RNA–Protein interactions for RNA: ENST00000618001.4

TGIF1-223, Transcript of TGFB induced factor homeobox 1, human

TSL 2 BASIC

Gene TGIF1, Length 3,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TGIF1-223	ENST00000618001	CABLES1	Q8TDN4	633 aa		11.9	□□□□□ -0.5
TGIF1-223	ENST00000618001	POLR3A	O14802	1390 aa	Predicted RBP	11.9	□□□□□ -0.5
TGIF1-223	ENST00000618001	FAM83G	A6ND36	823 aa		11.89	□□□□□ -0.51
TGIF1-223	ENST00000618001	HAP1	P54257	671 aa	Predicted RBP	11.89	□□□□□ -0.51
TGIF1-223	ENST00000618001	KDM2A	Q9Y2K7	1162 aa		11.89	□□□□□ -0.51
TGIF1-223	ENST00000618001	THSD7A	Q9UPZ6	1657 aa		11.89	□□□□□ -0.51
TGIF1-223	ENST00000618001	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.89	□□□□□ -0.51
TGIF1-223	ENST00000618001	SEPT12	Q8IYM1	358 aa		11.88	□□□□□ -0.51
TGIF1-223	ENST00000618001	NUDT16	Q96DE0	195 aa	Known RBP	11.86	□□□□□ -0.51
TGIF1-223	ENST00000618001	ZRANB1	Q9UGI0	708 aa		11.86	□□□□□ -0.51
TGIF1-223	ENST00000618001	NRK	Q7Z2Y5	1582 aa		11.86	□□□□□ -0.51
TGIF1-223	ENST00000618001	LMOD2	Q6P5Q4	547 aa		11.86	□□□□□ -0.51
TGIF1-223	ENST00000618001	PLEKHG3	A1L390	1219 aa		11.85	□□□□□ -0.51
TGIF1-223	ENST00000618001	NGDN	Q8NEJ9	315 aa	Known RBP	11.85	□□□□□ -0.51
TGIF1-223	ENST00000618001	RGPD1	P0DJD0	1748 aa		11.85	□□□□□ -0.51
TGIF1-223	ENST00000618001	BRD4	O60885	1362 aa	Predicted RBP	11.85	□□□□□ -0.51
TGIF1-223	ENST00000618001	KRT27	Q7Z3Y8	459 aa		11.84	□□□□□ -0.51
TGIF1-223	ENST00000618001	BTG4	Q9NY30	223 aa		11.84	□□□□□ -0.51
TGIF1-223	ENST00000618001	SPATA31A5	Q5VU36	1347 aa		11.84	□□□□□ -0.51
TGIF1-223	ENST00000618001	SPATA31A7	Q8IWB4	1347 aa		11.84	□□□□□ -0.51
TGIF1-223	ENST00000618001	LMO7	Q8WWI1	1683 aa		11.84	□□□□□ -0.51
TGIF1-223	ENST00000618001	QRICH2	Q9H0J4	1663 aa		11.84	□□□□□ -0.51
TGIF1-223	ENST00000618001	CDK19	Q9BWU1	502 aa		11.84	□□□□□ -0.51
TGIF1-223	ENST00000618001	CCDC61	Q9Y6R9	512 aa		11.83	□□□□□ -0.52
TGIF1-223	ENST00000618001	DISP2	A7MBM2	1401 aa		11.83	□□□□□ -0.52
TGIF1-223	ENST00000618001	LRP5	O75197	1615 aa		11.82	□□□□□ -0.52
TGIF1-223	ENST00000618001	CPD	O75976	1380 aa		11.82	□□□□□ -0.52
TGIF1-223	ENST00000618001	USP19	O94966	1318 aa		11.82	□□□□□ -0.52
TGIF1-223	ENST00000618001	TNS1	Q9HBL0	1735 aa	Known RBP	11.82	□□□□□ -0.52
TGIF1-223	ENST00000618001	TRPM1	Q7Z4N2	1603 aa		11.82	□□□□□ -0.52
TGIF1-223	ENST00000618001	CCDC9	Q9Y3X0	531 aa	Known RBP	11.81	□□□□□ -0.52
TGIF1-223	ENST00000618001	KIAA0232	Q92628	1395 aa		11.81	□□□□□ -0.52
TGIF1-223	ENST00000618001	ACE	P12821	1306 aa		11.81	□□□□□ -0.52
TGIF1-223	ENST00000618001	SLC24A1	O60721	1099 aa		11.81	□□□□□ -0.52
TGIF1-223	ENST00000618001	NBPF8	Q3BBV2	869 aa		11.81	□□□□□ -0.52
TGIF1-223	ENST00000618001	PAK3	O75914	559 aa	Predicted RBP	11.8	□□□□□ -0.52
TGIF1-223	ENST00000618001	FAM98C	Q17RN3	349 aa	Known RBP	11.8	□□□□□ -0.52
TGIF1-223	ENST00000618001	SPATA31A1	Q5TZJ5	1347 aa		11.8	□□□□□ -0.52
TGIF1-223	ENST00000618001	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.8	□□□□□ -0.52
TGIF1-223	ENST00000618001	SF3B2	Q13435	895 aa	Known RBP	11.8	□□□□□ -0.52
TGIF1-223	ENST00000618001	NBPF1	Q3BBV0	1214 aa		11.8	□□□□□ -0.52
TGIF1-223	ENST00000618001	PRDM11	Q9NQV5	511 aa		11.8	□□□□□ -0.52
TGIF1-223	ENST00000618001	PPIP5K1	Q6PFW1	1433 aa		11.8	□□□□□ -0.52
TGIF1-223	ENST00000618001	SRCAP	Q6ZRS2	3230 aa		11.79	□□□□□ -0.52
TGIF1-223	ENST00000618001	SLIT3	O75094	1523 aa		11.79	□□□□□ -0.52
TGIF1-223	ENST00000618001	SSH2	Q76I76	1423 aa		11.79	□□□□□ -0.52
TGIF1-223	ENST00000618001	PLEKHG5	O94827	1062 aa		11.78	□□□□□ -0.52
TGIF1-223	ENST00000618001	DEFB132	Q7Z7B7	95 aa		11.78	□□□□□ -0.52
TGIF1-223	ENST00000618001	CAMTA1	Q9Y6Y1	1673 aa		11.77	□□□□□ -0.52
TGIF1-223	ENST00000618001	USP6	P35125	1406 aa		11.77	□□□□□ -0.53
TGIF1-223	ENST00000618001	BARGIN	Q6ZT62	677 aa		11.77	□□□□□ -0.53
TGIF1-223	ENST00000618001	BAG6	P46379	1132 aa		11.76	□□□□□ -0.53
TGIF1-223	ENST00000618001	PARP4	Q9UKK3	1724 aa	Known RBP	11.76	□□□□□ -0.53
TGIF1-223	ENST00000618001	PIK3C2A	O00443	1686 aa		11.76	□□□□□ -0.53
TGIF1-223	ENST00000618001	AKAP12	Q02952	1782 aa		11.75	□□□□□ -0.53
TGIF1-223	ENST00000618001	COL5A2	P05997	1499 aa	Predicted RBP	11.75	□□□□□ -0.53
TGIF1-223	ENST00000618001	PARD3	Q8TEW0	1356 aa		11.74	□□□□□ -0.53
TGIF1-223	ENST00000618001	SRPK2	P78362	688 aa	Known RBP	11.74	□□□□□ -0.53
TGIF1-223	ENST00000618001	ABTB2	Q8N961	1025 aa		11.74	□□□□□ -0.53
TGIF1-223	ENST00000618001	L3MBTL2	Q969R5	705 aa		11.74	□□□□□ -0.53
TGIF1-223	ENST00000618001	THRAP3	Q9Y2W1	955 aa	Known RBP	11.74	□□□□□ -0.53
TGIF1-223	ENST00000618001	RREB1	Q92766	1687 aa		11.74	□□□□□ -0.53
TGIF1-223	ENST00000618001		A0A0G2JS52	829 aa		11.74	□□□□□ -0.53
TGIF1-223	ENST00000618001	CHRNA2	Q15822	529 aa		11.74	□□□□□ -0.53
TGIF1-223	ENST00000618001	NLRP13	Q86W25	1043 aa		11.74	□□□□□ -0.53
TGIF1-223	ENST00000618001	COL18A1	P39060	1754 aa		11.73	□□□□□ -0.53
TGIF1-223	ENST00000618001	ABCC6	O95255	1503 aa		11.73	□□□□□ -0.53
TGIF1-223	ENST00000618001	ZC3H6	P61129	1189 aa	Known RBP	11.73	□□□□□ -0.53
TGIF1-223	ENST00000618001	CABP2	Q9NPB3	220 aa		11.73	□□□□□ -0.53
TGIF1-223	ENST00000618001	USP54	Q70EL1	1684 aa		11.73	□□□□□ -0.53
TGIF1-223	ENST00000618001	WNK3	Q9BYP7	1800 aa		11.73	□□□□□ -0.53
TGIF1-223	ENST00000618001	AATK	Q6ZMQ8	1374 aa		11.73	□□□□□ -0.53
TGIF1-223	ENST00000618001	SBNO2	Q9Y2G9	1366 aa		11.73	□□□□□ -0.53
TGIF1-223	ENST00000618001	GC	P02774	474 aa		11.72	□□□□□ -0.53
TGIF1-223	ENST00000618001	FAM196A	Q6ZSG2	479 aa		11.72	□□□□□ -0.53
TGIF1-223	ENST00000618001	EVC2	Q86UK5	1308 aa		11.72	□□□□□ -0.53
TGIF1-223	ENST00000618001	PEAK1	Q9H792	1746 aa		11.72	□□□□□ -0.53
TGIF1-223	ENST00000618001	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.72	□□□□□ -0.53
TGIF1-223	ENST00000618001	RGPD4	Q7Z3J3	1758 aa		11.72	□□□□□ -0.53
TGIF1-223	ENST00000618001	NUTM2G	Q5VZR2	741 aa		11.72	□□□□□ -0.53
TGIF1-223	ENST00000618001	CRB1	P82279	1406 aa		11.71	□□□□□ -0.53
TGIF1-223	ENST00000618001	TCP11L2	Q8N4U5	519 aa		11.71	□□□□□ -0.54
TGIF1-223	ENST00000618001	STRN4	Q9NRL3	753 aa		11.71	□□□□□ -0.54
TGIF1-223	ENST00000618001	MON2	Q7Z3U7	1717 aa		11.71	□□□□□ -0.54
TGIF1-223	ENST00000618001	LRRC37A3	O60309	1634 aa		11.71	□□□□□ -0.54
TGIF1-223	ENST00000618001	CPSF1	Q10570	1443 aa	Known RBP	11.71	□□□□□ -0.54
TGIF1-223	ENST00000618001	ROCK2	O75116	1388 aa	Known RBP	11.71	□□□□□ -0.54
TGIF1-223	ENST00000618001	CABP1	Q9NZU7	370 aa		11.7	□□□□□ -0.54
TGIF1-223	ENST00000618001	C11orf95	C9JLR9	678 aa	Predicted RBP	11.7	□□□□□ -0.54
TGIF1-223	ENST00000618001	LARP1	Q6PKG0	1096 aa	Known RBP	11.7	□□□□□ -0.54
TGIF1-223	ENST00000618001	NUP188	Q5SRE5	1749 aa		11.7	□□□□□ -0.54
TGIF1-223	ENST00000618001	EVA1C	P58658	441 aa		11.7	□□□□□ -0.54
TGIF1-223	ENST00000618001	EN1	Q05925	392 aa	Predicted RBP	11.69	□□□□□ -0.54
TGIF1-223	ENST00000618001	CAMKK2	Q96RR4	588 aa		11.69	□□□□□ -0.54
TGIF1-223	ENST00000618001	NFAT5	O94916	1531 aa		11.69	□□□□□ -0.54
TGIF1-223	ENST00000618001	ZNF692	Q9BU19	519 aa	Predicted RBP	11.69	□□□□□ -0.54
TGIF1-223	ENST00000618001	FAM182B	Q5T319	152 aa		11.68	□□□□□ -0.54
TGIF1-223	ENST00000618001	TTC21A	Q8NDW8	1320 aa		11.68	□□□□□ -0.54
TGIF1-223	ENST00000618001	BCL9	O00512	1426 aa		11.68	□□□□□ -0.54
TGIF1-223	ENST00000618001	SIN3A	Q96ST3	1273 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms