RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 NEO1Q92859 1461 aa16.69■□□□□ 0.26
SKP2-209ENST00000620197 FSD2A1L4K1 749 aa16.69■□□□□ 0.26
SKP2-209ENST00000620197 ZNF692Q9BU19 519 aaPredicted RBP16.68■□□□□ 0.26
SKP2-209ENST00000620197 ARHGEF40Q8TER5 1519 aa16.68■□□□□ 0.26
SKP2-209ENST00000620197 SMC5Q8IY18 1101 aa16.68■□□□□ 0.26
SKP2-209ENST00000620197 CANXP27824 592 aaKnown RBP16.67■□□□□ 0.26
SKP2-209ENST00000620197 ZKSCAN2Q63HK3 967 aa16.67■□□□□ 0.26
SKP2-209ENST00000620197 CFAP53Q96M91 514 aa16.67■□□□□ 0.26
SKP2-209ENST00000620197 DLG5Q8TDM6 1919 aa16.67■□□□□ 0.26
SKP2-209ENST00000620197 BRPF1P55201 1214 aaPredicted RBP16.67■□□□□ 0.26
SKP2-209ENST00000620197 TMEM132EQ6IEE7 984 aa16.67■□□□□ 0.26
SKP2-209ENST00000620197 PIK3R4Q99570 1358 aa16.66■□□□□ 0.26
SKP2-209ENST00000620197 DZIP1LQ8IYY4 767 aaKnown RBP16.66■□□□□ 0.26
SKP2-209ENST00000620197 TRIM27P14373 513 aa16.65■□□□□ 0.26
SKP2-209ENST00000620197 DLC1Q96QB1 1528 aa16.65■□□□□ 0.26
SKP2-209ENST00000620197 FAM135BQ49AJ0 1406 aa16.65■□□□□ 0.26
SKP2-209ENST00000620197 ALKQ9UM73 1620 aa16.64■□□□□ 0.25
SKP2-209ENST00000620197 MAP2P11137 1827 aaKnown RBP16.64■□□□□ 0.25
SKP2-209ENST00000620197 KNDC1Q76NI1 1749 aa16.64■□□□□ 0.25
SKP2-209ENST00000620197 YEATS2Q9ULM3 1422 aa16.64■□□□□ 0.25
SKP2-209ENST00000620197 TMPOP42166 694 aaKnown RBP16.64■□□□□ 0.25
SKP2-209ENST00000620197 BCL2L13Q9BXK5 485 aa16.64■□□□□ 0.25
SKP2-209ENST00000620197 ZBTB40Q9NUA8 1239 aa16.64■□□□□ 0.25
SKP2-209ENST00000620197 NEUROD2Q15784 382 aa16.63■□□□□ 0.25
SKP2-209ENST00000620197 TNNT2P45379 298 aaPredicted RBP16.62■□□□□ 0.25
SKP2-209ENST00000620197 PTCH1Q13635 1447 aa16.62■□□□□ 0.25
SKP2-209ENST00000620197 RBM25P49756 843 aaKnown RBP16.62■□□□□ 0.25
SKP2-209ENST00000620197 SSH1Q8WYL5 1049 aa16.62■□□□□ 0.25
SKP2-209ENST00000620197 MON2Q7Z3U7 1717 aa16.61■□□□□ 0.25
SKP2-209ENST00000620197 ATF7IPQ6VMQ6 1270 aa16.61■□□□□ 0.25
SKP2-209ENST00000620197 ATAD2Q6PL18 1390 aa16.61■□□□□ 0.25
SKP2-209ENST00000620197 YTHDC2Q9H6S0 1430 aaKnown RBP16.61■□□□□ 0.25
SKP2-209ENST00000620197 TSR2Q969E8 191 aaKnown RBP16.6■□□□□ 0.25
SKP2-209ENST00000620197 DDX19BQ9UMR2 479 aa16.6■□□□□ 0.25
SKP2-209ENST00000620197 VGFO15240 615 aaPredicted RBP16.6■□□□□ 0.25
SKP2-209ENST00000620197 EXOSC9Q06265 439 aaKnown RBP16.6■□□□□ 0.25
SKP2-209ENST00000620197 UBE2Q2Q8WVN8 375 aa16.6■□□□□ 0.25
SKP2-209ENST00000620197 NRKQ7Z2Y5 1582 aa16.59■□□□□ 0.25
SKP2-209ENST00000620197 SLKQ9H2G2 1235 aaPredicted RBP16.59■□□□□ 0.25
SKP2-209ENST00000620197 UPF2Q9HAU5 1272 aaKnown RBP16.59■□□□□ 0.25
SKP2-209ENST00000620197 AKAP12Q02952 1782 aa16.59■□□□□ 0.25
SKP2-209ENST00000620197 U2AF1L5P0DN76 240 aaPredicted RBP16.59■□□□□ 0.25
SKP2-209ENST00000620197 U2AF1Q01081 240 aaKnown RBP eCLIP16.59■□□□□ 0.25
SKP2-209ENST00000620197 NUCB1Q02818 461 aa16.59■□□□□ 0.25
SKP2-209ENST00000620197 ATP7BP35670 1465 aa16.59■□□□□ 0.25
SKP2-209ENST00000620197 FYB1O15117 783 aa16.58■□□□□ 0.25
SKP2-209ENST00000620197 MCM4P33991 863 aa16.58■□□□□ 0.25
SKP2-209ENST00000620197 ALDH1L2Q3SY69 923 aa16.58■□□□□ 0.25
SKP2-209ENST00000620197 C22orf23Q9BZE7 217 aa16.58■□□□□ 0.25
SKP2-209ENST00000620197 SNX21Q969T3 373 aa16.58■□□□□ 0.24
SKP2-209ENST00000620197 NRXN3Q9Y4C0 1643 aa16.58■□□□□ 0.24
SKP2-209ENST00000620197 CABP2Q9NPB3 220 aa16.58■□□□□ 0.24
SKP2-209ENST00000620197 L1TD1Q5T7N2 865 aaKnown RBP16.57■□□□□ 0.24
SKP2-209ENST00000620197 TUBGCP6Q96RT7 1819 aa16.56■□□□□ 0.24
SKP2-209ENST00000620197 C3P01024 1663 aa16.56■□□□□ 0.24
SKP2-209ENST00000620197 KIF2CQ99661 725 aa16.56■□□□□ 0.24
SKP2-209ENST00000620197 NOB1Q9ULX3 412 aaKnown RBP16.56■□□□□ 0.24
SKP2-209ENST00000620197 TMEM57Q8N5G2 664 aa16.55■□□□□ 0.24
SKP2-209ENST00000620197 KIF16BQ96L93 1317 aa16.55■□□□□ 0.24
SKP2-209ENST00000620197 XRCC6P12956 609 aaKnown RBP eCLIP16.55■□□□□ 0.24
SKP2-209ENST00000620197 RRAGDQ9NQL2 400 aaPredicted RBP16.55■□□□□ 0.24
SKP2-209ENST00000620197 SMC4Q9NTJ3 1288 aa16.55■□□□□ 0.24
SKP2-209ENST00000620197 CHMP5Q9NZZ3 219 aa16.54■□□□□ 0.24
SKP2-209ENST00000620197 FTSJ3Q8IY81 847 aaKnown RBP16.54■□□□□ 0.24
SKP2-209ENST00000620197 ZNF428Q96B54 188 aa16.54■□□□□ 0.24
SKP2-209ENST00000620197 RSPH6AQ9H0K4 717 aa16.53■□□□□ 0.24
SKP2-209ENST00000620197 CDK12Q9NYV4 1490 aaPredicted RBP16.53■□□□□ 0.24
SKP2-209ENST00000620197 IDI1Q13907 227 aa16.52■□□□□ 0.24
SKP2-209ENST00000620197 RGPD1P0DJD0 1748 aa16.52■□□□□ 0.23
SKP2-209ENST00000620197 SLC52A1Q9NWF4 448 aa16.51■□□□□ 0.23
SKP2-209ENST00000620197 CPSF1Q10570 1443 aaKnown RBP16.51■□□□□ 0.23
SKP2-209ENST00000620197 ARHGAP45Q92619 1136 aa16.51■□□□□ 0.23
SKP2-209ENST00000620197 CHGAP10645 457 aaKnown RBP16.51■□□□□ 0.23
SKP2-209ENST00000620197 BMP2KLQ5H9B9 411 aa16.51■□□□□ 0.23
SKP2-209ENST00000620197 SPATA31D1Q6ZQQ2 1576 aa16.5■□□□□ 0.23
SKP2-209ENST00000620197 GGT6Q6P531 493 aa16.5■□□□□ 0.23
SKP2-209ENST00000620197 FCHSD2O94868 740 aa16.5■□□□□ 0.23
SKP2-209ENST00000620197 ZNF853P0CG23 659 aa16.5■□□□□ 0.23
SKP2-209ENST00000620197 ABCC4O15439 1325 aa16.5■□□□□ 0.23
SKP2-209ENST00000620197 NALCNQ8IZF0 1738 aa16.5■□□□□ 0.23
SKP2-209ENST00000620197 ZBTB7BO15156 539 aaPredicted RBP16.5■□□□□ 0.23
SKP2-209ENST00000620197 GGNBP2Q9H3C7 697 aa16.5■□□□□ 0.23
SKP2-209ENST00000620197 ITPRIPQ8IWB1 547 aa16.49■□□□□ 0.23
SKP2-209ENST00000620197 CLEC17AQ6ZS10 378 aa16.48■□□□□ 0.23
SKP2-209ENST00000620197 RIPK4P57078 832 aa16.48■□□□□ 0.23
SKP2-209ENST00000620197 ITSN1Q15811 1721 aa16.48■□□□□ 0.23
SKP2-209ENST00000620197 KIF24Q5T7B8 1368 aa16.48■□□□□ 0.23
SKP2-209ENST00000620197 CHD1LQ86WJ1 897 aa16.48■□□□□ 0.23
SKP2-209ENST00000620197 TOPAZ1Q8N9V7 1692 aa16.48■□□□□ 0.23
SKP2-209ENST00000620197 ISY1Q9ULR0 285 aaKnown RBP16.48■□□□□ 0.23
SKP2-209ENST00000620197 MFAP1P55081 439 aaKnown RBP16.47■□□□□ 0.23
SKP2-209ENST00000620197 TERF2IPQ9NYB0 399 aa16.47■□□□□ 0.23
SKP2-209ENST00000620197 CIZ1Q9ULV3 898 aaPredicted RBP16.47■□□□□ 0.23
SKP2-209ENST00000620197 N4BP2Q86UW6 1770 aaPredicted RBP16.47■□□□□ 0.23
SKP2-209ENST00000620197 DIAPH1O60610 1272 aaKnown RBP16.47■□□□□ 0.23
SKP2-209ENST00000620197 MRPL50Q8N5N7 158 aaKnown RBP16.47■□□□□ 0.23
SKP2-209ENST00000620197 IPO8O15397 1037 aaKnown RBP16.46■□□□□ 0.23
SKP2-209ENST00000620197 AATKQ6ZMQ8 1374 aa16.46■□□□□ 0.23
SKP2-209ENST00000620197 TRAK2O60296 914 aa16.46■□□□□ 0.23
SKP2-209ENST00000620197 SIRT2Q8IXJ6 389 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms