RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-222	ENST00000615940	ADGRB3	O60242	1522 aa		12.38	□□□□□ -0.43
LRTOMT-222	ENST00000615940	KDM5A	P29375	1690 aa	Known RBP	12.38	□□□□□ -0.43
LRTOMT-222	ENST00000615940	MYH16	Q9H6N6	1097 aa		12.38	□□□□□ -0.43
LRTOMT-222	ENST00000615940	CDCA8	Q53HL2	280 aa		12.37	□□□□□ -0.43
LRTOMT-222	ENST00000615940	SPRYD3	Q8NCJ5	442 aa		12.37	□□□□□ -0.43
LRTOMT-222	ENST00000615940	TRAIP	Q9BWF2	469 aa		12.37	□□□□□ -0.43
LRTOMT-222	ENST00000615940	POLR1A	O95602	1720 aa	Predicted RBP	12.36	□□□□□ -0.43
LRTOMT-222	ENST00000615940	CCDC144A	A2RUR9	1427 aa		12.36	□□□□□ -0.43
LRTOMT-222	ENST00000615940	NEUROD2	Q15784	382 aa		12.36	□□□□□ -0.43
LRTOMT-222	ENST00000615940	STAG3	Q9UJ98	1225 aa		12.36	□□□□□ -0.43
LRTOMT-222	ENST00000615940	TCERG1	O14776	1098 aa	Known RBP	12.35	□□□□□ -0.43
LRTOMT-222	ENST00000615940	CCDC96	Q2M329	555 aa		12.35	□□□□□ -0.43
LRTOMT-222	ENST00000615940	DIEXF	Q68CQ4	756 aa	Known RBP	12.35	□□□□□ -0.43
LRTOMT-222	ENST00000615940	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.35	□□□□□ -0.43
LRTOMT-222	ENST00000615940	TERF2IP	Q9NYB0	399 aa		12.35	□□□□□ -0.43
LRTOMT-222	ENST00000615940	MYBPC2	Q14324	1141 aa		12.34	□□□□□ -0.43
LRTOMT-222	ENST00000615940	NBPF9	Q3BBW0	867 aa		12.34	□□□□□ -0.43
LRTOMT-222	ENST00000615940	OTUD6B	Q8N6M0	293 aa		12.34	□□□□□ -0.43
LRTOMT-222	ENST00000615940	SIN3A	Q96ST3	1273 aa		12.34	□□□□□ -0.43
LRTOMT-222	ENST00000615940	PPL	O60437	1756 aa		12.34	□□□□□ -0.43
LRTOMT-222	ENST00000615940	GZF1	Q9H116	711 aa	Predicted RBP	12.34	□□□□□ -0.43
LRTOMT-222	ENST00000615940	SENP3	Q9H4L4	574 aa	Predicted RBP	12.34	□□□□□ -0.43
LRTOMT-222	ENST00000615940	IFT172	Q9UG01	1749 aa		12.33	□□□□□ -0.43
LRTOMT-222	ENST00000615940	HSP90AB3P	Q58FF7	597 aa		12.33	□□□□□ -0.44
LRTOMT-222	ENST00000615940	NUTM2D	Q5VT03	806 aa	Predicted RBP	12.33	□□□□□ -0.44
LRTOMT-222	ENST00000615940	PDCL3	Q9H2J4	239 aa		12.33	□□□□□ -0.44
LRTOMT-222	ENST00000615940	RGL3	Q3MIN7	710 aa		12.32	□□□□□ -0.44
LRTOMT-222	ENST00000615940	NME8	Q8N427	588 aa		12.32	□□□□□ -0.44
LRTOMT-222	ENST00000615940	NRDC	O43847	1150 aa		12.31	□□□□□ -0.44
LRTOMT-222	ENST00000615940	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.31	□□□□□ -0.44
LRTOMT-222	ENST00000615940	SPATA31E1	Q6ZUB1	1445 aa		12.31	□□□□□ -0.44
LRTOMT-222	ENST00000615940	NEURL4	Q96JN8	1562 aa		12.3	□□□□□ -0.44
LRTOMT-222	ENST00000615940	SLIT1	O75093	1534 aa		12.3	□□□□□ -0.44
LRTOMT-222	ENST00000615940	NCKAP5L	Q9HCH0	1330 aa		12.3	□□□□□ -0.44
LRTOMT-222	ENST00000615940	SEMA3F	Q13275	785 aa		12.3	□□□□□ -0.44
LRTOMT-222	ENST00000615940	ANKRD13A	Q8IZ07	590 aa		12.3	□□□□□ -0.44
LRTOMT-222	ENST00000615940	NOP58	Q9Y2X3	529 aa	Known RBP	12.3	□□□□□ -0.44
LRTOMT-222	ENST00000615940	NEXMIF	Q5QGS0	1516 aa		12.3	□□□□□ -0.44
LRTOMT-222	ENST00000615940	ARHGAP23	Q9P227	1491 aa		12.3	□□□□□ -0.44
LRTOMT-222	ENST00000615940	TMEM2	Q9UHN6	1383 aa		12.3	□□□□□ -0.44
LRTOMT-222	ENST00000615940	LTK	P29376	864 aa		12.29	□□□□□ -0.44
LRTOMT-222	ENST00000615940	RALBP1	Q15311	655 aa		12.29	□□□□□ -0.44
LRTOMT-222	ENST00000615940	RIMS2	Q9UQ26	1411 aa		12.29	□□□□□ -0.44
LRTOMT-222	ENST00000615940	ZFYVE9	O95405	1425 aa		12.28	□□□□□ -0.44
LRTOMT-222	ENST00000615940	SMAP1	Q8IYB5	467 aa	Predicted RBP	12.28	□□□□□ -0.44
LRTOMT-222	ENST00000615940	IQGAP1	P46940	1657 aa		12.28	□□□□□ -0.44
LRTOMT-222	ENST00000615940	TPD52L2	O43399	206 aa	Known RBP	12.27	□□□□□ -0.44
LRTOMT-222	ENST00000615940	UTP14C	Q5TAP6	766 aa	Known RBP	12.27	□□□□□ -0.44
LRTOMT-222	ENST00000615940	TAF3	Q5VWG9	929 aa		12.27	□□□□□ -0.44
LRTOMT-222	ENST00000615940	SCAF11	Q99590	1463 aa	Known RBP	12.27	□□□□□ -0.45
LRTOMT-222	ENST00000615940	SMARCA5	O60264	1052 aa	Predicted RBP	12.27	□□□□□ -0.45
LRTOMT-222	ENST00000615940	ERCC3	P19447	782 aa		12.27	□□□□□ -0.45
LRTOMT-222	ENST00000615940	TXNDC2	Q86VQ3	553 aa		12.27	□□□□□ -0.45
LRTOMT-222	ENST00000615940	SDR16C5	Q8N3Y7	309 aa		12.27	□□□□□ -0.45
LRTOMT-222	ENST00000615940	GORAB	Q5T7V8	394 aa		12.26	□□□□□ -0.45
LRTOMT-222	ENST00000615940	YY1AP1	Q9H869	796 aa		12.26	□□□□□ -0.45
LRTOMT-222	ENST00000615940	ANKLE2	Q86XL3	938 aa		12.25	□□□□□ -0.45
LRTOMT-222	ENST00000615940	TSPAN18	Q96SJ8	248 aa		12.25	□□□□□ -0.45
LRTOMT-222	ENST00000615940	GOLIM4	O00461	696 aa		12.25	□□□□□ -0.45
LRTOMT-222	ENST00000615940	IRF6	O14896	467 aa		12.25	□□□□□ -0.45
LRTOMT-222	ENST00000615940	CALR	P27797	417 aa	Known RBP	12.25	□□□□□ -0.45
LRTOMT-222	ENST00000615940	SETDB1	Q15047	1291 aa		12.25	□□□□□ -0.45
LRTOMT-222	ENST00000615940	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.25	□□□□□ -0.45
LRTOMT-222	ENST00000615940	NRXN3	Q9Y4C0	1643 aa		12.24	□□□□□ -0.45
LRTOMT-222	ENST00000615940	MARCH6	O60337	910 aa		12.24	□□□□□ -0.45
LRTOMT-222	ENST00000615940	ARID4A	P29374	1257 aa	Predicted RBP	12.24	□□□□□ -0.45
LRTOMT-222	ENST00000615940	WASHC2A	Q641Q2	1341 aa		12.24	□□□□□ -0.45
LRTOMT-222	ENST00000615940	VGLL3	A8MV65	326 aa		12.23	□□□□□ -0.45
LRTOMT-222	ENST00000615940	PPP1R15A	O75807	674 aa	Predicted RBP	12.23	□□□□□ -0.45
LRTOMT-222	ENST00000615940	EID1	Q9Y6B2	187 aa		12.23	□□□□□ -0.45
LRTOMT-222	ENST00000615940	SLC20A2	Q08357	652 aa		12.23	□□□□□ -0.45
LRTOMT-222	ENST00000615940	GEMIN8	Q9NWZ8	242 aa	Known RBP	12.23	□□□□□ -0.45
LRTOMT-222	ENST00000615940	PPME1	Q9Y570	386 aa		12.23	□□□□□ -0.45
LRTOMT-222	ENST00000615940	SETD1A	O15047	1707 aa	Known RBP	12.22	□□□□□ -0.45
LRTOMT-222	ENST00000615940	NPHP4	O75161	1426 aa	Predicted RBP	12.22	□□□□□ -0.45
LRTOMT-222	ENST00000615940	ADGRF5	Q8IZF2	1346 aa		12.22	□□□□□ -0.45
LRTOMT-222	ENST00000615940	MED14	O60244	1454 aa		12.22	□□□□□ -0.45
LRTOMT-222	ENST00000615940	MAPK8IP2	Q13387	824 aa	Predicted RBP	12.22	□□□□□ -0.45
LRTOMT-222	ENST00000615940	CCDC82	Q8N4S0	544 aa		12.22	□□□□□ -0.45
LRTOMT-222	ENST00000615940	DCAF11	Q8TEB1	546 aa		12.22	□□□□□ -0.45
LRTOMT-222	ENST00000615940	MKL1	Q969V6	931 aa		12.22	□□□□□ -0.45
LRTOMT-222	ENST00000615940	MTA3	Q9BTC8	594 aa		12.22	□□□□□ -0.45
LRTOMT-222	ENST00000615940	STRCP1	A6NGW2	1772 aa		12.22	□□□□□ -0.45
LRTOMT-222	ENST00000615940	RBM26	Q5T8P6	1007 aa	Known RBP	12.21	□□□□□ -0.45
LRTOMT-222	ENST00000615940	ARMCX6	Q7L4S7	300 aa		12.21	□□□□□ -0.45
LRTOMT-222	ENST00000615940	FOXD4L1	Q9NU39	408 aa		12.21	□□□□□ -0.45
LRTOMT-222	ENST00000615940	HDAC1	Q13547	482 aa	Predicted RBP	12.21	□□□□□ -0.46
LRTOMT-222	ENST00000615940	L3MBTL2	Q969R5	705 aa		12.21	□□□□□ -0.46
LRTOMT-222	ENST00000615940	SLC26A8	Q96RN1	970 aa		12.21	□□□□□ -0.46
LRTOMT-222	ENST00000615940	RBM27	Q9P2N5	1060 aa	Known RBP	12.2	□□□□□ -0.46
LRTOMT-222	ENST00000615940	RPGRIP1L	Q68CZ1	1315 aa		12.2	□□□□□ -0.46
LRTOMT-222	ENST00000615940	CHD2	O14647	1828 aa	Known RBP	12.2	□□□□□ -0.46
LRTOMT-222	ENST00000615940	PLEKHG1	Q9ULL1	1385 aa		12.19	□□□□□ -0.46
LRTOMT-222	ENST00000615940	ANP32C	O43423	234 aa		12.19	□□□□□ -0.46
LRTOMT-222	ENST00000615940	NBPF10	Q6P3W6	841 aa	Known RBP	12.19	□□□□□ -0.46
LRTOMT-222	ENST00000615940	SPATA32	Q96LK8	384 aa		12.19	□□□□□ -0.46
LRTOMT-222	ENST00000615940	SETBP1	Q9Y6X0	1596 aa		12.19	□□□□□ -0.46
LRTOMT-222	ENST00000615940	TESPA1	A2RU30	521 aa	Predicted RBP	12.19	□□□□□ -0.46
LRTOMT-222	ENST00000615940	HDGF	P51858	240 aa	Known RBP	12.19	□□□□□ -0.46
LRTOMT-222	ENST00000615940	NBPF6	Q5VWK0	638 aa		12.19	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 78 ms