RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-238ENST00000616352 PIK3C2AO00443 1686 aa31.57■■■□□ 2.64
ACACA-238ENST00000616352 ALS2Q96Q42 1657 aa31.56■■■□□ 2.64
ACACA-238ENST00000616352 TTC21BQ7Z4L5 1316 aa31.55■■■□□ 2.64
ACACA-238ENST00000616352 AMER1Q5JTC6 1135 aaPredicted RBP31.55■■■□□ 2.64
ACACA-238ENST00000616352 USP54Q70EL1 1684 aa31.53■■■□□ 2.64
ACACA-238ENST00000616352 KRT28Q7Z3Y7 464 aa31.53■■■□□ 2.64
ACACA-238ENST00000616352 MARF1Q9Y4F3 1742 aaKnown RBP31.53■■■□□ 2.64
ACACA-238ENST00000616352 PIP4K2BP78356 416 aa31.53■■■□□ 2.64
ACACA-238ENST00000616352 XPCQ01831 940 aaPredicted RBP31.53■■■□□ 2.64
ACACA-238ENST00000616352 PHLPP1O60346 1717 aa31.53■■■□□ 2.64
ACACA-238ENST00000616352 NPC1L1Q9UHC9 1359 aa31.52■■■□□ 2.64
ACACA-238ENST00000616352 SOS2Q07890 1332 aaPredicted RBP31.52■■■□□ 2.64
ACACA-238ENST00000616352 CGNL1Q0VF96 1302 aa31.51■■■□□ 2.64
ACACA-238ENST00000616352 TTC21AQ8NDW8 1320 aa31.51■■■□□ 2.64
ACACA-238ENST00000616352 SBNO1A3KN83 1393 aa31.5■■■□□ 2.63
ACACA-238ENST00000616352 DIEXFQ68CQ4 756 aaKnown RBP31.5■■■□□ 2.63
ACACA-238ENST00000616352 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.5■■■□□ 2.63
ACACA-238ENST00000616352 FYB1O15117 783 aa31.48■■■□□ 2.63
ACACA-238ENST00000616352 COL16A1Q07092 1604 aaPredicted RBP31.48■■■□□ 2.63
ACACA-238ENST00000616352 NSD2O96028 1365 aa31.47■■■□□ 2.63
ACACA-238ENST00000616352 SCAF1Q9H7N4 1312 aaKnown RBP31.46■■■□□ 2.63
ACACA-238ENST00000616352 NME9Q86XW9 330 aa31.46■■■□□ 2.63
ACACA-238ENST00000616352 TNS3Q68CZ2 1445 aa31.45■■■□□ 2.63
ACACA-238ENST00000616352 PAK3O75914 559 aaPredicted RBP31.44■■■□□ 2.62
ACACA-238ENST00000616352 OVOS2A0A0J9YW53 1432 aa31.43■■■□□ 2.62
ACACA-238ENST00000616352 OVOS2Q6IE36 1432 aa31.43■■■□□ 2.62
ACACA-238ENST00000616352 SPATA31A3Q5VYP0 1347 aa31.42■■■□□ 2.62
ACACA-238ENST00000616352 USP31Q70CQ4 1352 aa31.42■■■□□ 2.62
ACACA-238ENST00000616352 CRYBG1Q9Y4K1 1723 aa31.41■■■□□ 2.62
ACACA-238ENST00000616352 CC2D1BQ5T0F9 858 aaKnown RBP31.41■■■□□ 2.62
ACACA-238ENST00000616352 GGNBP2Q9H3C7 697 aa31.41■■■□□ 2.62
ACACA-238ENST00000616352 ZRANB1Q9UGI0 708 aa31.4■■■□□ 2.62
ACACA-238ENST00000616352 ABTB2Q8N961 1025 aa31.39■■■□□ 2.62
ACACA-238ENST00000616352 PARD3Q8TEW0 1356 aa31.38■■■□□ 2.61
ACACA-238ENST00000616352 MED1Q15648 1581 aaPredicted RBP31.37■■■□□ 2.61
ACACA-238ENST00000616352 ARHGEF10O15013 1369 aa31.36■■■□□ 2.61
ACACA-238ENST00000616352 ABCA3Q99758 1704 aa31.35■■■□□ 2.61
ACACA-238ENST00000616352 MAP2P11137 1827 aaKnown RBP31.35■■■□□ 2.61
ACACA-238ENST00000616352 PHRF1Q9P1Y6 1649 aaKnown RBP31.35■■■□□ 2.61
ACACA-238ENST00000616352 CNGB1Q14028 1251 aaPredicted RBP31.35■■■□□ 2.61
ACACA-238ENST00000616352 PRKRIP1Q9H875 184 aaPredicted RBP31.35■■■□□ 2.61
ACACA-238ENST00000616352 COL22A1Q8NFW1 1626 aaPredicted RBP31.34■■■□□ 2.61
ACACA-238ENST00000616352 NLRP6P59044 892 aa31.34■■■□□ 2.61
ACACA-238ENST00000616352 COG3Q96JB2 828 aa31.33■■■□□ 2.61
ACACA-238ENST00000616352 SLIT3O75094 1523 aa31.32■■■□□ 2.6
ACACA-238ENST00000616352 NUTM2GQ5VZR2 741 aa31.32■■■□□ 2.6
ACACA-238ENST00000616352 LRRC59Q96AG4 307 aaKnown RBP31.32■■■□□ 2.6
ACACA-238ENST00000616352 ANP32CO43423 234 aa31.31■■■□□ 2.6
ACACA-238ENST00000616352 LMOD2Q6P5Q4 547 aa31.31■■■□□ 2.6
ACACA-238ENST00000616352 MORC1Q86VD1 984 aa31.31■■■□□ 2.6
ACACA-238ENST00000616352 USP19O94966 1318 aa31.3■■■□□ 2.6
ACACA-238ENST00000616352 SHPRHQ149N8 1683 aa31.3■■■□□ 2.6
ACACA-238ENST00000616352 RALBP1Q15311 655 aa31.3■■■□□ 2.6
ACACA-238ENST00000616352 NLRP13Q86W25 1043 aa31.3■■■□□ 2.6
ACACA-238ENST00000616352 NFAT5O94916 1531 aa31.26■■■□□ 2.6
ACACA-238ENST00000616352 LTN1O94822 1766 aa31.26■■■□□ 2.6
ACACA-238ENST00000616352 PNPLA6Q8IY17 1366 aa31.26■■■□□ 2.59
ACACA-238ENST00000616352 AATKQ6ZMQ8 1374 aa31.23■■■□□ 2.59
ACACA-238ENST00000616352 HSPA1LP34931 641 aa31.22■■■□□ 2.59
ACACA-238ENST00000616352 TNNT2P45379 298 aaPredicted RBP31.2■■■□□ 2.59
ACACA-238ENST00000616352 MYBBP1AQ9BQG0 1328 aaKnown RBP31.19■■■□□ 2.58
ACACA-238ENST00000616352 GCP02774 474 aa31.18■■■□□ 2.58
ACACA-238ENST00000616352 FBLN1P23142 703 aa31.18■■■□□ 2.58
ACACA-238ENST00000616352 PPP2R1AP30153 589 aa31.18■■■□□ 2.58
ACACA-238ENST00000616352 KCNH5Q8NCM2 988 aa31.18■■■□□ 2.58
ACACA-238ENST00000616352 CABLES1Q8TDN4 633 aa31.18■■■□□ 2.58
ACACA-238ENST00000616352 FBXO41Q8TF61 875 aa31.17■■■□□ 2.58
ACACA-238ENST00000616352 JCADQ9P266 1359 aa31.17■■■□□ 2.58
ACACA-238ENST00000616352 PEAK1Q9H792 1746 aa31.17■■■□□ 2.58
ACACA-238ENST00000616352 MIER1Q8N108 512 aa31.16■■■□□ 2.58
ACACA-238ENST00000616352 SMG6Q86US8 1419 aaKnown RBP31.16■■■□□ 2.58
ACACA-238ENST00000616352 SOX12O15370 315 aa31.14■■■□□ 2.58
ACACA-238ENST00000616352 PLEKHG5O94827 1062 aa31.14■■■□□ 2.58
ACACA-238ENST00000616352 POLKQ9UBT6 870 aa31.13■■■□□ 2.57
ACACA-238ENST00000616352 COL18A1P39060 1754 aa31.11■■■□□ 2.57
ACACA-238ENST00000616352 RRS1Q15050 365 aaKnown RBP31.11■■■□□ 2.57
ACACA-238ENST00000616352 RGPD5Q99666 1765 aa31.1■■■□□ 2.57
ACACA-238ENST00000616352 MAP3K19Q56UN5 1328 aa31.1■■■□□ 2.57
ACACA-238ENST00000616352 CPDO75976 1380 aa31.09■■■□□ 2.57
ACACA-238ENST00000616352 EMILIN1Q9Y6C2 1016 aa31.09■■■□□ 2.57
ACACA-238ENST00000616352 MTHFSP49914 203 aa31.08■■■□□ 2.57
ACACA-238ENST00000616352 ARHGEF25Q86VW2 580 aa31.08■■■□□ 2.57
ACACA-238ENST00000616352 CDK12Q9NYV4 1490 aaPredicted RBP31.08■■■□□ 2.57
ACACA-238ENST00000616352 KIF24Q5T7B8 1368 aa31.07■■■□□ 2.56
ACACA-238ENST00000616352 ABCC6O95255 1503 aa31.05■■■□□ 2.56
ACACA-238ENST00000616352 ZC3H6P61129 1189 aaKnown RBP31.05■■■□□ 2.56
ACACA-238ENST00000616352 RTL1A6NKG5 1358 aa31.04■■■□□ 2.56
ACACA-238ENST00000616352 KIAA0232Q92628 1395 aa31.04■■■□□ 2.56
ACACA-238ENST00000616352 LMO7Q8WWI1 1683 aa31.03■■■□□ 2.56
ACACA-238ENST00000616352 HAP1P54257 671 aaPredicted RBP31.03■■■□□ 2.56
ACACA-238ENST00000616352 COL3A1P02461 1466 aaPredicted RBP31.03■■■□□ 2.56
ACACA-238ENST00000616352 SPATA31A6Q5VVP1 1343 aa31.02■■■□□ 2.56
ACACA-238ENST00000616352 FLT4P35916 1363 aa31.02■■■□□ 2.56
ACACA-238ENST00000616352 CCER2I3L3R5 266 aa31.02■■■□□ 2.56
ACACA-238ENST00000616352 INSRP06213 1382 aa31.02■■■□□ 2.56
ACACA-238ENST00000616352 COL14A1Q05707 1796 aaKnown RBP31.01■■■□□ 2.55
ACACA-238ENST00000616352 CCDC184Q52MB2 194 aa31.01■■■□□ 2.55
ACACA-238ENST00000616352 PPM1GO15355 546 aaPredicted RBP30.99■■■□□ 2.55
ACACA-238ENST00000616352 LRP6O75581 1613 aa30.98■■■□□ 2.55
ACACA-238ENST00000616352 HOXC9P31274 260 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms