 aaPredicted RBP12.12□□□□□ -0.47
PKD1L3-201ENST00000620267 BTBD11A6QL63 1104 aa12.12□□□□□ -0.47
PKD1L3-201ENST00000620267 SCAF11Q99590 1463 aaKnown RBP12.12□□□□□ -0.47
PKD1L3-201ENST00000620267 DDX49Q9Y6V7 483 aaKnown RBP12.11□□□□□ -0.47
PKD1L3-201ENST00000620267 TTC39AQ5SRH9 613 aa12.11□□□□□ -0.47
PKD1L3-201ENST00000620267 PANK1Q8TE04 598 aa12.11□□□□□ -0.47
PKD1L3-201ENST00000620267 NACAP1Q9BZK3 213 aa12.11□□□□□ -0.47
PKD1L3-201ENST00000620267 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.11□□□□□ -0.47
PKD1L3-201ENST00000620267 TTC21BQ7Z4L5 1316 aa12.11□□□□□ -0.47
PKD1L3-201ENST00000620267 GPATCH8Q9UKJ3 1502 aaKnown RBP12.11□□□□□ -0.47
PKD1L3-201ENST00000620267 CCDC57Q2TAC2 916 aa12.11□□□□□ -0.47
PKD1L3-201ENST00000620267 CREBRFQ8IUR6 639 aa12.11□□□□□ -0.47
PKD1L3-201ENST00000620267 MPHOSPH8Q99549 860 aa12.11□□□□□ -0.47
PKD1L3-201ENST00000620267 CHMP5Q9NZZ3 219 aa12.11□□□□□ -0.47
PKD1L3-201ENST00000620267 C14orf93Q9H972 538 aaKnown RBP12.1□□□□□ -0.47
PKD1L3-201ENST00000620267 A2MP01023 1474 aa12.1□□□□□ -0.47
PKD1L3-201ENST00000620267 UGGT2Q9NYU1 1516 aa12.1□□□□□ -0.47
PKD1L3-201ENST00000620267 UHRF1BP1LA0JNW5 1464 aa12.09□□□□□ -0.47
PKD1L3-201ENST00000620267 PES1O00541 588 aaKnown RBP12.09□□□□□ -0.47
PKD1L3-201ENST00000620267 ZC3H6P61129 1189 aaKnown RBP12.09□□□□□ -0.47
PKD1L3-201ENST00000620267 ATP10BO94823 1461 aa12.09□□□□□ -0.47
PKD1L3-201ENST00000620267 IPO7O95373 1038 aaKnown RBP12.09□□□□□ -0.47
PKD1L3-201ENST00000620267 HSP90AB3PQ58FF7 597 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms