RNA–Protein interactions for RNA: ENST00000619923.1

SLC46A1-209, Transcript of solute carrier family 46 member 1, humanhuman

Gene SLC46A1, Length 528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-209ENST00000619923 PEAK1Q9H792 1746 aa11.77□□□□□ -0.52
SLC46A1-209ENST00000619923 PARP4Q9UKK3 1724 aaKnown RBP11.77□□□□□ -0.52
SLC46A1-209ENST00000619923 ACIN1Q9UKV3 1341 aaKnown RBP11.77□□□□□ -0.53
SLC46A1-209ENST00000619923 RAB3GAP2Q9H2M9 1393 aa11.77□□□□□ -0.53
SLC46A1-209ENST00000619923 KRT27Q7Z3Y8 459 aa11.76□□□□□ -0.53
SLC46A1-209ENST00000619923 HIRIP3Q9BW71 556 aaPredicted RBP11.76□□□□□ -0.53
SLC46A1-209ENST00000619923 QRICH2Q9H0J4 1663 aa11.75□□□□□ -0.53
SLC46A1-209ENST00000619923 RGPD3A6NKT7 1758 aaPredicted RBP11.74□□□□□ -0.53
SLC46A1-209ENST00000619923 RGPD4Q7Z3J3 1758 aa11.74□□□□□ -0.53
SLC46A1-209ENST00000619923 PSDA5PKW4 1024 aaPredicted RBP11.74□□□□□ -0.53
SLC46A1-209ENST00000619923 FAM98CQ17RN3 349 aaKnown RBP11.74□□□□□ -0.53
SLC46A1-209ENST00000619923 FAM182BQ5T319 152 aa11.74□□□□□ -0.53
SLC46A1-209ENST00000619923 BTG4Q9NY30 223 aa11.74□□□□□ -0.53
SLC46A1-209ENST00000619923 SPATA31A5Q5VU36 1347 aa11.74□□□□□ -0.53
SLC46A1-209ENST00000619923 SPATA31A7Q8IWB4 1347 aa11.74□□□□□ -0.53
SLC46A1-209ENST00000619923 MINK1Q8N4C8 1332 aaPredicted RBP11.74□□□□□ -0.53
SLC46A1-209ENST00000619923 LRRC37A3O60309 1634 aa11.74□□□□□ -0.53
SLC46A1-209ENST00000619923 COL18A1P39060 1754 aa11.74□□□□□ -0.53
SLC46A1-209ENST00000619923 RGPD5Q99666 1765 aa11.74□□□□□ -0.53
SLC46A1-209ENST00000619923 PSME1Q06323 249 aa11.73□□□□□ -0.53
SLC46A1-209ENST00000619923 CAMTA1Q9Y6Y1 1673 aa11.73□□□□□ -0.53
SLC46A1-209ENST00000619923 PIK3C2AO00443 1686 aa11.72□□□□□ -0.53
SLC46A1-209ENST00000619923 HRCP23327 699 aa11.72□□□□□ -0.53
SLC46A1-209ENST00000619923 LMOD2Q6P5Q4 547 aa11.72□□□□□ -0.53
SLC46A1-209ENST00000619923 TRAK1Q9UPV9 953 aa11.72□□□□□ -0.53
SLC46A1-209ENST00000619923 CASZ1Q86V15 1759 aa11.72□□□□□ -0.53
SLC46A1-209ENST00000619923 KIAA0232Q92628 1395 aa11.71□□□□□ -0.53
SLC46A1-209ENST00000619923 GOLGB1Q14789 3259 aaKnown RBP11.71□□□□□ -0.53
SLC46A1-209ENST00000619923 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.53
SLC46A1-209ENST00000619923 CCDC9Q9Y3X0 531 aaKnown RBP11.71□□□□□ -0.53
SLC46A1-209ENST00000619923 AKAP12Q02952 1782 aa11.71□□□□□ -0.54
SLC46A1-209ENST00000619923 EIF3AQ14152 1382 aaKnown RBP11.7□□□□□ -0.54
SLC46A1-209ENST00000619923 WASLO00401 505 aaPredicted RBP11.7□□□□□ -0.54
SLC46A1-209ENST00000619923 POLR3AO14802 1390 aaPredicted RBP11.69□□□□□ -0.54
SLC46A1-209ENST00000619923 GPRASP1Q5JY77 1395 aa11.69□□□□□ -0.54
SLC46A1-209ENST00000619923 EN1Q05925 392 aaPredicted RBP11.69□□□□□ -0.54
SLC46A1-209ENST00000619923 POGKQ9P215 609 aa11.69□□□□□ -0.54
SLC46A1-209ENST00000619923 SSH2Q76I76 1423 aa11.69□□□□□ -0.54
SLC46A1-209ENST00000619923 SPATA31A1Q5TZJ5 1347 aa11.68□□□□□ -0.54
SLC46A1-209ENST00000619923 SLIT3O75094 1523 aa11.67□□□□□ -0.54
SLC46A1-209ENST00000619923 BAG6P46379 1132 aa11.67□□□□□ -0.54
SLC46A1-209ENST00000619923 SF3B2Q13435 895 aaKnown RBP11.67□□□□□ -0.54
SLC46A1-209ENST00000619923 COL5A2P05997 1499 aaPredicted RBP11.66□□□□□ -0.54
SLC46A1-209ENST00000619923 A0A0G2JS52 829 aa11.66□□□□□ -0.54
SLC46A1-209ENST00000619923 MYT1Q01538 1121 aa11.66□□□□□ -0.54
SLC46A1-209ENST00000619923 CHRNA2Q15822 529 aa11.66□□□□□ -0.54
SLC46A1-209ENST00000619923 USP19O94966 1318 aa11.65□□□□□ -0.54
SLC46A1-209ENST00000619923 TRPM1Q7Z4N2 1603 aa11.65□□□□□ -0.54
SLC46A1-209ENST00000619923 R3HDM1Q15032 1099 aaKnown RBP11.65□□□□□ -0.54
SLC46A1-209ENST00000619923 EZH2Q15910 746 aaKnown RBP11.65□□□□□ -0.54
SLC46A1-209ENST00000619923 DCAF11Q8TEB1 546 aa11.65□□□□□ -0.54
SLC46A1-209ENST00000619923 CAMKK2Q96RR4 588 aa11.65□□□□□ -0.54
SLC46A1-209ENST00000619923 PRDM11Q9NQV5 511 aa11.65□□□□□ -0.54
SLC46A1-209ENST00000619923 MON2Q7Z3U7 1717 aa11.64□□□□□ -0.55
SLC46A1-209ENST00000619923 NUDT16Q96DE0 195 aaKnown RBP11.64□□□□□ -0.55
SLC46A1-209ENST00000619923 KDM2AQ9Y2K7 1162 aa11.64□□□□□ -0.55
SLC46A1-209ENST00000619923 USP54Q70EL1 1684 aa11.64□□□□□ -0.55
SLC46A1-209ENST00000619923 CPDO75976 1380 aa11.64□□□□□ -0.55
SLC46A1-209ENST00000619923 MYOM1P52179 1685 aa11.63□□□□□ -0.55
SLC46A1-209ENST00000619923 NUTM2GQ5VZR2 741 aa11.63□□□□□ -0.55
SLC46A1-209ENST00000619923 ACEP12821 1306 aa11.62□□□□□ -0.55
SLC46A1-209ENST00000619923 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
SLC46A1-209ENST00000619923 TRIM37O94972 964 aa11.62□□□□□ -0.55
SLC46A1-209ENST00000619923 NGDNQ8NEJ9 315 aaKnown RBP11.62□□□□□ -0.55
SLC46A1-209ENST00000619923 ZC3H6P61129 1189 aaKnown RBP11.61□□□□□ -0.55
SLC46A1-209ENST00000619923 STRN4Q9NRL3 753 aa11.61□□□□□ -0.55
SLC46A1-209ENST00000619923 PARD3Q8TEW0 1356 aa11.61□□□□□ -0.55
SLC46A1-209ENST00000619923 LTN1O94822 1766 aa11.61□□□□□ -0.55
SLC46A1-209ENST00000619923 PPIP5K1Q6PFW1 1433 aa11.6□□□□□ -0.55
SLC46A1-209ENST00000619923 NFAT5O94916 1531 aa11.6□□□□□ -0.55
SLC46A1-209ENST00000619923 LARP1Q6PKG0 1096 aaKnown RBP11.6□□□□□ -0.55
SLC46A1-209ENST00000619923 CDK19Q9BWU1 502 aa11.6□□□□□ -0.55
SLC46A1-209ENST00000619923 PAPPAQ13219 1627 aa11.6□□□□□ -0.55
SLC46A1-209ENST00000619923 TUBGCP6Q96RT7 1819 aa11.59□□□□□ -0.55
SLC46A1-209ENST00000619923 PLEKHG3A1L390 1219 aa11.59□□□□□ -0.55
SLC46A1-209ENST00000619923 BARGINQ6ZT62 677 aa11.59□□□□□ -0.55
SLC46A1-209ENST00000619923 USP6P35125 1406 aa11.59□□□□□ -0.55
SLC46A1-209ENST00000619923 NHSQ6T4R5 1651 aa11.59□□□□□ -0.55
SLC46A1-209ENST00000619923 NBPF1Q3BBV0 1214 aa11.58□□□□□ -0.56
SLC46A1-209ENST00000619923 NBPF8Q3BBV2 869 aa11.58□□□□□ -0.56
SLC46A1-209ENST00000619923 USP35Q9P2H5 1018 aa11.58□□□□□ -0.56
SLC46A1-209ENST00000619923 CEP350Q5VT06 3117 aa11.57□□□□□ -0.56
SLC46A1-209ENST00000619923 FAM196AQ6ZSG2 479 aa11.57□□□□□ -0.56
SLC46A1-209ENST00000619923 CRB1P82279 1406 aa11.57□□□□□ -0.56
SLC46A1-209ENST00000619923 BTAF1O14981 1849 aa11.56□□□□□ -0.56
SLC46A1-209ENST00000619923 OVOS2A0A0G2JMS6 1433 aa11.56□□□□□ -0.56
SLC46A1-209ENST00000619923 OVOS2A0A0J9YW53 1432 aa11.56□□□□□ -0.56
SLC46A1-209ENST00000619923 OVOS2Q6IE36 1432 aa11.56□□□□□ -0.56
SLC46A1-209ENST00000619923 PTF1AQ7RTS3 328 aa11.56□□□□□ -0.56
SLC46A1-209ENST00000619923 COL24A1Q17RW2 1714 aa11.55□□□□□ -0.56
SLC46A1-209ENST00000619923 SHANK3Q9BYB0 1731 aa11.55□□□□□ -0.56
SLC46A1-209ENST00000619923 CHD4Q14839 1912 aa11.55□□□□□ -0.56
SLC46A1-209ENST00000619923 CPSF1Q10570 1443 aaKnown RBP11.55□□□□□ -0.56
SLC46A1-209ENST00000619923 APBA3O96018 575 aa11.55□□□□□ -0.56
SLC46A1-209ENST00000619923 CCDC61Q9Y6R9 512 aa11.55□□□□□ -0.56
SLC46A1-209ENST00000619923 TCP11L2Q8N4U5 519 aa11.54□□□□□ -0.56
SLC46A1-209ENST00000619923 STAC3Q96MF2 364 aa11.54□□□□□ -0.56
SLC46A1-209ENST00000619923 ANO8Q9HCE9 1232 aaPredicted RBP11.54□□□□□ -0.56
SLC46A1-209ENST00000619923 QSER1Q2KHR3 1735 aa11.54□□□□□ -0.56
SLC46A1-209ENST00000619923 ABCC6O95255 1503 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms