RNA–Protein interactions for RNA: ENST00000616995.4

PRKD1-209, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-209ENST00000616995 KIDINS220Q9ULH0 1771 aa18.36■□□□□ 0.53
PRKD1-209ENST00000616995 ABCA9Q8IUA7 1624 aa18.36■□□□□ 0.53
PRKD1-209ENST00000616995 ATF7IPQ6VMQ6 1270 aa18.35■□□□□ 0.53
PRKD1-209ENST00000616995 NGDNQ8NEJ9 315 aaKnown RBP18.35■□□□□ 0.53
PRKD1-209ENST00000616995 MIS18AQ9NYP9 233 aa18.35■□□□□ 0.53
PRKD1-209ENST00000616995 ATAD2Q6PL18 1390 aa18.35■□□□□ 0.53
PRKD1-209ENST00000616995 POLKQ9UBT6 870 aa18.35■□□□□ 0.53
PRKD1-209ENST00000616995 INO80Q9ULG1 1556 aaPredicted RBP18.34■□□□□ 0.53
PRKD1-209ENST00000616995 TRIM35Q9UPQ4 493 aa18.34■□□□□ 0.53
PRKD1-209ENST00000616995 MYOM2P54296 1465 aa18.34■□□□□ 0.53
PRKD1-209ENST00000616995 SULT6B1Q6IMI4 303 aa18.34■□□□□ 0.53
PRKD1-209ENST00000616995 SLC4A10Q6U841 1118 aa18.34■□□□□ 0.53
PRKD1-209ENST00000616995 GZF1Q9H116 711 aaPredicted RBP18.33■□□□□ 0.53
PRKD1-209ENST00000616995 DDX19BQ9UMR2 479 aa18.33■□□□□ 0.52
PRKD1-209ENST00000616995 HDGFP51858 240 aaKnown RBP18.32■□□□□ 0.52
PRKD1-209ENST00000616995 TSPYL6Q8N831 410 aa18.32■□□□□ 0.52
PRKD1-209ENST00000616995 YTHDC2Q9H6S0 1430 aaKnown RBP18.32■□□□□ 0.52
PRKD1-209ENST00000616995 IQGAP1P46940 1657 aa18.31■□□□□ 0.52
PRKD1-209ENST00000616995 MLH3Q9UHC1 1453 aa18.31■□□□□ 0.52
PRKD1-209ENST00000616995 WASLO00401 505 aaPredicted RBP18.31■□□□□ 0.52
PRKD1-209ENST00000616995 ARAP3Q8WWN8 1544 aa18.31■□□□□ 0.52
PRKD1-209ENST00000616995 AEBP1Q8IUX7 1158 aa18.31■□□□□ 0.52
PRKD1-209ENST00000616995 ABCC3O15438 1527 aa18.3■□□□□ 0.52
PRKD1-209ENST00000616995 KRT24Q2M2I5 525 aa18.3■□□□□ 0.52
PRKD1-209ENST00000616995 MCM10Q7L590 875 aa18.3■□□□□ 0.52
PRKD1-209ENST00000616995 LAMC1P11047 1609 aa18.29■□□□□ 0.52
PRKD1-209ENST00000616995 CCDC61Q9Y6R9 512 aa18.29■□□□□ 0.52
PRKD1-209ENST00000616995 INSRP06213 1382 aa18.29■□□□□ 0.52
PRKD1-209ENST00000616995 SBNO2Q9Y2G9 1366 aa18.29■□□□□ 0.52
PRKD1-209ENST00000616995 AMPHP49418 695 aa18.28■□□□□ 0.52
PRKD1-209ENST00000616995 MROH2AA6NES4 1674 aa18.28■□□□□ 0.52
PRKD1-209ENST00000616995 FCHSD2O94868 740 aa18.28■□□□□ 0.52
PRKD1-209ENST00000616995 TWISTNBQ3B726 338 aaPredicted RBP18.28■□□□□ 0.52
PRKD1-209ENST00000616995 TSPOAP1O95153 1857 aa18.28■□□□□ 0.52
PRKD1-209ENST00000616995 IL27Q8NEV9 243 aa18.27■□□□□ 0.52
PRKD1-209ENST00000616995 HECW2Q9P2P5 1572 aa18.26■□□□□ 0.51
PRKD1-209ENST00000616995 MROH1Q8NDA8 1641 aa18.26■□□□□ 0.51
PRKD1-209ENST00000616995 NFE2L2Q16236 605 aa18.25■□□□□ 0.51
PRKD1-209ENST00000616995 EID1Q9Y6B2 187 aa18.25■□□□□ 0.51
PRKD1-209ENST00000616995 RTF1Q92541 710 aaKnown RBP18.25■□□□□ 0.51
PRKD1-209ENST00000616995 HSP90AB2PQ58FF8 381 aa18.24■□□□□ 0.51
PRKD1-209ENST00000616995 KIF16BQ96L93 1317 aa18.24■□□□□ 0.51
PRKD1-209ENST00000616995 ZNF428Q96B54 188 aa18.24■□□□□ 0.51
PRKD1-209ENST00000616995 PLEKHF1Q96S99 279 aa18.24■□□□□ 0.51
PRKD1-209ENST00000616995 ADGRB3O60242 1522 aa18.24■□□□□ 0.51
PRKD1-209ENST00000616995 GNAI1P63096 354 aa18.24■□□□□ 0.51
PRKD1-209ENST00000616995 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.24■□□□□ 0.51
PRKD1-209ENST00000616995 RIMS2Q9UQ26 1411 aa18.23■□□□□ 0.51
PRKD1-209ENST00000616995 MBIPQ9NS73 344 aa18.23■□□□□ 0.51
PRKD1-209ENST00000616995 CCDC27Q2M243 656 aa18.23■□□□□ 0.51
PRKD1-209ENST00000616995 C8orf58Q8NAV2 365 aa18.23■□□□□ 0.51
PRKD1-209ENST00000616995 C22orf23Q9BZE7 217 aa18.23■□□□□ 0.51
PRKD1-209ENST00000616995 GSE1Q14687 1217 aa18.22■□□□□ 0.51
PRKD1-209ENST00000616995 ABCC11Q96J66 1382 aa18.22■□□□□ 0.51
PRKD1-209ENST00000616995 CALD1Q05682 793 aaKnown RBP18.22■□□□□ 0.51
PRKD1-209ENST00000616995 RSPH6AQ9H0K4 717 aa18.21■□□□□ 0.51
PRKD1-209ENST00000616995 BRPF3Q9ULD4 1205 aa18.21■□□□□ 0.51
PRKD1-209ENST00000616995 NSD2O96028 1365 aa18.21■□□□□ 0.5
PRKD1-209ENST00000616995 VWDEQ8N2E2 1590 aa18.2■□□□□ 0.5
PRKD1-209ENST00000616995 DEPDC5O75140 1603 aa18.2■□□□□ 0.5
PRKD1-209ENST00000616995 NLRP6P59044 892 aa18.2■□□□□ 0.5
PRKD1-209ENST00000616995 PPIP5K1Q6PFW1 1433 aa18.2■□□□□ 0.5
PRKD1-209ENST00000616995 HSP90AB1P08238 724 aaKnown RBP18.2■□□□□ 0.5
PRKD1-209ENST00000616995 METP08581 1390 aa18.2■□□□□ 0.5
PRKD1-209ENST00000616995 FRMPD1Q5SYB0 1578 aa18.2■□□□□ 0.5
PRKD1-209ENST00000616995 NEO1Q92859 1461 aa18.2■□□□□ 0.5
PRKD1-209ENST00000616995 HSCBQ8IWL3 235 aa18.19■□□□□ 0.5
PRKD1-209ENST00000616995 QRICH2Q9H0J4 1663 aa18.19■□□□□ 0.5
PRKD1-209ENST00000616995 GLI2P10070 1586 aa18.19■□□□□ 0.5
PRKD1-209ENST00000616995 TULP4Q9NRJ4 1543 aa18.19■□□□□ 0.5
PRKD1-209ENST00000616995 FOXO3O43524 673 aa18.19■□□□□ 0.5
PRKD1-209ENST00000616995 ACEP12821 1306 aa18.19■□□□□ 0.5
PRKD1-209ENST00000616995 TPRNQ4KMQ1 711 aa18.18■□□□□ 0.5
PRKD1-209ENST00000616995 USP35Q9P2H5 1018 aa18.18■□□□□ 0.5
PRKD1-209ENST00000616995 PRKCSHP14314 528 aaPredicted RBP18.18■□□□□ 0.5
PRKD1-209ENST00000616995 MYOM1P52179 1685 aa18.17■□□□□ 0.5
PRKD1-209ENST00000616995 ZMYM3Q14202 1370 aa18.17■□□□□ 0.5
PRKD1-209ENST00000616995 LMOD3Q0VAK6 560 aa18.17■□□□□ 0.5
PRKD1-209ENST00000616995 AMOTL2Q9Y2J4 779 aa18.16■□□□□ 0.5
PRKD1-209ENST00000616995 ADGRB1O14514 1584 aa18.16■□□□□ 0.5
PRKD1-209ENST00000616995 VAMP4O75379 141 aa18.15■□□□□ 0.5
PRKD1-209ENST00000616995 XPCQ01831 940 aaPredicted RBP18.15■□□□□ 0.5
PRKD1-209ENST00000616995 USHBP1Q8N6Y0 703 aa18.15■□□□□ 0.5
PRKD1-209ENST00000616995 NINLQ9Y2I6 1382 aa18.15■□□□□ 0.5
PRKD1-209ENST00000616995 F6X3S4 739 aa18.15■□□□□ 0.5
PRKD1-209ENST00000616995 TBC1D2Q9BYX2 928 aa18.15■□□□□ 0.5
PRKD1-209ENST00000616995 TSPYL4Q9UJ04 414 aa18.15■□□□□ 0.5
PRKD1-209ENST00000616995 SLC4A2P04920 1241 aa18.15■□□□□ 0.5
PRKD1-209ENST00000616995 CHD1LQ86WJ1 897 aa18.15■□□□□ 0.5
PRKD1-209ENST00000616995 PUS7Q96PZ0 661 aaKnown RBP18.15■□□□□ 0.5
PRKD1-209ENST00000616995 LTKP29376 864 aa18.14■□□□□ 0.5
PRKD1-209ENST00000616995 ANO8Q9HCE9 1232 aaPredicted RBP18.14■□□□□ 0.5
PRKD1-209ENST00000616995 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.49
PRKD1-209ENST00000616995 SMARCA5O60264 1052 aaPredicted RBP18.14■□□□□ 0.49
PRKD1-209ENST00000616995 EIF4A2Q14240 407 aaKnown RBP18.14■□□□□ 0.49
PRKD1-209ENST00000616995 IL13P35225 146 aa18.13■□□□□ 0.49
PRKD1-209ENST00000616995 EIF2S2P20042 333 aaKnown RBP18.13■□□□□ 0.49
PRKD1-209ENST00000616995 ZBTB40Q9NUA8 1239 aa18.13■□□□□ 0.49
PRKD1-209ENST00000616995 NRXN1Q9ULB1 1477 aa18.12■□□□□ 0.49
PRKD1-209ENST00000616995 CT47B1P0C2W7 299 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms