RNA–Protein interactions for RNA: ENST00000618515.4

KIF3A-208, Transcript of kinesin family member 3A, humanhuman

TSL 5 BASIC

Gene KIF3A, Length 3,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-208ENST00000618515 DZIP1LQ8IYY4 767 aaKnown RBP16.52■□□□□ 0.24
KIF3A-208ENST00000618515 SKOR2Q2VWA4 1001 aaPredicted RBP16.52■□□□□ 0.23
KIF3A-208ENST00000618515 DDX19BQ9UMR2 479 aa16.52■□□□□ 0.23
KIF3A-208ENST00000618515 C14orf93Q9H972 538 aaKnown RBP16.51■□□□□ 0.23
KIF3A-208ENST00000618515 UGGT1Q9NYU2 1555 aa16.51■□□□□ 0.23
KIF3A-208ENST00000618515 PPIP5K1Q6PFW1 1433 aa16.51■□□□□ 0.23
KIF3A-208ENST00000618515 RRP9O43818 475 aaKnown RBP16.5■□□□□ 0.23
KIF3A-208ENST00000618515 GLI2P10070 1586 aa16.5■□□□□ 0.23
KIF3A-208ENST00000618515 KIF13AQ9H1H9 1805 aa16.5■□□□□ 0.23
KIF3A-208ENST00000618515 EIF5BO60841 1220 aaKnown RBP16.49■□□□□ 0.23
KIF3A-208ENST00000618515 TULP4Q9NRJ4 1543 aa16.49■□□□□ 0.23
KIF3A-208ENST00000618515 ZNF428Q96B54 188 aa16.48■□□□□ 0.23
KIF3A-208ENST00000618515 GLIPR1L2Q4G1C9 344 aa16.48■□□□□ 0.23
KIF3A-208ENST00000618515 PNNQ9H307 717 aaKnown RBP16.48■□□□□ 0.23
KIF3A-208ENST00000618515 HECW2Q9P2P5 1572 aa16.48■□□□□ 0.23
KIF3A-208ENST00000618515 HSCBQ8IWL3 235 aa16.47■□□□□ 0.23
KIF3A-208ENST00000618515 GRPEL1Q9HAV7 217 aa16.47■□□□□ 0.23
KIF3A-208ENST00000618515 PIK3R4Q99570 1358 aa16.47■□□□□ 0.23
KIF3A-208ENST00000618515 PLEKHF1Q96S99 279 aa16.47■□□□□ 0.23
KIF3A-208ENST00000618515 NUCB1Q02818 461 aa16.46■□□□□ 0.23
KIF3A-208ENST00000618515 RAB3GAP1Q15042 981 aa16.46■□□□□ 0.23
KIF3A-208ENST00000618515 ALDH1L2Q3SY69 923 aa16.46■□□□□ 0.23
KIF3A-208ENST00000618515 FRMPD1Q5SYB0 1578 aa16.46■□□□□ 0.22
KIF3A-208ENST00000618515 ZFYVE9O95405 1425 aa16.45■□□□□ 0.22
KIF3A-208ENST00000618515 YEATS2Q9ULM3 1422 aa16.45■□□□□ 0.22
KIF3A-208ENST00000618515 ZBTB40Q9NUA8 1239 aa16.45■□□□□ 0.22
KIF3A-208ENST00000618515 CAMSAP1Q5T5Y3 1602 aa16.45■□□□□ 0.22
KIF3A-208ENST00000618515 ATF7IPQ6VMQ6 1270 aa16.44■□□□□ 0.22
KIF3A-208ENST00000618515 TERF1P54274 439 aa16.44■□□□□ 0.22
KIF3A-208ENST00000618515 TNNQ9UQP3 1299 aa16.44■□□□□ 0.22
KIF3A-208ENST00000618515 ABCC3O15438 1527 aa16.44■□□□□ 0.22
KIF3A-208ENST00000618515 MTHFSP49914 203 aa16.44■□□□□ 0.22
KIF3A-208ENST00000618515 BMP2KLQ5H9B9 411 aa16.43■□□□□ 0.22
KIF3A-208ENST00000618515 CHMP4BQ9H444 224 aaKnown RBP16.43■□□□□ 0.22
KIF3A-208ENST00000618515 PNPLA6Q8IY17 1366 aa16.43■□□□□ 0.22
KIF3A-208ENST00000618515 GBP4Q96PP9 640 aa16.43■□□□□ 0.22
KIF3A-208ENST00000618515 TRIM27P14373 513 aa16.42■□□□□ 0.22
KIF3A-208ENST00000618515 PPP1R9BQ96SB3 815 aa16.42■□□□□ 0.22
KIF3A-208ENST00000618515 NEXMIFQ5QGS0 1516 aa16.42■□□□□ 0.22
KIF3A-208ENST00000618515 ESPNB1AK53 854 aa16.42■□□□□ 0.22
KIF3A-208ENST00000618515 TPM2P07951 284 aa16.42■□□□□ 0.22
KIF3A-208ENST00000618515 FTSJ3Q8IY81 847 aaKnown RBP16.42■□□□□ 0.22
KIF3A-208ENST00000618515 MLECQ14165 292 aa16.41■□□□□ 0.22
KIF3A-208ENST00000618515 CFAP44Q96MT7 982 aa16.41■□□□□ 0.22
KIF3A-208ENST00000618515 KIF20BQ96Q89 1820 aa16.41■□□□□ 0.22
KIF3A-208ENST00000618515 IPO8O15397 1037 aaKnown RBP16.41■□□□□ 0.22
KIF3A-208ENST00000618515 PANK2Q9BZ23 570 aa16.4■□□□□ 0.22
KIF3A-208ENST00000618515 PTCH1Q13635 1447 aa16.4■□□□□ 0.22
KIF3A-208ENST00000618515 KIF24Q5T7B8 1368 aa16.4■□□□□ 0.22
KIF3A-208ENST00000618515 TRIM35Q9UPQ4 493 aa16.4■□□□□ 0.22
KIF3A-208ENST00000618515 EVC2Q86UK5 1308 aa16.39■□□□□ 0.21
KIF3A-208ENST00000618515 ARHGAP45Q92619 1136 aa16.39■□□□□ 0.21
KIF3A-208ENST00000618515 HS1BP3Q53T59 392 aa16.39■□□□□ 0.21
KIF3A-208ENST00000618515 PLPPR3Q6T4P5 718 aa16.39■□□□□ 0.21
KIF3A-208ENST00000618515 GCC1Q96CN9 775 aa16.39■□□□□ 0.21
KIF3A-208ENST00000618515 HSP90AA1P07900 732 aaKnown RBP16.38■□□□□ 0.21
KIF3A-208ENST00000618515 KIF2CQ99661 725 aa16.38■□□□□ 0.21
KIF3A-208ENST00000618515 SLC12A5Q9H2X9 1139 aa16.38■□□□□ 0.21
KIF3A-208ENST00000618515 MLH3Q9UHC1 1453 aa16.38■□□□□ 0.21
KIF3A-208ENST00000618515 NPATQ14207 1427 aa16.38■□□□□ 0.21
KIF3A-208ENST00000618515 TMPOP42166 694 aaKnown RBP16.38■□□□□ 0.21
KIF3A-208ENST00000618515 MFAP1P55081 439 aaKnown RBP16.38■□□□□ 0.21
KIF3A-208ENST00000618515 TNPO1Q92973 898 aaKnown RBP16.38■□□□□ 0.21
KIF3A-208ENST00000618515 RRP7AQ9Y3A4 280 aaKnown RBP16.37■□□□□ 0.21
KIF3A-208ENST00000618515 CCDC173Q0VFZ6 552 aa16.37■□□□□ 0.21
KIF3A-208ENST00000618515 SSH1Q8WYL5 1049 aa16.37■□□□□ 0.21
KIF3A-208ENST00000618515 NEO1Q92859 1461 aa16.36■□□□□ 0.21
KIF3A-208ENST00000618515 KIF3BO15066 747 aa16.36■□□□□ 0.21
KIF3A-208ENST00000618515 SMC4Q9NTJ3 1288 aa16.36■□□□□ 0.21
KIF3A-208ENST00000618515 CHD1LQ86WJ1 897 aa16.35■□□□□ 0.21
KIF3A-208ENST00000618515 EXOSC9Q06265 439 aaKnown RBP16.35■□□□□ 0.21
KIF3A-208ENST00000618515 SIGLEC1Q9BZZ2 1709 aa16.34■□□□□ 0.21
KIF3A-208ENST00000618515 GGT6Q6P531 493 aa16.33■□□□□ 0.2
KIF3A-208ENST00000618515 NAP1L5Q96NT1 182 aaPredicted RBP16.33■□□□□ 0.2
KIF3A-208ENST00000618515 CD163L1Q9NR16 1453 aa16.33■□□□□ 0.2
KIF3A-208ENST00000618515 HSP90AA2PQ14568 343 aaPredicted RBP16.33■□□□□ 0.2
KIF3A-208ENST00000618515 KLHL40Q2TBA0 621 aa16.33■□□□□ 0.2
KIF3A-208ENST00000618515 NOB1Q9ULX3 412 aaKnown RBP16.33■□□□□ 0.2
KIF3A-208ENST00000618515 ERBB4Q15303 1308 aa16.32■□□□□ 0.2
KIF3A-208ENST00000618515 K7ELQ4 463 aaPredicted RBP16.32■□□□□ 0.2
KIF3A-208ENST00000618515 ZNF445P59923 1031 aa16.32■□□□□ 0.2
KIF3A-208ENST00000618515 NEUROD2Q15784 382 aa16.32■□□□□ 0.2
KIF3A-208ENST00000618515 TMEM57Q8N5G2 664 aa16.32■□□□□ 0.2
KIF3A-208ENST00000618515 BCL2L13Q9BXK5 485 aa16.32■□□□□ 0.2
KIF3A-208ENST00000618515 FAM135BQ49AJ0 1406 aa16.32■□□□□ 0.2
KIF3A-208ENST00000618515 ATAD2Q6PL18 1390 aa16.32■□□□□ 0.2
KIF3A-208ENST00000618515 U2AF1L5P0DN76 240 aaPredicted RBP16.32■□□□□ 0.2
KIF3A-208ENST00000618515 U2AF1Q01081 240 aaKnown RBP eCLIP16.32■□□□□ 0.2
KIF3A-208ENST00000618515 POGZQ7Z3K3 1410 aa16.32■□□□□ 0.2
KIF3A-208ENST00000618515 ITPRIPQ8IWB1 547 aa16.31■□□□□ 0.2
KIF3A-208ENST00000618515 GAS2L3Q86XJ1 694 aa16.3■□□□□ 0.2
KIF3A-208ENST00000618515 LRRC7Q96NW7 1537 aa16.3■□□□□ 0.2
KIF3A-208ENST00000618515 A0A1W2PP64 1363 aa16.3■□□□□ 0.2
KIF3A-208ENST00000618515 PTPRMP28827 1452 aa16.29■□□□□ 0.2
KIF3A-208ENST00000618515 GZF1Q9H116 711 aaPredicted RBP16.29■□□□□ 0.2
KIF3A-208ENST00000618515 ZBTB7BO15156 539 aaPredicted RBP16.29■□□□□ 0.2
KIF3A-208ENST00000618515 TRIM44Q96DX7 344 aaPredicted RBP16.29■□□□□ 0.2
KIF3A-208ENST00000618515 CYP2E1P05181 493 aaPredicted RBP16.29■□□□□ 0.2
KIF3A-208ENST00000618515 HSP90AB1P08238 724 aaKnown RBP16.28■□□□□ 0.2
KIF3A-208ENST00000618515 TRAK1Q9UPV9 953 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms