RNA–Protein interactions for RNA: ENST00000617917.4

CBWD6-215, Transcript of COBW domain containing 6, humanhuman

TSL 2

Gene CBWD6, Length 3,334 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6-215ENST00000617917 PPARGC1BQ86YN6 1023 aaKnown RBP8.45□□□□□ -1.06
CBWD6-215ENST00000617917 PUS7Q96PZ0 661 aaKnown RBP8.45□□□□□ -1.06
CBWD6-215ENST00000617917 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.44□□□□□ -1.06
CBWD6-215ENST00000617917 HNRNPUL2Q1KMD3 747 aaKnown RBP8.44□□□□□ -1.06
CBWD6-215ENST00000617917 TNS3Q68CZ2 1445 aa8.44□□□□□ -1.06
CBWD6-215ENST00000617917 SSH2Q76I76 1423 aa8.44□□□□□ -1.06
CBWD6-215ENST00000617917 CEBPAP49715 358 aaPredicted RBP8.44□□□□□ -1.06
CBWD6-215ENST00000617917 HSPA2P54652 639 aa8.44□□□□□ -1.06
CBWD6-215ENST00000617917 KANK4Q5T7N3 995 aaPredicted RBP8.44□□□□□ -1.06
CBWD6-215ENST00000617917 NCAPD2Q15021 1401 aa8.44□□□□□ -1.06
CBWD6-215ENST00000617917 CIZ1Q9ULV3 898 aaPredicted RBP8.44□□□□□ -1.06
CBWD6-215ENST00000617917 CADPS2Q86UW7 1296 aa8.43□□□□□ -1.06
CBWD6-215ENST00000617917 CPDO75976 1380 aa8.43□□□□□ -1.06
CBWD6-215ENST00000617917 ONECUT3O60422 494 aaPredicted RBP8.43□□□□□ -1.06
CBWD6-215ENST00000617917 RGS12O14924 1447 aa8.42□□□□□ -1.06
CBWD6-215ENST00000617917 IDI1Q13907 227 aa8.42□□□□□ -1.06
CBWD6-215ENST00000617917 LMOD2Q6P5Q4 547 aa8.42□□□□□ -1.06
CBWD6-215ENST00000617917 C19orf44Q9H6X5 657 aa8.41□□□□□ -1.06
CBWD6-215ENST00000617917 YTHDC2Q9H6S0 1430 aaKnown RBP8.41□□□□□ -1.06
CBWD6-215ENST00000617917 NFAT5O94916 1531 aa8.41□□□□□ -1.06
CBWD6-215ENST00000617917 ARHGEF10O15013 1369 aa8.41□□□□□ -1.06
CBWD6-215ENST00000617917 NKX1-1Q15270 411 aaPredicted RBP8.41□□□□□ -1.06
CBWD6-215ENST00000617917 FNBP4Q8N3X1 1017 aaPredicted RBP8.41□□□□□ -1.06
CBWD6-215ENST00000617917 ZNF772Q68DY9 489 aaPredicted RBP8.4□□□□□ -1.06
CBWD6-215ENST00000617917 ARID3CA6NKF2 412 aa8.39□□□□□ -1.07
CBWD6-215ENST00000617917 DHX57Q6P158 1386 aaKnown RBP8.39□□□□□ -1.07
CBWD6-215ENST00000617917 RGS17Q9UGC6 210 aaPredicted RBP8.39□□□□□ -1.07
CBWD6-215ENST00000617917 FBXO31Q5XUX0 539 aaPredicted RBP8.39□□□□□ -1.07
CBWD6-215ENST00000617917 C5P01031 1676 aa8.39□□□□□ -1.07
CBWD6-215ENST00000617917 DCAF8L1A6NGE4 600 aa8.38□□□□□ -1.07
CBWD6-215ENST00000617917 ZEB1P37275 1124 aaPredicted RBP8.38□□□□□ -1.07
CBWD6-215ENST00000617917 NINLQ9Y2I6 1382 aa8.38□□□□□ -1.07
CBWD6-215ENST00000617917 LTN1O94822 1766 aa8.38□□□□□ -1.07
CBWD6-215ENST00000617917 ARFGEF2Q9Y6D5 1785 aa8.38□□□□□ -1.07
CBWD6-215ENST00000617917 C1orf115Q9H7X2 142 aa8.37□□□□□ -1.07
CBWD6-215ENST00000617917 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.37□□□□□ -1.07
CBWD6-215ENST00000617917 METP08581 1390 aa8.37□□□□□ -1.07
CBWD6-215ENST00000617917 MAP3K5Q99683 1374 aa8.37□□□□□ -1.07
CBWD6-215ENST00000617917 SAMD1Q6SPF0 538 aaPredicted RBP8.36□□□□□ -1.07
CBWD6-215ENST00000617917 ATAD2Q6PL18 1390 aa8.36□□□□□ -1.07
CBWD6-215ENST00000617917 HSPA1LP34931 641 aa8.36□□□□□ -1.07
CBWD6-215ENST00000617917 BLMP54132 1417 aaPredicted RBP8.36□□□□□ -1.07
CBWD6-215ENST00000617917 TXNDC2Q86VQ3 553 aa8.36□□□□□ -1.07
CBWD6-215ENST00000617917 U3KPZ7 1027 aaPredicted RBP8.36□□□□□ -1.07
CBWD6-215ENST00000617917 DLEC1Q9Y238 1755 aa8.35□□□□□ -1.07
CBWD6-215ENST00000617917 TUBGCP6Q96RT7 1819 aa8.35□□□□□ -1.07
CBWD6-215ENST00000617917 DISP3Q9P2K9 1392 aa8.35□□□□□ -1.07
CBWD6-215ENST00000617917 SLC24A3Q9HC58 644 aa8.35□□□□□ -1.07
CBWD6-215ENST00000617917 KIAA1551Q9HCM1 1747 aa8.35□□□□□ -1.07
CBWD6-215ENST00000617917 USP19O94966 1318 aa8.34□□□□□ -1.07
CBWD6-215ENST00000617917 TAF1LQ8IZX4 1826 aa8.34□□□□□ -1.07
CBWD6-215ENST00000617917 ROBO2Q9HCK4 1378 aa8.34□□□□□ -1.07
CBWD6-215ENST00000617917 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.34□□□□□ -1.07
CBWD6-215ENST00000617917 PLCD3Q8N3E9 789 aa8.34□□□□□ -1.07
CBWD6-215ENST00000617917 UBAP1LF5GYI3 381 aa8.34□□□□□ -1.07
CBWD6-215ENST00000617917 VGFO15240 615 aaPredicted RBP8.34□□□□□ -1.07
CBWD6-215ENST00000617917 USP31Q70CQ4 1352 aa8.33□□□□□ -1.08
CBWD6-215ENST00000617917 GGT6Q6P531 493 aa8.33□□□□□ -1.08
CBWD6-215ENST00000617917 COL5A3P25940 1745 aaPredicted RBP8.33□□□□□ -1.08
CBWD6-215ENST00000617917 KIF24Q5T7B8 1368 aa8.32□□□□□ -1.08
CBWD6-215ENST00000617917 RNF25Q96BH1 459 aaPredicted RBP8.32□□□□□ -1.08
CBWD6-215ENST00000617917 ILDR2Q71H61 639 aa8.32□□□□□ -1.08
CBWD6-215ENST00000617917 C14orf93Q9H972 538 aaKnown RBP8.32□□□□□ -1.08
CBWD6-215ENST00000617917 GTPBP6O43824 516 aaPredicted RBP8.31□□□□□ -1.08
CBWD6-215ENST00000617917 SLAIN2Q9P270 581 aa8.31□□□□□ -1.08
CBWD6-215ENST00000617917 NECTIN2Q92692 538 aa8.31□□□□□ -1.08
CBWD6-215ENST00000617917 LAMB1P07942 1786 aa8.3□□□□□ -1.08
CBWD6-215ENST00000617917 BRINP3Q76B58 766 aa8.3□□□□□ -1.08
CBWD6-215ENST00000617917 HS6ST3Q8IZP7 471 aa8.3□□□□□ -1.08
CBWD6-215ENST00000617917 CPSF1Q10570 1443 aaKnown RBP8.29□□□□□ -1.08
CBWD6-215ENST00000617917 KCNV2Q8TDN2 545 aa8.29□□□□□ -1.08
CBWD6-215ENST00000617917 NSD2O96028 1365 aa8.28□□□□□ -1.08
CBWD6-215ENST00000617917 NRXN2Q9P2S2 1712 aa8.28□□□□□ -1.08
CBWD6-215ENST00000617917 MAP2P11137 1827 aaKnown RBP8.28□□□□□ -1.08
CBWD6-215ENST00000617917 SMG6Q86US8 1419 aaKnown RBP8.28□□□□□ -1.08
CBWD6-215ENST00000617917 LRRC59Q96AG4 307 aaKnown RBP8.28□□□□□ -1.08
CBWD6-215ENST00000617917 ZMYND15Q9H091 742 aa8.28□□□□□ -1.08
CBWD6-215ENST00000617917 NPHP3Q7Z494 1330 aa8.28□□□□□ -1.08
CBWD6-215ENST00000617917 VIRMAQ69YN4 1812 aaKnown RBP8.28□□□□□ -1.08
CBWD6-215ENST00000617917 BRCA1P38398 1863 aaKnown RBP8.27□□□□□ -1.09
CBWD6-215ENST00000617917 DUOX1Q9NRD9 1551 aa8.27□□□□□ -1.09
CBWD6-215ENST00000617917 SIPA1L3O60292 1781 aaPredicted RBP8.27□□□□□ -1.09
CBWD6-215ENST00000617917 UBR2Q8IWV8 1755 aa8.27□□□□□ -1.09
CBWD6-215ENST00000617917 SPATA31A3Q5VYP0 1347 aa8.27□□□□□ -1.09
CBWD6-215ENST00000617917 CCDC9Q9Y3X0 531 aaKnown RBP8.26□□□□□ -1.09
CBWD6-215ENST00000617917 MYT1Q01538 1121 aa8.26□□□□□ -1.09
CBWD6-215ENST00000617917 MLECQ14165 292 aa8.26□□□□□ -1.09
CBWD6-215ENST00000617917 RSPH6AQ9H0K4 717 aa8.26□□□□□ -1.09
CBWD6-215ENST00000617917 TTBK1Q5TCY1 1321 aaPredicted RBP8.25□□□□□ -1.09
CBWD6-215ENST00000617917 HMGB2P26583 209 aaKnown RBP8.25□□□□□ -1.09
CBWD6-215ENST00000617917 GPBP1L1Q9HC44 474 aaPredicted RBP8.25□□□□□ -1.09
CBWD6-215ENST00000617917 MSH5O43196 834 aa8.25□□□□□ -1.09
CBWD6-215ENST00000617917 ZNF777Q9ULD5 760 aaPredicted RBP8.25□□□□□ -1.09
CBWD6-215ENST00000617917 PPP1R15AO75807 674 aaPredicted RBP8.24□□□□□ -1.09
CBWD6-215ENST00000617917 CHD4Q14839 1912 aa8.24□□□□□ -1.09
CBWD6-215ENST00000617917 RGPD5Q99666 1765 aa8.24□□□□□ -1.09
CBWD6-215ENST00000617917 MIER1Q8N108 512 aa8.24□□□□□ -1.09
CBWD6-215ENST00000617917 ZC3H15Q8WU90 426 aaKnown RBP8.24□□□□□ -1.09
CBWD6-215ENST00000617917 ARFGEF1Q9Y6D6 1849 aa8.24□□□□□ -1.09
CBWD6-215ENST00000617917 RTL1A6NKG5 1358 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms