RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 FAM83GA6ND36 823 aa32.09■■■□□ 2.73
NEDD4L-237ENST00000617539 POLR3AO14802 1390 aaPredicted RBP32.08■■■□□ 2.73
NEDD4L-237ENST00000617539 BRWD3Q6RI45 1802 aa32.07■■■□□ 2.73
NEDD4L-237ENST00000617539 COL14A1Q05707 1796 aaKnown RBP32.07■■■□□ 2.72
NEDD4L-237ENST00000617539 CENPJQ9HC77 1338 aaPredicted RBP32.06■■■□□ 2.72
NEDD4L-237ENST00000617539 PHRF1Q9P1Y6 1649 aaKnown RBP32.05■■■□□ 2.72
NEDD4L-237ENST00000617539 PAK3O75914 559 aaPredicted RBP32.05■■■□□ 2.72
NEDD4L-237ENST00000617539 NEUROD1Q13562 356 aa32.05■■■□□ 2.72
NEDD4L-237ENST00000617539 VPS72Q15906 364 aa32.04■■■□□ 2.72
NEDD4L-237ENST00000617539 CCDC61Q9Y6R9 512 aa32.04■■■□□ 2.72
NEDD4L-237ENST00000617539 ACEP12821 1306 aa32.03■■■□□ 2.72
NEDD4L-237ENST00000617539 PLEKHG3A1L390 1219 aa32.01■■■□□ 2.71
NEDD4L-237ENST00000617539 NBPF8Q3BBV2 869 aa31.99■■■□□ 2.71
NEDD4L-237ENST00000617539 CABP2Q9NPB3 220 aa31.97■■■□□ 2.71
NEDD4L-237ENST00000617539 PPIP5K1Q6PFW1 1433 aa31.97■■■□□ 2.71
NEDD4L-237ENST00000617539 SRPK2P78362 688 aaKnown RBP31.96■■■□□ 2.71
NEDD4L-237ENST00000617539 BTG4Q9NY30 223 aa31.96■■■□□ 2.71
NEDD4L-237ENST00000617539 ONECUT3O60422 494 aaPredicted RBP31.94■■■□□ 2.7
NEDD4L-237ENST00000617539 ROCK2O75116 1388 aaKnown RBP31.94■■■□□ 2.7
NEDD4L-237ENST00000617539 SEPT12Q8IYM1 358 aa31.93■■■□□ 2.7
NEDD4L-237ENST00000617539 CCDC9Q9Y3X0 531 aaKnown RBP31.93■■■□□ 2.7
NEDD4L-237ENST00000617539 NRKQ7Z2Y5 1582 aa31.93■■■□□ 2.7
NEDD4L-237ENST00000617539 NUTM2GQ5VZR2 741 aa31.92■■■□□ 2.7
NEDD4L-237ENST00000617539 KIAA0232Q92628 1395 aa31.91■■■□□ 2.7
NEDD4L-237ENST00000617539 PRDM11Q9NQV5 511 aa31.89■■■□□ 2.7
NEDD4L-237ENST00000617539 USP19O94966 1318 aa31.85■■■□□ 2.69
NEDD4L-237ENST00000617539 CHRNA2Q15822 529 aa31.84■■■□□ 2.69
NEDD4L-237ENST00000617539 ABTB2Q8N961 1025 aa31.84■■■□□ 2.69
NEDD4L-237ENST00000617539 CABP1Q9NZU7 370 aa31.84■■■□□ 2.69
NEDD4L-237ENST00000617539 USP6P35125 1406 aa31.83■■■□□ 2.69
NEDD4L-237ENST00000617539 THSD7AQ9UPZ6 1657 aa31.83■■■□□ 2.69
NEDD4L-237ENST00000617539 SPATA31A5Q5VU36 1347 aa31.83■■■□□ 2.69
NEDD4L-237ENST00000617539 SPATA31A7Q8IWB4 1347 aa31.83■■■□□ 2.69
NEDD4L-237ENST00000617539 ZC3H6P61129 1189 aaKnown RBP31.83■■■□□ 2.69
NEDD4L-237ENST00000617539 FAM98CQ17RN3 349 aaKnown RBP31.83■■■□□ 2.69
NEDD4L-237ENST00000617539 LMO7Q8WWI1 1683 aa31.83■■■□□ 2.69
NEDD4L-237ENST00000617539 EVC2Q86UK5 1308 aa31.82■■■□□ 2.68
NEDD4L-237ENST00000617539 CCDC125Q86Z20 511 aa31.82■■■□□ 2.68
NEDD4L-237ENST00000617539 BLMP54132 1417 aaPredicted RBP31.8■■■□□ 2.68
NEDD4L-237ENST00000617539 SSH2Q76I76 1423 aa31.8■■■□□ 2.68
NEDD4L-237ENST00000617539 PIK3C2AO00443 1686 aa31.8■■■□□ 2.68
NEDD4L-237ENST00000617539 AKAP12Q02952 1782 aa31.79■■■□□ 2.68
NEDD4L-237ENST00000617539 KRT27Q7Z3Y8 459 aa31.79■■■□□ 2.68
NEDD4L-237ENST00000617539 BRD4O60885 1362 aaPredicted RBP31.79■■■□□ 2.68
NEDD4L-237ENST00000617539 CPDO75976 1380 aa31.78■■■□□ 2.68
NEDD4L-237ENST00000617539 CAMTA1Q9Y6Y1 1673 aa31.77■■■□□ 2.68
NEDD4L-237ENST00000617539 TRIM26Q12899 539 aaPredicted RBP31.76■■■□□ 2.67
NEDD4L-237ENST00000617539 A0A0G2JS52 829 aa31.75■■■□□ 2.67
NEDD4L-237ENST00000617539 MYT1Q01538 1121 aa31.75■■■□□ 2.67
NEDD4L-237ENST00000617539 TONSLQ96HA7 1378 aa31.75■■■□□ 2.67
NEDD4L-237ENST00000617539 SLIT3O75094 1523 aa31.74■■■□□ 2.67
NEDD4L-237ENST00000617539 SPATA31A1Q5TZJ5 1347 aa31.74■■■□□ 2.67
NEDD4L-237ENST00000617539 SBNO2Q9Y2G9 1366 aa31.73■■■□□ 2.67
NEDD4L-237ENST00000617539 NLRP13Q86W25 1043 aa31.73■■■□□ 2.67
NEDD4L-237ENST00000617539 STRN4Q9NRL3 753 aa31.73■■■□□ 2.67
NEDD4L-237ENST00000617539 GCP02774 474 aa31.72■■■□□ 2.67
NEDD4L-237ENST00000617539 SRCAPQ6ZRS2 3230 aa31.71■■■□□ 2.67
NEDD4L-237ENST00000617539 CARD11Q9BXL7 1154 aa31.7■■■□□ 2.67
NEDD4L-237ENST00000617539 CPSF1Q10570 1443 aaKnown RBP31.68■■■□□ 2.66
NEDD4L-237ENST00000617539 DEFB132Q7Z7B7 95 aa31.68■■■□□ 2.66
NEDD4L-237ENST00000617539 MON2Q7Z3U7 1717 aa31.68■■■□□ 2.66
NEDD4L-237ENST00000617539 NLRP6P59044 892 aa31.66■■■□□ 2.66
NEDD4L-237ENST00000617539 FAM182BQ5T319 152 aa31.65■■■□□ 2.66
NEDD4L-237ENST00000617539 COL18A1P39060 1754 aa31.65■■■□□ 2.66
NEDD4L-237ENST00000617539 COL5A2P05997 1499 aaPredicted RBP31.65■■■□□ 2.66
NEDD4L-237ENST00000617539 LARP1Q6PKG0 1096 aaKnown RBP31.64■■■□□ 2.66
NEDD4L-237ENST00000617539 TTC21BQ7Z4L5 1316 aa31.63■■■□□ 2.65
NEDD4L-237ENST00000617539 RGPD1P0DJD0 1748 aa31.63■■■□□ 2.65
NEDD4L-237ENST00000617539 USP35Q9P2H5 1018 aa31.62■■■□□ 2.65
NEDD4L-237ENST00000617539 TNS1Q9HBL0 1735 aaKnown RBP31.61■■■□□ 2.65
NEDD4L-237ENST00000617539 CD163L1Q9NR16 1453 aa31.61■■■□□ 2.65
NEDD4L-237ENST00000617539 EVA1CP58658 441 aa31.61■■■□□ 2.65
NEDD4L-237ENST00000617539 ZNF692Q9BU19 519 aaPredicted RBP31.61■■■□□ 2.65
NEDD4L-237ENST00000617539 ZRANB1Q9UGI0 708 aa31.6■■■□□ 2.65
NEDD4L-237ENST00000617539 SF3B2Q13435 895 aaKnown RBP31.59■■■□□ 2.65
NEDD4L-237ENST00000617539 AATKQ6ZMQ8 1374 aa31.58■■■□□ 2.65
NEDD4L-237ENST00000617539 KTN1Q86UP2 1357 aaKnown RBP31.58■■■□□ 2.65
NEDD4L-237ENST00000617539 BARGINQ6ZT62 677 aa31.58■■■□□ 2.65
NEDD4L-237ENST00000617539 TTC21AQ8NDW8 1320 aa31.56■■■□□ 2.64
NEDD4L-237ENST00000617539 RGPD5Q99666 1765 aa31.56■■■□□ 2.64
NEDD4L-237ENST00000617539 PARP4Q9UKK3 1724 aaKnown RBP31.55■■■□□ 2.64
NEDD4L-237ENST00000617539 NFAT5O94916 1531 aa31.55■■■□□ 2.64
NEDD4L-237ENST00000617539 USP54Q70EL1 1684 aa31.55■■■□□ 2.64
NEDD4L-237ENST00000617539 ZBTB7CA1YPR0 619 aa31.54■■■□□ 2.64
NEDD4L-237ENST00000617539 TCP11L2Q8N4U5 519 aa31.53■■■□□ 2.64
NEDD4L-237ENST00000617539 CRB1P82279 1406 aa31.52■■■□□ 2.64
NEDD4L-237ENST00000617539 AXIN2Q9Y2T1 843 aa31.51■■■□□ 2.63
NEDD4L-237ENST00000617539 WNK3Q9BYP7 1800 aa31.5■■■□□ 2.63
NEDD4L-237ENST00000617539 BAG6P46379 1132 aa31.49■■■□□ 2.63
NEDD4L-237ENST00000617539 ARHGEF25Q86VW2 580 aa31.49■■■□□ 2.63
NEDD4L-237ENST00000617539 TESK2Q96S53 571 aa31.49■■■□□ 2.63
NEDD4L-237ENST00000617539 THRAP3Q9Y2W1 955 aaKnown RBP31.49■■■□□ 2.63
NEDD4L-237ENST00000617539 SLC12A5Q9H2X9 1139 aa31.48■■■□□ 2.63
NEDD4L-237ENST00000617539 DISP2A7MBM2 1401 aa31.48■■■□□ 2.63
NEDD4L-237ENST00000617539 LRRC37A3O60309 1634 aa31.46■■■□□ 2.63
NEDD4L-237ENST00000617539 USP31Q70CQ4 1352 aa31.46■■■□□ 2.63
NEDD4L-237ENST00000617539 SOX12O15370 315 aa31.46■■■□□ 2.63
NEDD4L-237ENST00000617539 KCNH5Q8NCM2 988 aa31.46■■■□□ 2.63
NEDD4L-237ENST00000617539 ST20-MTHFSA0A0A6YYL1 179 aa31.45■■■□□ 2.63
NEDD4L-237ENST00000617539 FAM196AQ6ZSG2 479 aa31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms