RNA–Protein interactions for RNA: ENST00000619408.1

TVP23A-211, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-211ENST00000619408 PROSER2Q86WR7 435 aaPredicted RBP10.21□□□□□ -0.77
TVP23A-211ENST00000619408 NRKQ7Z2Y5 1582 aa10.21□□□□□ -0.78
TVP23A-211ENST00000619408 STRCQ7RTU9 1775 aa10.21□□□□□ -0.78
TVP23A-211ENST00000619408 PLEKHG3A1L390 1219 aa10.2□□□□□ -0.78
TVP23A-211ENST00000619408 HNRNPUQ00839 825 aaKnown RBP eCLIP10.2□□□□□ -0.78
TVP23A-211ENST00000619408 PNISRQ8TF01 805 aaKnown RBP10.2□□□□□ -0.78
TVP23A-211ENST00000619408 USP6P35125 1406 aa10.19□□□□□ -0.78
TVP23A-211ENST00000619408 NCOA3Q9Y6Q9 1424 aa10.19□□□□□ -0.78
TVP23A-211ENST00000619408 ACEP12821 1306 aa10.19□□□□□ -0.78
TVP23A-211ENST00000619408 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.19□□□□□ -0.78
TVP23A-211ENST00000619408 GGNBP2Q9H3C7 697 aa10.19□□□□□ -0.78
TVP23A-211ENST00000619408 DCCP43146 1447 aa10.18□□□□□ -0.78
TVP23A-211ENST00000619408 POLR3AO14802 1390 aaPredicted RBP10.18□□□□□ -0.78
TVP23A-211ENST00000619408 INSRP06213 1382 aa10.18□□□□□ -0.78
TVP23A-211ENST00000619408 FYB1O15117 783 aa10.18□□□□□ -0.78
TVP23A-211ENST00000619408 TNNT2P45379 298 aaPredicted RBP10.18□□□□□ -0.78
TVP23A-211ENST00000619408 WDR43Q15061 677 aaKnown RBP eCLIP10.18□□□□□ -0.78
TVP23A-211ENST00000619408 NGDNQ8NEJ9 315 aaKnown RBP10.18□□□□□ -0.78
TVP23A-211ENST00000619408 CFAP53Q96M91 514 aa10.18□□□□□ -0.78
TVP23A-211ENST00000619408 TMEM94Q12767 1356 aa10.17□□□□□ -0.78
TVP23A-211ENST00000619408 STRCP1A6NGW2 1772 aa10.17□□□□□ -0.78
TVP23A-211ENST00000619408 RBM33Q96EV2 1170 aaKnown RBP10.17□□□□□ -0.78
TVP23A-211ENST00000619408 RGPD8O14715 1765 aaPredicted RBP10.16□□□□□ -0.78
TVP23A-211ENST00000619408 TTC21AQ8NDW8 1320 aa10.16□□□□□ -0.78
TVP23A-211ENST00000619408 PMFBP1Q8TBY8 1022 aa10.16□□□□□ -0.78
TVP23A-211ENST00000619408 COG3Q96JB2 828 aa10.16□□□□□ -0.78
TVP23A-211ENST00000619408 RBM19Q9Y4C8 960 aaKnown RBP10.16□□□□□ -0.78
TVP23A-211ENST00000619408 DMRT2Q9Y5R5 561 aa10.16□□□□□ -0.78
TVP23A-211ENST00000619408 KIF1AQ12756 1690 aa10.15□□□□□ -0.78
TVP23A-211ENST00000619408 MSH6P52701 1360 aa10.15□□□□□ -0.78
TVP23A-211ENST00000619408 TTC21BQ7Z4L5 1316 aa10.15□□□□□ -0.78
TVP23A-211ENST00000619408 ATF3P18847 181 aa10.15□□□□□ -0.78
TVP23A-211ENST00000619408 NME9Q86XW9 330 aa10.15□□□□□ -0.78
TVP23A-211ENST00000619408 C19orf44Q9H6X5 657 aa10.15□□□□□ -0.78
TVP23A-211ENST00000619408 PHF8Q9UPP1 1060 aa10.15□□□□□ -0.78
TVP23A-211ENST00000619408 BLMP54132 1417 aaPredicted RBP10.15□□□□□ -0.79
TVP23A-211ENST00000619408 ZBED9Q6R2W3 1325 aa10.14□□□□□ -0.79
TVP23A-211ENST00000619408 NEFLP07196 543 aa10.14□□□□□ -0.79
TVP23A-211ENST00000619408 MTHFSP49914 203 aa10.14□□□□□ -0.79
TVP23A-211ENST00000619408 GLIPR1L2Q4G1C9 344 aa10.14□□□□□ -0.79
TVP23A-211ENST00000619408 SSH2Q76I76 1423 aa10.14□□□□□ -0.79
TVP23A-211ENST00000619408 ESCO1Q5FWF5 840 aa10.13□□□□□ -0.79
TVP23A-211ENST00000619408 OVOS2A0A0J9YW53 1432 aa10.13□□□□□ -0.79
TVP23A-211ENST00000619408 OVOS2Q6IE36 1432 aa10.13□□□□□ -0.79
TVP23A-211ENST00000619408 AATKQ6ZMQ8 1374 aa10.13□□□□□ -0.79
TVP23A-211ENST00000619408 SHPRHQ149N8 1683 aa10.12□□□□□ -0.79
TVP23A-211ENST00000619408 ZNF335Q9H4Z2 1342 aaPredicted RBP10.12□□□□□ -0.79
TVP23A-211ENST00000619408 C1orf167Q5SNV9 1468 aa10.12□□□□□ -0.79
TVP23A-211ENST00000619408 CADPS2Q86UW7 1296 aa10.12□□□□□ -0.79
TVP23A-211ENST00000619408 MST1RQ04912 1400 aa10.12□□□□□ -0.79
TVP23A-211ENST00000619408 LRRC7Q96NW7 1537 aa10.12□□□□□ -0.79
TVP23A-211ENST00000619408 CDK12Q9NYV4 1490 aaPredicted RBP10.11□□□□□ -0.79
TVP23A-211ENST00000619408 SMG6Q86US8 1419 aaKnown RBP10.11□□□□□ -0.79
TVP23A-211ENST00000619408 PIK3C2AO00443 1686 aa10.11□□□□□ -0.79
TVP23A-211ENST00000619408 USP54Q70EL1 1684 aa10.1□□□□□ -0.79
TVP23A-211ENST00000619408 ADAMTS8Q9UP79 889 aa10.1□□□□□ -0.79
TVP23A-211ENST00000619408 NUDCQ9Y266 331 aa10.1□□□□□ -0.79
TVP23A-211ENST00000619408 USP31Q70CQ4 1352 aa10.1□□□□□ -0.79
TVP23A-211ENST00000619408 COL3A1P02461 1466 aaPredicted RBP10.1□□□□□ -0.79
TVP23A-211ENST00000619408 PPM1GO15355 546 aaPredicted RBP10.09□□□□□ -0.79
TVP23A-211ENST00000619408 PAK3O75914 559 aaPredicted RBP10.09□□□□□ -0.79
TVP23A-211ENST00000619408 DEKP35659 375 aaKnown RBP10.09□□□□□ -0.79
TVP23A-211ENST00000619408 PSME1Q06323 249 aa10.09□□□□□ -0.79
TVP23A-211ENST00000619408 ZRANB1Q9UGI0 708 aa10.09□□□□□ -0.79
TVP23A-211ENST00000619408 XIRP1Q702N8 1843 aaKnown RBP10.09□□□□□ -0.79
TVP23A-211ENST00000619408 ORAI2Q96SN7 254 aa10.08□□□□□ -0.8
TVP23A-211ENST00000619408 POLKQ9UBT6 870 aa10.08□□□□□ -0.8
TVP23A-211ENST00000619408 PNPLA6Q8IY17 1366 aa10.07□□□□□ -0.8
TVP23A-211ENST00000619408 DIAPH1O60610 1272 aaKnown RBP10.07□□□□□ -0.8
TVP23A-211ENST00000619408 NLRP6P59044 892 aa10.07□□□□□ -0.8
TVP23A-211ENST00000619408 ABTB2Q8N961 1025 aa10.07□□□□□ -0.8
TVP23A-211ENST00000619408 U2SURPO15042 1029 aaKnown RBP10.06□□□□□ -0.8
TVP23A-211ENST00000619408 FOXO3O43524 673 aa10.06□□□□□ -0.8
TVP23A-211ENST00000619408 U2AF1L5P0DN76 240 aaPredicted RBP10.06□□□□□ -0.8
TVP23A-211ENST00000619408 U2AF1Q01081 240 aaKnown RBP eCLIP10.06□□□□□ -0.8
TVP23A-211ENST00000619408 MAPK8IP2Q13387 824 aaPredicted RBP10.06□□□□□ -0.8
TVP23A-211ENST00000619408 EMILIN1Q9Y6C2 1016 aa10.06□□□□□ -0.8
TVP23A-211ENST00000619408 TRPM3Q9HCF6 1732 aaPredicted RBP10.06□□□□□ -0.8
TVP23A-211ENST00000619408 NPHP3Q7Z494 1330 aa10.06□□□□□ -0.8
TVP23A-211ENST00000619408 MAP2P11137 1827 aaKnown RBP10.05□□□□□ -0.8
TVP23A-211ENST00000619408 MARF1Q9Y4F3 1742 aaKnown RBP10.05□□□□□ -0.8
TVP23A-211ENST00000619408 RRS1Q15050 365 aaKnown RBP10.05□□□□□ -0.8
TVP23A-211ENST00000619408 CCDC146Q8IYE0 955 aa10.05□□□□□ -0.8
TVP23A-211ENST00000619408 NGEFQ8N5V2 710 aa10.05□□□□□ -0.8
TVP23A-211ENST00000619408 PNNQ9H307 717 aaKnown RBP10.05□□□□□ -0.8
TVP23A-211ENST00000619408 SBNO1A3KN83 1393 aa10.04□□□□□ -0.8
TVP23A-211ENST00000619408 FLT4P35916 1363 aa10.04□□□□□ -0.8
TVP23A-211ENST00000619408 KIF24Q5T7B8 1368 aa10.04□□□□□ -0.8
TVP23A-211ENST00000619408 SOX12O15370 315 aa10.04□□□□□ -0.8
TVP23A-211ENST00000619408 XPCQ01831 940 aaPredicted RBP10.04□□□□□ -0.8
TVP23A-211ENST00000619408 PDE3BQ13370 1112 aa10.04□□□□□ -0.8
TVP23A-211ENST00000619408 NUTM2GQ5VZR2 741 aa10.04□□□□□ -0.8
TVP23A-211ENST00000619408 KRT28Q7Z3Y7 464 aa10.04□□□□□ -0.8
TVP23A-211ENST00000619408 RUNDC1Q96C34 613 aa10.04□□□□□ -0.8
TVP23A-211ENST00000619408 MAPK8IP3Q9UPT6 1336 aa10.04□□□□□ -0.8
TVP23A-211ENST00000619408 IQSEC2Q5JU85 1478 aa10.04□□□□□ -0.8
TVP23A-211ENST00000619408 RTL1A6NKG5 1358 aa10.03□□□□□ -0.8
TVP23A-211ENST00000619408 SENP3-EIF4A1A0A087X0R7 540 aa10.03□□□□□ -0.8
TVP23A-211ENST00000619408 NEFMP07197 916 aa10.03□□□□□ -0.8
TVP23A-211ENST00000619408 FBLN1P23142 703 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms