RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 TBX22Q9Y458 520 aa11.36□□□□□ -0.59
SCAMP1-206ENST00000618166 ADAMTS13Q76LX8 1427 aa11.36□□□□□ -0.59
SCAMP1-206ENST00000618166 EIF2AK4Q9P2K8 1649 aaKnown RBP11.36□□□□□ -0.59
SCAMP1-206ENST00000618166 SPHKAPQ2M3C7 1700 aa11.36□□□□□ -0.59
SCAMP1-206ENST00000618166 PPP1R15AO75807 674 aaPredicted RBP11.35□□□□□ -0.59
SCAMP1-206ENST00000618166 MYOM2P54296 1465 aa11.34□□□□□ -0.59
SCAMP1-206ENST00000618166 RIMS2Q9UQ26 1411 aa11.33□□□□□ -0.6
SCAMP1-206ENST00000618166 MTUS2Q5JR59 1369 aa11.33□□□□□ -0.6
SCAMP1-206ENST00000618166 KRT27Q7Z3Y8 459 aa11.33□□□□□ -0.6
SCAMP1-206ENST00000618166 AMOTL2Q9Y2J4 779 aa11.33□□□□□ -0.6
SCAMP1-206ENST00000618166 TRPM2O94759 1503 aa11.33□□□□□ -0.6
SCAMP1-206ENST00000618166 SOS2Q07890 1332 aaPredicted RBP11.32□□□□□ -0.6
SCAMP1-206ENST00000618166 EZH2Q15910 746 aaKnown RBP11.32□□□□□ -0.6
SCAMP1-206ENST00000618166 COL22A1Q8NFW1 1626 aaPredicted RBP11.32□□□□□ -0.6
SCAMP1-206ENST00000618166 TSPY4P0CV99 314 aa11.31□□□□□ -0.6
SCAMP1-206ENST00000618166 TSPY10P0CW01 314 aa11.31□□□□□ -0.6
SCAMP1-206ENST00000618166 CHRM1P11229 460 aaPredicted RBP11.3□□□□□ -0.6
SCAMP1-206ENST00000618166 GSE1Q14687 1217 aa11.3□□□□□ -0.6
SCAMP1-206ENST00000618166 FAM182BQ5T319 152 aa11.3□□□□□ -0.6
SCAMP1-206ENST00000618166 UNC5CLQ8IV45 518 aa11.3□□□□□ -0.6
SCAMP1-206ENST00000618166 ORAI2Q96SN7 254 aa11.3□□□□□ -0.6
SCAMP1-206ENST00000618166 PPP1R1BQ9UD71 204 aaPredicted RBP11.3□□□□□ -0.6
SCAMP1-206ENST00000618166 ARHGEF5Q12774 1597 aa11.3□□□□□ -0.6
SCAMP1-206ENST00000618166 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.3□□□□□ -0.6
SCAMP1-206ENST00000618166 NINLQ9Y2I6 1382 aa11.29□□□□□ -0.6
SCAMP1-206ENST00000618166 SLIT2O94813 1529 aa11.29□□□□□ -0.6
SCAMP1-206ENST00000618166 EHBP1L1Q8N3D4 1523 aa11.29□□□□□ -0.6
SCAMP1-206ENST00000618166 C1orf167Q5SNV9 1468 aa11.29□□□□□ -0.6
SCAMP1-206ENST00000618166 HOXB3P14651 431 aaPredicted RBP11.28□□□□□ -0.6
SCAMP1-206ENST00000618166 PSEN1P49768 467 aa11.28□□□□□ -0.6
SCAMP1-206ENST00000618166 RSPH4AQ5TD94 716 aa11.28□□□□□ -0.6
SCAMP1-206ENST00000618166 LAMC1P11047 1609 aa11.28□□□□□ -0.6
SCAMP1-206ENST00000618166 NOS1P29475 1434 aa11.28□□□□□ -0.6
SCAMP1-206ENST00000618166 MYO5BQ9ULV0 1848 aa11.28□□□□□ -0.6
SCAMP1-206ENST00000618166 MARF1Q9Y4F3 1742 aaKnown RBP11.27□□□□□ -0.6
SCAMP1-206ENST00000618166 PIK3R4Q99570 1358 aa11.27□□□□□ -0.6
SCAMP1-206ENST00000618166 ADGRL3Q9HAR2 1447 aa11.27□□□□□ -0.61
SCAMP1-206ENST00000618166 FKBP8Q14318 412 aa11.27□□□□□ -0.61
SCAMP1-206ENST00000618166 CEP162Q5TB80 1403 aa11.25□□□□□ -0.61
SCAMP1-206ENST00000618166 ONECUT3O60422 494 aaPredicted RBP11.25□□□□□ -0.61
SCAMP1-206ENST00000618166 GIGYF1O75420 1035 aaPredicted RBP11.25□□□□□ -0.61
SCAMP1-206ENST00000618166 HOXB1P14653 301 aaPredicted RBP11.25□□□□□ -0.61
SCAMP1-206ENST00000618166 DPY19L2Q6NUT2 758 aa11.25□□□□□ -0.61
SCAMP1-206ENST00000618166 CAMKK2Q96RR4 588 aa11.25□□□□□ -0.61
SCAMP1-206ENST00000618166 NALCNQ8IZF0 1738 aa11.25□□□□□ -0.61
SCAMP1-206ENST00000618166 XRN1Q8IZH2 1706 aaKnown RBP11.25□□□□□ -0.61
SCAMP1-206ENST00000618166 DISP2A7MBM2 1401 aa11.24□□□□□ -0.61
SCAMP1-206ENST00000618166 RGPD1P0DJD0 1748 aa11.24□□□□□ -0.61
SCAMP1-206ENST00000618166 TNS1Q9HBL0 1735 aaKnown RBP11.24□□□□□ -0.61
SCAMP1-206ENST00000618166 A0A0G2JS52 829 aa11.24□□□□□ -0.61
SCAMP1-206ENST00000618166 MYT1Q01538 1121 aa11.24□□□□□ -0.61
SCAMP1-206ENST00000618166 XPCQ01831 940 aaPredicted RBP11.24□□□□□ -0.61
SCAMP1-206ENST00000618166 SPON1Q9HCB6 807 aa11.24□□□□□ -0.61
SCAMP1-206ENST00000618166 GCC2Q8IWJ2 1684 aa11.24□□□□□ -0.61
SCAMP1-206ENST00000618166 DUOX2Q9NRD8 1548 aa11.23□□□□□ -0.61
SCAMP1-206ENST00000618166 KCNQ2O43526 872 aa11.23□□□□□ -0.61
SCAMP1-206ENST00000618166 SLC52A1Q9NWF4 448 aa11.23□□□□□ -0.61
SCAMP1-206ENST00000618166 FBXO3Q9UK99 471 aa11.23□□□□□ -0.61
SCAMP1-206ENST00000618166 TMEM131LA2VDJ0 1609 aa11.23□□□□□ -0.61
SCAMP1-206ENST00000618166 VPS72Q15906 364 aa11.22□□□□□ -0.61
SCAMP1-206ENST00000618166 CCDC9Q9Y3X0 531 aaKnown RBP11.22□□□□□ -0.61
SCAMP1-206ENST00000618166 BOLA1Q9Y3E2 137 aa11.21□□□□□ -0.61
SCAMP1-206ENST00000618166 LMTK2Q8IWU2 1503 aa11.21□□□□□ -0.61
SCAMP1-206ENST00000618166 SLC34A2O95436 690 aa11.2□□□□□ -0.62
SCAMP1-206ENST00000618166 PXDNQ92626 1479 aa11.2□□□□□ -0.62
SCAMP1-206ENST00000618166 KIF15Q9NS87 1388 aa11.2□□□□□ -0.62
SCAMP1-206ENST00000618166 CHGAP10645 457 aaKnown RBP11.19□□□□□ -0.62
SCAMP1-206ENST00000618166 HDGFP51858 240 aaKnown RBP11.19□□□□□ -0.62
SCAMP1-206ENST00000618166 PDAP1Q13442 181 aaKnown RBP11.19□□□□□ -0.62
SCAMP1-206ENST00000618166 FAM98CQ17RN3 349 aaKnown RBP11.19□□□□□ -0.62
SCAMP1-206ENST00000618166 RNF166Q96A37 237 aaPredicted RBP11.19□□□□□ -0.62
SCAMP1-206ENST00000618166 METP08581 1390 aa11.19□□□□□ -0.62
SCAMP1-206ENST00000618166 NRKQ7Z2Y5 1582 aa11.18□□□□□ -0.62
SCAMP1-206ENST00000618166 ZNF710Q8N1W2 664 aa11.18□□□□□ -0.62
SCAMP1-206ENST00000618166 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.18□□□□□ -0.62
SCAMP1-206ENST00000618166 RRP7BPQ9NSQ0 103 aa11.18□□□□□ -0.62
SCAMP1-206ENST00000618166 ERBB3P21860 1342 aa11.18□□□□□ -0.62
SCAMP1-206ENST00000618166 KANK1Q14678 1352 aa11.18□□□□□ -0.62
SCAMP1-206ENST00000618166 ERBINQ96RT1 1412 aa11.18□□□□□ -0.62
SCAMP1-206ENST00000618166 TRIM37O94972 964 aa11.17□□□□□ -0.62
SCAMP1-206ENST00000618166 NUP188Q5SRE5 1749 aa11.17□□□□□ -0.62
SCAMP1-206ENST00000618166 NRXN3Q9Y4C0 1643 aa11.17□□□□□ -0.62
SCAMP1-206ENST00000618166 G3V3G9 751 aa11.16□□□□□ -0.62
SCAMP1-206ENST00000618166 DOK7Q18PE1 504 aa11.16□□□□□ -0.62
SCAMP1-206ENST00000618166 KLHL34Q8N239 644 aa11.16□□□□□ -0.62
SCAMP1-206ENST00000618166 USP32Q8NFA0 1604 aa11.16□□□□□ -0.62
SCAMP1-206ENST00000618166 RREB1Q92766 1687 aa11.16□□□□□ -0.62
SCAMP1-206ENST00000618166 RPRD2Q5VT52 1461 aaKnown RBP11.16□□□□□ -0.62
SCAMP1-206ENST00000618166 APBA3O96018 575 aa11.16□□□□□ -0.62
SCAMP1-206ENST00000618166 PDGFDQ9GZP0 370 aaPredicted RBP11.15□□□□□ -0.63
SCAMP1-206ENST00000618166 MYOM1P52179 1685 aa11.15□□□□□ -0.63
SCAMP1-206ENST00000618166 PLCH1Q4KWH8 1693 aa11.15□□□□□ -0.63
SCAMP1-206ENST00000618166 ADGRB2O60241 1585 aa11.14□□□□□ -0.63
SCAMP1-206ENST00000618166 FOXO3O43524 673 aa11.14□□□□□ -0.63
SCAMP1-206ENST00000618166 CABP2Q9NPB3 220 aa11.14□□□□□ -0.63
SCAMP1-206ENST00000618166 ADGRL2O95490 1459 aa11.13□□□□□ -0.63
SCAMP1-206ENST00000618166 PTPN23Q9H3S7 1636 aa11.13□□□□□ -0.63
SCAMP1-206ENST00000618166 CABLES1Q8TDN4 633 aa11.13□□□□□ -0.63
SCAMP1-206ENST00000618166 NPHP3Q7Z494 1330 aa11.13□□□□□ -0.63
SCAMP1-206ENST00000618166 GOLGB1Q14789 3259 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms