RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 PLEKHG3A1L390 1219 aa16.63■□□□□ 0.25
SHANK2-221ENST00000618363 TRPM1Q7Z4N2 1603 aa16.63■□□□□ 0.25
SHANK2-221ENST00000618363 RGS12O14924 1447 aa16.62■□□□□ 0.25
SHANK2-221ENST00000618363 UPF1Q92900 1129 aaKnown RBP eCLIP16.62■□□□□ 0.25
SHANK2-221ENST00000618363 CARD11Q9BXL7 1154 aa16.62■□□□□ 0.25
SHANK2-221ENST00000618363 QRICH2Q9H0J4 1663 aa16.62■□□□□ 0.25
SHANK2-221ENST00000618363 PPIP5K1Q6PFW1 1433 aa16.61■□□□□ 0.25
SHANK2-221ENST00000618363 TRPM3Q9HCF6 1732 aaPredicted RBP16.6■□□□□ 0.25
SHANK2-221ENST00000618363 FAM83GA6ND36 823 aa16.6■□□□□ 0.25
SHANK2-221ENST00000618363 ABTB2Q8N961 1025 aa16.6■□□□□ 0.25
SHANK2-221ENST00000618363 POLR3AO14802 1390 aaPredicted RBP16.6■□□□□ 0.25
SHANK2-221ENST00000618363 SLIT2O94813 1529 aa16.6■□□□□ 0.25
SHANK2-221ENST00000618363 PRDM11Q9NQV5 511 aa16.59■□□□□ 0.25
SHANK2-221ENST00000618363 ATAD2Q6PL18 1390 aa16.59■□□□□ 0.25
SHANK2-221ENST00000618363 VPS72Q15906 364 aa16.58■□□□□ 0.24
SHANK2-221ENST00000618363 NUTM2GQ5VZR2 741 aa16.58■□□□□ 0.24
SHANK2-221ENST00000618363 BTG4Q9NY30 223 aa16.58■□□□□ 0.24
SHANK2-221ENST00000618363 CABP1Q9NZU7 370 aa16.58■□□□□ 0.24
SHANK2-221ENST00000618363 ALS2Q96Q42 1657 aa16.58■□□□□ 0.24
SHANK2-221ENST00000618363 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.57■□□□□ 0.24
SHANK2-221ENST00000618363 A0A0G2JS52 829 aa16.57■□□□□ 0.24
SHANK2-221ENST00000618363 MYT1Q01538 1121 aa16.57■□□□□ 0.24
SHANK2-221ENST00000618363 NLRP13Q86W25 1043 aa16.57■□□□□ 0.24
SHANK2-221ENST00000618363 TOPAZ1Q8N9V7 1692 aa16.56■□□□□ 0.24
SHANK2-221ENST00000618363 BRD4O60885 1362 aaPredicted RBP16.55■□□□□ 0.24
SHANK2-221ENST00000618363 ABCA3Q99758 1704 aa16.55■□□□□ 0.24
SHANK2-221ENST00000618363 NWD2Q9ULI1 1742 aa16.55■□□□□ 0.24
SHANK2-221ENST00000618363 RALGAPBQ86X10 1494 aa16.54■□□□□ 0.24
SHANK2-221ENST00000618363 ZC3H6P61129 1189 aaKnown RBP16.54■□□□□ 0.24
SHANK2-221ENST00000618363 ZNF692Q9BU19 519 aaPredicted RBP16.54■□□□□ 0.24
SHANK2-221ENST00000618363 PCGF6Q9BYE7 350 aa16.54■□□□□ 0.24
SHANK2-221ENST00000618363 PLCH1Q4KWH8 1693 aa16.53■□□□□ 0.24
SHANK2-221ENST00000618363 EVA1CP58658 441 aa16.53■□□□□ 0.24
SHANK2-221ENST00000618363 COL14A1Q05707 1796 aaKnown RBP16.53■□□□□ 0.24
SHANK2-221ENST00000618363 SLC24A1O60721 1099 aa16.52■□□□□ 0.24
SHANK2-221ENST00000618363 SEPT12Q8IYM1 358 aa16.52■□□□□ 0.24
SHANK2-221ENST00000618363 KIAA0232Q92628 1395 aa16.51■□□□□ 0.23
SHANK2-221ENST00000618363 NLRP6P59044 892 aa16.51■□□□□ 0.23
SHANK2-221ENST00000618363 CHRNA2Q15822 529 aa16.51■□□□□ 0.23
SHANK2-221ENST00000618363 CCDC125Q86Z20 511 aa16.5■□□□□ 0.23
SHANK2-221ENST00000618363 TMC1Q8TDI8 760 aa16.5■□□□□ 0.23
SHANK2-221ENST00000618363 STRN4Q9NRL3 753 aa16.5■□□□□ 0.23
SHANK2-221ENST00000618363 ZBTB7CA1YPR0 619 aa16.49■□□□□ 0.23
SHANK2-221ENST00000618363 GLI3P10071 1580 aa16.49■□□□□ 0.23
SHANK2-221ENST00000618363 USP6P35125 1406 aa16.49■□□□□ 0.23
SHANK2-221ENST00000618363 SBNO2Q9Y2G9 1366 aa16.49■□□□□ 0.23
SHANK2-221ENST00000618363 GCP02774 474 aa16.48■□□□□ 0.23
SHANK2-221ENST00000618363 SF3B2Q13435 895 aaKnown RBP16.48■□□□□ 0.23
SHANK2-221ENST00000618363 FAM98CQ17RN3 349 aaKnown RBP16.48■□□□□ 0.23
SHANK2-221ENST00000618363 ONECUT3O60422 494 aaPredicted RBP16.47■□□□□ 0.23
SHANK2-221ENST00000618363 KRT27Q7Z3Y8 459 aa16.47■□□□□ 0.23
SHANK2-221ENST00000618363 HDGFL2Q7Z4V5 671 aaPredicted RBP16.47■□□□□ 0.23
SHANK2-221ENST00000618363 PHRF1Q9P1Y6 1649 aaKnown RBP16.46■□□□□ 0.23
SHANK2-221ENST00000618363 TIMELESSQ9UNS1 1208 aa16.46■□□□□ 0.23
SHANK2-221ENST00000618363 KTN1Q86UP2 1357 aaKnown RBP16.46■□□□□ 0.23
SHANK2-221ENST00000618363 USP19O94966 1318 aa16.45■□□□□ 0.22
SHANK2-221ENST00000618363 SPATA31A5Q5VU36 1347 aa16.45■□□□□ 0.22
SHANK2-221ENST00000618363 SPATA31A7Q8IWB4 1347 aa16.45■□□□□ 0.22
SHANK2-221ENST00000618363 TTC21AQ8NDW8 1320 aa16.45■□□□□ 0.22
SHANK2-221ENST00000618363 CLSPNQ9HAW4 1339 aa16.45■□□□□ 0.22
SHANK2-221ENST00000618363 CRYBG1Q9Y4K1 1723 aa16.45■□□□□ 0.22
SHANK2-221ENST00000618363 TTC21BQ7Z4L5 1316 aa16.45■□□□□ 0.22
SHANK2-221ENST00000618363 CPDO75976 1380 aa16.44■□□□□ 0.22
SHANK2-221ENST00000618363 KCNH5Q8NCM2 988 aa16.44■□□□□ 0.22
SHANK2-221ENST00000618363 TERF2IPQ9NYB0 399 aa16.44■□□□□ 0.22
SHANK2-221ENST00000618363 USP35Q9P2H5 1018 aa16.44■□□□□ 0.22
SHANK2-221ENST00000618363 NRAPQ86VF7 1730 aa16.44■□□□□ 0.22
SHANK2-221ENST00000618363 ST20-MTHFSA0A0A6YYL1 179 aa16.43■□□□□ 0.22
SHANK2-221ENST00000618363 PUS7Q96PZ0 661 aaKnown RBP16.43■□□□□ 0.22
SHANK2-221ENST00000618363 SPATA31A1Q5TZJ5 1347 aa16.42■□□□□ 0.22
SHANK2-221ENST00000618363 SOX12O15370 315 aa16.41■□□□□ 0.22
SHANK2-221ENST00000618363 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.41■□□□□ 0.223e-7■■■□□ 14.6
SHANK2-221ENST00000618363 CCER1Q8TC90 406 aaPredicted RBP16.41■□□□□ 0.22
SHANK2-221ENST00000618363 NRKQ7Z2Y5 1582 aa16.41■□□□□ 0.22
SHANK2-221ENST00000618363 SSH2Q76I76 1423 aa16.4■□□□□ 0.22
SHANK2-221ENST00000618363 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
SHANK2-221ENST00000618363 SLC12A5Q9H2X9 1139 aa16.4■□□□□ 0.22
SHANK2-221ENST00000618363 BRWD3Q6RI45 1802 aa16.4■□□□□ 0.22
SHANK2-221ENST00000618363 BLMP54132 1417 aaPredicted RBP16.39■□□□□ 0.21
SHANK2-221ENST00000618363 CPSF1Q10570 1443 aaKnown RBP16.39■□□□□ 0.21
SHANK2-221ENST00000618363 TMF1P82094 1093 aa16.39■□□□□ 0.21
SHANK2-221ENST00000618363 LARP1Q6PKG0 1096 aaKnown RBP16.39■□□□□ 0.21
SHANK2-221ENST00000618363 TCP11L2Q8N4U5 519 aa16.39■□□□□ 0.21
SHANK2-221ENST00000618363 AKAP12Q02952 1782 aa16.38■□□□□ 0.21
SHANK2-221ENST00000618363 PDE3BQ13370 1112 aa16.38■□□□□ 0.21
SHANK2-221ENST00000618363 CDCA8Q53HL2 280 aa16.38■□□□□ 0.21
SHANK2-221ENST00000618363 THRAP3Q9Y2W1 955 aaKnown RBP16.38■□□□□ 0.21
SHANK2-221ENST00000618363 BARGINQ6ZT62 677 aa16.37■□□□□ 0.21
SHANK2-221ENST00000618363 ZRANB1Q9UGI0 708 aa16.37■□□□□ 0.21
SHANK2-221ENST00000618363 AATKQ6ZMQ8 1374 aa16.37■□□□□ 0.21
SHANK2-221ENST00000618363 USP47Q96K76 1375 aa16.37■□□□□ 0.21
SHANK2-221ENST00000618363 NINLQ9Y2I6 1382 aa16.37■□□□□ 0.21
SHANK2-221ENST00000618363 CAMTA1Q9Y6Y1 1673 aa16.37■□□□□ 0.21
SHANK2-221ENST00000618363 SLIT3O75094 1523 aa16.36■□□□□ 0.21
SHANK2-221ENST00000618363 CSB-PGBD3P0DP91 1061 aa16.36■□□□□ 0.21
SHANK2-221ENST00000618363 TOM1L2Q6ZVM7 507 aa16.36■□□□□ 0.21
SHANK2-221ENST00000618363 TESK2Q96S53 571 aa16.36■□□□□ 0.21
SHANK2-221ENST00000618363 PIK3C2AO00443 1686 aa16.36■□□□□ 0.21
SHANK2-221ENST00000618363 BAG6P46379 1132 aa16.35■□□□□ 0.21
SHANK2-221ENST00000618363 FAM196AQ6ZSG2 479 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms