RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 NEO1Q92859 1461 aa11.63□□□□□ -0.55
CLTCL1-208ENST00000615606 CT47B1P0C2W7 299 aaPredicted RBP11.63□□□□□ -0.55
CLTCL1-208ENST00000615606 AMOTL1Q8IY63 956 aa11.63□□□□□ -0.55
CLTCL1-208ENST00000615606 SPRYD3Q8NCJ5 442 aa11.63□□□□□ -0.55
CLTCL1-208ENST00000615606 NSD2O96028 1365 aa11.62□□□□□ -0.55
CLTCL1-208ENST00000615606 CHMP4CQ96CF2 233 aa11.62□□□□□ -0.55
CLTCL1-208ENST00000615606 ST18O60284 1047 aa11.62□□□□□ -0.55
CLTCL1-208ENST00000615606 NFE2L2Q16236 605 aa11.61□□□□□ -0.55
CLTCL1-208ENST00000615606 KIF3AQ9Y496 699 aa11.61□□□□□ -0.55
CLTCL1-208ENST00000615606 ATP7AQ04656 1500 aa11.61□□□□□ -0.55
CLTCL1-208ENST00000615606 GOLGA6L6A8MZA4 724 aa11.6□□□□□ -0.55
CLTCL1-208ENST00000615606 ERC2O15083 957 aa11.6□□□□□ -0.55
CLTCL1-208ENST00000615606 AMOTQ4VCS5 1084 aa11.6□□□□□ -0.55
CLTCL1-208ENST00000615606 GBP4Q96PP9 640 aa11.6□□□□□ -0.55
CLTCL1-208ENST00000615606 GNAT3A8MTJ3 354 aa11.6□□□□□ -0.55
CLTCL1-208ENST00000615606 PTMSP20962 102 aa11.6□□□□□ -0.55
CLTCL1-208ENST00000615606 TOM1O60784 492 aa11.6□□□□□ -0.55
CLTCL1-208ENST00000615606 KLHL34Q8N239 644 aa11.6□□□□□ -0.55
CLTCL1-208ENST00000615606 BTBD11A6QL63 1104 aa11.59□□□□□ -0.55
CLTCL1-208ENST00000615606 ACEP12821 1306 aa11.59□□□□□ -0.55
CLTCL1-208ENST00000615606 REC8O95072 547 aa11.59□□□□□ -0.55
CLTCL1-208ENST00000615606 FAM161AQ3B820 660 aa11.59□□□□□ -0.55
CLTCL1-208ENST00000615606 PANK1Q8TE04 598 aa11.59□□□□□ -0.55
CLTCL1-208ENST00000615606 CDCA7LQ96GN5 454 aa11.59□□□□□ -0.55
CLTCL1-208ENST00000615606 DNMT1P26358 1616 aaKnown RBP11.59□□□□□ -0.55
CLTCL1-208ENST00000615606 SLC4A2P04920 1241 aa11.58□□□□□ -0.56
CLTCL1-208ENST00000615606 TSR2Q969E8 191 aaKnown RBP11.58□□□□□ -0.56
CLTCL1-208ENST00000615606 TRIM34Q9BYJ4 488 aa11.58□□□□□ -0.56
CLTCL1-208ENST00000615606 ADAMTS2O95450 1211 aa11.58□□□□□ -0.56
CLTCL1-208ENST00000615606 PLCB2Q00722 1185 aa11.58□□□□□ -0.56
CLTCL1-208ENST00000615606 ZNF428Q96B54 188 aa11.58□□□□□ -0.56
CLTCL1-208ENST00000615606 TTC21BQ7Z4L5 1316 aa11.58□□□□□ -0.56
CLTCL1-208ENST00000615606 WWC1Q8IX03 1113 aa11.57□□□□□ -0.56
CLTCL1-208ENST00000615606 NPHP3Q7Z494 1330 aa11.57□□□□□ -0.56
CLTCL1-208ENST00000615606 NRDCO43847 1150 aa11.57□□□□□ -0.56
CLTCL1-208ENST00000615606 TMPOP42166 694 aaKnown RBP11.57□□□□□ -0.56
CLTCL1-208ENST00000615606 CCT4P50991 539 aaKnown RBP11.57□□□□□ -0.56
CLTCL1-208ENST00000615606 FBXW7Q969H0 707 aa11.57□□□□□ -0.56
CLTCL1-208ENST00000615606 NGLY1Q96IV0 654 aa11.57□□□□□ -0.56
CLTCL1-208ENST00000615606 NEUROD6Q96NK8 337 aa11.57□□□□□ -0.56
CLTCL1-208ENST00000615606 RBM19Q9Y4C8 960 aaKnown RBP11.57□□□□□ -0.56
CLTCL1-208ENST00000615606 TTC21AQ8NDW8 1320 aa11.57□□□□□ -0.56
CLTCL1-208ENST00000615606 CCDC34Q96HJ3 373 aa11.57□□□□□ -0.56
CLTCL1-208ENST00000615606 ZKSCAN1P17029 563 aaPredicted RBP11.57□□□□□ -0.56
CLTCL1-208ENST00000615606 CFAP74Q9C0B2 1584 aa11.56□□□□□ -0.56
CLTCL1-208ENST00000615606 RALGAPBQ86X10 1494 aa11.56□□□□□ -0.56
CLTCL1-208ENST00000615606 ADGRL2O95490 1459 aa11.56□□□□□ -0.56
CLTCL1-208ENST00000615606 SYNE3Q6ZMZ3 975 aa11.56□□□□□ -0.56
CLTCL1-208ENST00000615606 EMILIN1Q9Y6C2 1016 aa11.56□□□□□ -0.56
CLTCL1-208ENST00000615606 DCAF8L1A6NGE4 600 aa11.56□□□□□ -0.56
CLTCL1-208ENST00000615606 FAM177BA6PVY3 158 aa11.56□□□□□ -0.56
CLTCL1-208ENST00000615606 PDE3AQ14432 1141 aa11.56□□□□□ -0.56
CLTCL1-208ENST00000615606 UHRF1BP1Q6BDS2 1440 aa11.56□□□□□ -0.56
CLTCL1-208ENST00000615606 PRAG1Q86YV5 1406 aa11.55□□□□□ -0.56
CLTCL1-208ENST00000615606 ANKRD36BQ8N2N9 1353 aa11.55□□□□□ -0.56
CLTCL1-208ENST00000615606 APPP05067 770 aa11.55□□□□□ -0.56
CLTCL1-208ENST00000615606 CLASRPQ8N2M8 674 aaKnown RBP11.55□□□□□ -0.56
CLTCL1-208ENST00000615606 TBX22Q9Y458 520 aa11.55□□□□□ -0.56
CLTCL1-208ENST00000615606 NOL8Q76FK4 1167 aaKnown RBP11.55□□□□□ -0.56
CLTCL1-208ENST00000615606 SRCIN1Q9C0H9 1055 aa11.55□□□□□ -0.56
CLTCL1-208ENST00000615606 TMOD3Q9NYL9 352 aa11.55□□□□□ -0.56
CLTCL1-208ENST00000615606 ABCC11Q96J66 1382 aa11.55□□□□□ -0.56
CLTCL1-208ENST00000615606 UBAP1LF5GYI3 381 aa11.55□□□□□ -0.56
CLTCL1-208ENST00000615606 STARD3NLO95772 234 aa11.55□□□□□ -0.56
CLTCL1-208ENST00000615606 GNAI2P04899 355 aa11.55□□□□□ -0.56
CLTCL1-208ENST00000615606 CSPP1Q1MSJ5 1256 aa11.55□□□□□ -0.56
CLTCL1-208ENST00000615606 RNF20Q5VTR2 975 aa11.55□□□□□ -0.56
CLTCL1-208ENST00000615606 ERC1Q8IUD2 1116 aa11.55□□□□□ -0.56
CLTCL1-208ENST00000615606 C19orf44Q9H6X5 657 aa11.55□□□□□ -0.56
CLTCL1-208ENST00000615606 ZFYVE16Q7Z3T8 1539 aa11.54□□□□□ -0.56
CLTCL1-208ENST00000615606 C11orf95C9JLR9 678 aaPredicted RBP11.54□□□□□ -0.56
CLTCL1-208ENST00000615606 CPLX2Q6PUV4 134 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-208ENST00000615606 NOB1Q9ULX3 412 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-208ENST00000615606 SURF6O75683 361 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-208ENST00000615606 SLKQ9H2G2 1235 aaPredicted RBP11.54□□□□□ -0.56
CLTCL1-208ENST00000615606 EIF2AK4Q9P2K8 1649 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-208ENST00000615606 DISP3Q9P2K9 1392 aa11.54□□□□□ -0.56
CLTCL1-208ENST00000615606 ABCA8O94911 1581 aa11.54□□□□□ -0.56
CLTCL1-208ENST00000615606 HSPA2P54652 639 aa11.54□□□□□ -0.56
CLTCL1-208ENST00000615606 AKAP17AQ02040 695 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-208ENST00000615606 PUS7Q96PZ0 661 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-208ENST00000615606 NCKAP5LQ9HCH0 1330 aa11.54□□□□□ -0.56
CLTCL1-208ENST00000615606 MAPKBP1O60336 1514 aa11.54□□□□□ -0.56
CLTCL1-208ENST00000615606 LNPKQ9C0E8 428 aa11.54□□□□□ -0.56
CLTCL1-208ENST00000615606 MYL6BP14649 208 aa11.53□□□□□ -0.56
CLTCL1-208ENST00000615606 TRDNQ13061 729 aa11.53□□□□□ -0.56
CLTCL1-208ENST00000615606 EXOC5O00471 708 aa11.53□□□□□ -0.56
CLTCL1-208ENST00000615606 INTS3Q68E01 1043 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-208ENST00000615606 MAST1Q9Y2H9 1570 aa11.52□□□□□ -0.56
CLTCL1-208ENST00000615606 DNTTIP2Q5QJE6 756 aaKnown RBP11.52□□□□□ -0.56
CLTCL1-208ENST00000615606 PPIP5K1Q6PFW1 1433 aa11.52□□□□□ -0.57
CLTCL1-208ENST00000615606 TAF7Q15545 349 aaPredicted RBP11.52□□□□□ -0.57
CLTCL1-208ENST00000615606 USHBP1Q8N6Y0 703 aa11.52□□□□□ -0.57
CLTCL1-208ENST00000615606 SYAP1Q96A49 352 aaPredicted RBP11.52□□□□□ -0.57
CLTCL1-208ENST00000615606 CHD1O14646 1710 aa11.52□□□□□ -0.57
CLTCL1-208ENST00000615606 PDE4AP27815 886 aa11.51□□□□□ -0.57
CLTCL1-208ENST00000615606 IFT57Q9NWB7 429 aa11.51□□□□□ -0.57
CLTCL1-208ENST00000615606 ATF7IPQ6VMQ6 1270 aa11.51□□□□□ -0.57
CLTCL1-208ENST00000615606 CNNM1Q9NRU3 951 aa11.51□□□□□ -0.57
CLTCL1-208ENST00000615606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms