RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 NEURL4Q96JN8 1562 aa5.75□□□□□ -1.49
SEC22B-202ENST00000618538 NOP58Q9Y2X3 529 aaKnown RBP5.75□□□□□ -1.49
SEC22B-202ENST00000618538 ADGRF5Q8IZF2 1346 aa5.75□□□□□ -1.49
SEC22B-202ENST00000618538 ARSIQ5FYB1 569 aa5.74□□□□□ -1.49
SEC22B-202ENST00000618538 CRBNQ96SW2 442 aa5.74□□□□□ -1.49
SEC22B-202ENST00000618538 ADGRL1O94910 1474 aa5.74□□□□□ -1.49
SEC22B-202ENST00000618538 MYOM2P54296 1465 aa5.74□□□□□ -1.49
SEC22B-202ENST00000618538 FRMPD1Q5SYB0 1578 aa5.74□□□□□ -1.49
SEC22B-202ENST00000618538 BCL11AQ9H165 835 aa5.74□□□□□ -1.49
SEC22B-202ENST00000618538 NRXN1Q9ULB1 1477 aa5.74□□□□□ -1.49
SEC22B-202ENST00000618538 KDM5AP29375 1690 aaKnown RBP5.74□□□□□ -1.49
SEC22B-202ENST00000618538 MYO3AQ8NEV4 1616 aa5.73□□□□□ -1.49
SEC22B-202ENST00000618538 PIK3C2GO75747 1445 aa5.73□□□□□ -1.49
SEC22B-202ENST00000618538 CFAP70Q5T0N1 1121 aa5.73□□□□□ -1.49
SEC22B-202ENST00000618538 DUSP27Q5VZP5 1158 aa5.73□□□□□ -1.49
SEC22B-202ENST00000618538 CARD14Q9BXL6 1004 aa5.73□□□□□ -1.49
SEC22B-202ENST00000618538 ADGRB3O60242 1522 aa5.73□□□□□ -1.49
SEC22B-202ENST00000618538 KIF3BO15066 747 aa5.72□□□□□ -1.49
SEC22B-202ENST00000618538 ASXL2Q76L83 1435 aa5.72□□□□□ -1.49
SEC22B-202ENST00000618538 ERICH6Q7L0X2 663 aa5.72□□□□□ -1.49
SEC22B-202ENST00000618538 IPO9Q96P70 1041 aaKnown RBP5.72□□□□□ -1.49
SEC22B-202ENST00000618538 ZC3H13Q5T200 1668 aaKnown RBP5.72□□□□□ -1.49
SEC22B-202ENST00000618538 KDM2BQ8NHM5 1336 aa5.72□□□□□ -1.49
SEC22B-202ENST00000618538 NPC1L1Q9UHC9 1359 aa5.72□□□□□ -1.49
SEC22B-202ENST00000618538 LMTK2Q8IWU2 1503 aa5.72□□□□□ -1.49
SEC22B-202ENST00000618538 SHPRHQ149N8 1683 aa5.71□□□□□ -1.49
SEC22B-202ENST00000618538 PDE4AP27815 886 aa5.71□□□□□ -1.49
SEC22B-202ENST00000618538 KNSTRNQ9Y448 316 aa5.71□□□□□ -1.49
SEC22B-202ENST00000618538 ADGRB1O14514 1584 aa5.71□□□□□ -1.5
SEC22B-202ENST00000618538 KIF1BO60333 1816 aa5.71□□□□□ -1.5
SEC22B-202ENST00000618538 ADGRD1Q6QNK2 874 aa5.71□□□□□ -1.5
SEC22B-202ENST00000618538 TMEM92Q6UXU6 159 aa5.71□□□□□ -1.5
SEC22B-202ENST00000618538 CCDC146Q8IYE0 955 aa5.71□□□□□ -1.5
SEC22B-202ENST00000618538 BACH2Q9BYV9 841 aa5.71□□□□□ -1.5
SEC22B-202ENST00000618538 NOS1P29475 1434 aa5.71□□□□□ -1.5
SEC22B-202ENST00000618538 SIGLEC1Q9BZZ2 1709 aa5.71□□□□□ -1.5
SEC22B-202ENST00000618538 ARHGAP33O14559 1287 aa5.7□□□□□ -1.5
SEC22B-202ENST00000618538 TCERG1O14776 1098 aaKnown RBP5.7□□□□□ -1.5
SEC22B-202ENST00000618538 NBR1Q14596 966 aa5.7□□□□□ -1.5
SEC22B-202ENST00000618538 TRMT2AQ8IZ69 625 aaKnown RBP5.7□□□□□ -1.5
SEC22B-202ENST00000618538 NPATQ14207 1427 aa5.7□□□□□ -1.5
SEC22B-202ENST00000618538 PPLO60437 1756 aa5.7□□□□□ -1.5
SEC22B-202ENST00000618538 KANK1Q14678 1352 aa5.7□□□□□ -1.5
SEC22B-202ENST00000618538 SLC34A2O95436 690 aa5.7□□□□□ -1.5
SEC22B-202ENST00000618538 SLFN5Q08AF3 891 aa5.7□□□□□ -1.5
SEC22B-202ENST00000618538 HECW2Q9P2P5 1572 aa5.69□□□□□ -1.5
SEC22B-202ENST00000618538 SETBP1Q9Y6X0 1596 aa5.69□□□□□ -1.5
SEC22B-202ENST00000618538 ZNF518AQ6AHZ1 1483 aa5.69□□□□□ -1.5
SEC22B-202ENST00000618538 EIF3AQ14152 1382 aaKnown RBP5.69□□□□□ -1.5
SEC22B-202ENST00000618538 ANP32AP39687 249 aaKnown RBP5.69□□□□□ -1.5
SEC22B-202ENST00000618538 NPM2Q86SE8 214 aaKnown RBP5.69□□□□□ -1.5
SEC22B-202ENST00000618538 QRICH2Q9H0J4 1663 aa5.69□□□□□ -1.5
SEC22B-202ENST00000618538 POGZQ7Z3K3 1410 aa5.69□□□□□ -1.5
SEC22B-202ENST00000618538 SBNO2Q9Y2G9 1366 aa5.69□□□□□ -1.5
SEC22B-202ENST00000618538 APAF1O14727 1248 aa5.68□□□□□ -1.5
SEC22B-202ENST00000618538 WDR43Q15061 677 aaKnown RBP eCLIP5.68□□□□□ -1.5
SEC22B-202ENST00000618538 EFCAB3Q8N7B9 438 aa5.68□□□□□ -1.5
SEC22B-202ENST00000618538 IQSEC2Q5JU85 1478 aa5.68□□□□□ -1.5
SEC22B-202ENST00000618538 MS4A1P11836 297 aa5.68□□□□□ -1.5
SEC22B-202ENST00000618538 DEKP35659 375 aaKnown RBP5.68□□□□□ -1.5
SEC22B-202ENST00000618538 STAC3Q96MF2 364 aa5.68□□□□□ -1.5
SEC22B-202ENST00000618538 CFAP65Q6ZU64 1925 aaKnown RBP5.68□□□□□ -1.5
SEC22B-202ENST00000618538 ABCC3O15438 1527 aa5.68□□□□□ -1.5
SEC22B-202ENST00000618538 TULP4Q9NRJ4 1543 aa5.68□□□□□ -1.5
SEC22B-202ENST00000618538 BCAR3O75815 825 aa5.67□□□□□ -1.5
SEC22B-202ENST00000618538 CDCA8Q53HL2 280 aa5.67□□□□□ -1.5
SEC22B-202ENST00000618538 NKTRP30414 1462 aaKnown RBP5.67□□□□□ -1.5
SEC22B-202ENST00000618538 NSD3Q9BZ95 1437 aa5.67□□□□□ -1.5
SEC22B-202ENST00000618538 PIK3C2BO00750 1634 aa5.67□□□□□ -1.5
SEC22B-202ENST00000618538 VASPP50552 380 aaPredicted RBP5.67□□□□□ -1.5
SEC22B-202ENST00000618538 CAMSAP1Q5T5Y3 1602 aa5.67□□□□□ -1.5
SEC22B-202ENST00000618538 GLI2P10070 1586 aa5.66□□□□□ -1.5
SEC22B-202ENST00000618538 ARHGEF28Q8N1W1 1705 aaKnown RBP5.66□□□□□ -1.5
SEC22B-202ENST00000618538 MLH3Q9UHC1 1453 aa5.66□□□□□ -1.5
SEC22B-202ENST00000618538 A0A0G2JS52 829 aa5.66□□□□□ -1.5
SEC22B-202ENST00000618538 TMEM132EQ6IEE7 984 aa5.66□□□□□ -1.5
SEC22B-202ENST00000618538 USP32Q8NFA0 1604 aa5.66□□□□□ -1.5
SEC22B-202ENST00000618538 POLR3AO14802 1390 aaPredicted RBP5.66□□□□□ -1.5
SEC22B-202ENST00000618538 NEXMIFQ5QGS0 1516 aa5.66□□□□□ -1.5
SEC22B-202ENST00000618538 CENPJQ9HC77 1338 aaPredicted RBP5.66□□□□□ -1.5
SEC22B-202ENST00000618538 HRO43593 1189 aa5.66□□□□□ -1.5
SEC22B-202ENST00000618538 C8orf34Q49A92 452 aa5.66□□□□□ -1.5
SEC22B-202ENST00000618538 SPOCK2Q92563 424 aa5.66□□□□□ -1.5
SEC22B-202ENST00000618538 SLC12A5Q9H2X9 1139 aa5.66□□□□□ -1.5
SEC22B-202ENST00000618538 TRAK1Q9UPV9 953 aa5.66□□□□□ -1.5
SEC22B-202ENST00000618538 C14orf93Q9H972 538 aaKnown RBP5.65□□□□□ -1.5
SEC22B-202ENST00000618538 TNNQ9UQP3 1299 aa5.65□□□□□ -1.5
SEC22B-202ENST00000618538 DIP2CQ9Y2E4 1556 aa5.65□□□□□ -1.5
SEC22B-202ENST00000618538 LAS1LQ9Y4W2 734 aaKnown RBP5.65□□□□□ -1.5
SEC22B-202ENST00000618538 CD109Q6YHK3 1445 aa5.64□□□□□ -1.51
SEC22B-202ENST00000618538 IGHDP01880 384 aa5.64□□□□□ -1.51
SEC22B-202ENST00000618538 NUTM2DQ5VT03 806 aaPredicted RBP5.64□□□□□ -1.51
SEC22B-202ENST00000618538 CENPQQ7L2Z9 268 aaPredicted RBP5.64□□□□□ -1.51
SEC22B-202ENST00000618538 CHGAP10645 457 aaKnown RBP5.64□□□□□ -1.51
SEC22B-202ENST00000618538 TNNT2P45379 298 aaPredicted RBP5.64□□□□□ -1.51
SEC22B-202ENST00000618538 LAPTM4AQ15012 233 aa5.64□□□□□ -1.51
SEC22B-202ENST00000618538 GGT6Q6P531 493 aa5.64□□□□□ -1.51
SEC22B-202ENST00000618538 WWC1Q8IX03 1113 aa5.64□□□□□ -1.51
SEC22B-202ENST00000618538 RRP7AQ9Y3A4 280 aaKnown RBP5.64□□□□□ -1.51
SEC22B-202ENST00000618538 CFAP74Q9C0B2 1584 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms