RNA–Protein interactions for RNA: ENST00000615301.4

SHTN1-207, Transcript of shootin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHTN1, Length 6,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-207ENST00000615301 PSMA5P28066 241 aa11.78□□□□□ -0.52
SHTN1-207ENST00000615301 RABEP1Q15276 862 aa11.78□□□□□ -0.52
SHTN1-207ENST00000615301 ESPNB1AK53 854 aa11.78□□□□□ -0.52
SHTN1-207ENST00000615301 C11orf95C9JLR9 678 aaPredicted RBP11.78□□□□□ -0.52
SHTN1-207ENST00000615301 STK38Q15208 465 aa11.77□□□□□ -0.52
SHTN1-207ENST00000615301 NOB1Q9ULX3 412 aaKnown RBP11.77□□□□□ -0.52
SHTN1-207ENST00000615301 SERPINC1P01008 464 aa11.77□□□□□ -0.52
SHTN1-207ENST00000615301 CT47B1P0C2W7 299 aaPredicted RBP11.77□□□□□ -0.53
SHTN1-207ENST00000615301 CCDC184Q52MB2 194 aa11.77□□□□□ -0.53
SHTN1-207ENST00000615301 CLASRPQ8N2M8 674 aaKnown RBP11.77□□□□□ -0.53
SHTN1-207ENST00000615301 ERCC4Q92889 916 aaPredicted RBP11.77□□□□□ -0.53
SHTN1-207ENST00000615301 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.77□□□□□ -0.533e-6■■■■■ 67.1
SHTN1-207ENST00000615301 LETM1O95202 739 aaPredicted RBP11.76□□□□□ -0.53
SHTN1-207ENST00000615301 FAM193AP78312 1265 aa11.76□□□□□ -0.53
SHTN1-207ENST00000615301 NINLQ9Y2I6 1382 aa11.76□□□□□ -0.53
SHTN1-207ENST00000615301 DCTN1Q14203 1278 aa11.75□□□□□ -0.53
SHTN1-207ENST00000615301 FILIP1Q7Z7B0 1213 aa11.75□□□□□ -0.53
SHTN1-207ENST00000615301 TNMDQ9H2S6 317 aa11.75□□□□□ -0.53
SHTN1-207ENST00000615301 PPP2R1AP30153 589 aa11.75□□□□□ -0.53
SHTN1-207ENST00000615301 K7ELQ4 463 aaPredicted RBP11.75□□□□□ -0.53
SHTN1-207ENST00000615301 PRKAR2BP31323 418 aa11.75□□□□□ -0.53
SHTN1-207ENST00000615301 CENPHQ9H3R5 247 aa11.75□□□□□ -0.53
SHTN1-207ENST00000615301 CCDC192P0DO97 292 aa11.75□□□□□ -0.53
SHTN1-207ENST00000615301 MCM4P33991 863 aa11.75□□□□□ -0.53
SHTN1-207ENST00000615301 PODXL2Q9NZ53 605 aa11.75□□□□□ -0.53
SHTN1-207ENST00000615301 ME1P48163 572 aa11.74□□□□□ -0.53
SHTN1-207ENST00000615301 JPH4Q96JJ6 628 aa11.74□□□□□ -0.53
SHTN1-207ENST00000615301 BRMS1Q9HCU9 246 aa11.74□□□□□ -0.53
SHTN1-207ENST00000615301 PSME1Q06323 249 aa11.74□□□□□ -0.53
SHTN1-207ENST00000615301 UACAQ9BZF9 1416 aa11.74□□□□□ -0.53
SHTN1-207ENST00000615301 TWISTNBQ3B726 338 aaPredicted RBP11.73□□□□□ -0.53
SHTN1-207ENST00000615301 FILIP1LQ4L180 1135 aa11.73□□□□□ -0.53
SHTN1-207ENST00000615301 SIL1Q9H173 461 aa11.73□□□□□ -0.53
SHTN1-207ENST00000615301 BRD4O60885 1362 aaPredicted RBP11.73□□□□□ -0.53
SHTN1-207ENST00000615301 SMARCE1Q969G3 411 aa11.73□□□□□ -0.53
SHTN1-207ENST00000615301 IBSPP21815 317 aaPredicted RBP11.73□□□□□ -0.53
SHTN1-207ENST00000615301 CNKSR2Q8WXI2 1034 aa11.73□□□□□ -0.53
SHTN1-207ENST00000615301 SYCE3A1L190 88 aa11.72□□□□□ -0.53
SHTN1-207ENST00000615301 PDCP20941 246 aa11.72□□□□□ -0.53
SHTN1-207ENST00000615301 NLRP2Q9NX02 1062 aa11.72□□□□□ -0.53
SHTN1-207ENST00000615301 CBX1P83916 185 aa11.72□□□□□ -0.53
SHTN1-207ENST00000615301 XBP1P17861 261 aa11.72□□□□□ -0.53
SHTN1-207ENST00000615301 IKQ13123 557 aaPredicted RBP11.72□□□□□ -0.53
SHTN1-207ENST00000615301 GNAI3P08754 354 aa11.71□□□□□ -0.53
SHTN1-207ENST00000615301 TRERF1Q96PN7 1200 aa11.71□□□□□ -0.53
SHTN1-207ENST00000615301 MAGEC2Q9UBF1 373 aaPredicted RBP11.71□□□□□ -0.53
SHTN1-207ENST00000615301 LARP1BQ659C4 914 aaKnown RBP11.71□□□□□ -0.53
SHTN1-207ENST00000615301 AAMPQ13685 434 aa11.71□□□□□ -0.54
SHTN1-207ENST00000615301 RAPGEF4Q8WZA2 1011 aa11.71□□□□□ -0.54
SHTN1-207ENST00000615301 CYP46A1Q9Y6A2 500 aa11.71□□□□□ -0.54
SHTN1-207ENST00000615301 SLC4A2P04920 1241 aa11.71□□□□□ -0.54
SHTN1-207ENST00000615301 ZNF396Q96N95 335 aaPredicted RBP11.71□□□□□ -0.54
SHTN1-207ENST00000615301 MCM2P49736 904 aa11.71□□□□□ -0.54
SHTN1-207ENST00000615301 CAMK4Q16566 473 aa11.71□□□□□ -0.54
SHTN1-207ENST00000615301 NEFHP12036 1026 aa11.7□□□□□ -0.54
SHTN1-207ENST00000615301 TAX1BP1Q86VP1 789 aa11.7□□□□□ -0.54
SHTN1-207ENST00000615301 RBM33Q96EV2 1170 aaKnown RBP11.7□□□□□ -0.54
SHTN1-207ENST00000615301 NBPF1Q3BBV0 1214 aa11.7□□□□□ -0.54
SHTN1-207ENST00000615301 PPFIBP1Q86W92 1011 aa11.7□□□□□ -0.54
SHTN1-207ENST00000615301 WDR33Q9C0J8 1336 aaKnown RBP11.7□□□□□ -0.54
SHTN1-207ENST00000615301 CCDC102AQ96A19 550 aa11.7□□□□□ -0.54
SHTN1-207ENST00000615301 GCC1Q96CN9 775 aa11.7□□□□□ -0.54
SHTN1-207ENST00000615301 CCP110O43303 1012 aa11.69□□□□□ -0.54
SHTN1-207ENST00000615301 RRP9O43818 475 aaKnown RBP11.69□□□□□ -0.54
SHTN1-207ENST00000615301 PDE3AQ14432 1141 aa11.69□□□□□ -0.54
SHTN1-207ENST00000615301 CFAP70Q5T0N1 1121 aa11.69□□□□□ -0.54
SHTN1-207ENST00000615301 NACADO15069 1562 aa11.69□□□□□ -0.54
SHTN1-207ENST00000615301 KIAA0754O94854 1291 aa11.69□□□□□ -0.54
SHTN1-207ENST00000615301 KRT85P78386 507 aa11.69□□□□□ -0.54
SHTN1-207ENST00000615301 XPCQ01831 940 aaPredicted RBP11.69□□□□□ -0.54
SHTN1-207ENST00000615301 FERMT3Q86UX7 667 aa11.69□□□□□ -0.54
SHTN1-207ENST00000615301 PDCL2Q8N4E4 241 aa11.69□□□□□ -0.54
SHTN1-207ENST00000615301 CDK5RAP3Q96JB5 506 aa11.69□□□□□ -0.54
SHTN1-207ENST00000615301 GNAI2P04899 355 aa11.69□□□□□ -0.54
SHTN1-207ENST00000615301 SART3Q15020 963 aaKnown RBP11.69□□□□□ -0.54
SHTN1-207ENST00000615301 ZHX3Q9H4I2 956 aa11.69□□□□□ -0.54
SHTN1-207ENST00000615301 IL1RAPL2Q9NP60 686 aa11.69□□□□□ -0.54
SHTN1-207ENST00000615301 ANKRD62A6NC57 917 aa11.69□□□□□ -0.54
SHTN1-207ENST00000615301 NLRP6P59044 892 aa11.69□□□□□ -0.54
SHTN1-207ENST00000615301 CCDC181Q5TID7 509 aa11.69□□□□□ -0.54
SHTN1-207ENST00000615301 CCDC30Q5VVM6 783 aa11.68□□□□□ -0.54
SHTN1-207ENST00000615301 DEF6Q9H4E7 631 aa11.68□□□□□ -0.54
SHTN1-207ENST00000615301 KRT18P05783 430 aaKnown RBP11.68□□□□□ -0.54
SHTN1-207ENST00000615301 CWC22Q9HCG8 908 aaKnown RBP11.68□□□□□ -0.54
SHTN1-207ENST00000615301 SPATA32Q96LK8 384 aa11.68□□□□□ -0.54
SHTN1-207ENST00000615301 TANGO6Q9C0B7 1094 aa11.68□□□□□ -0.54
SHTN1-207ENST00000615301 LRRFIP2Q9Y608 721 aaKnown RBP11.68□□□□□ -0.54
SHTN1-207ENST00000615301 CHD1LQ86WJ1 897 aa11.68□□□□□ -0.54
SHTN1-207ENST00000615301 TBC1D2BQ9UPU7 963 aa11.68□□□□□ -0.54
SHTN1-207ENST00000615301 ZNHIT6Q9NWK9 470 aaKnown RBP11.68□□□□□ -0.54
SHTN1-207ENST00000615301 CWC27Q6UX04 472 aaKnown RBP11.67□□□□□ -0.54
SHTN1-207ENST00000615301 DDX54Q8TDD1 881 aaKnown RBP11.67□□□□□ -0.54
SHTN1-207ENST00000615301 ZSCAN30Q86W11 494 aa11.67□□□□□ -0.54
SHTN1-207ENST00000615301 DDX11Q96FC9 970 aa11.67□□□□□ -0.54
SHTN1-207ENST00000615301 NUP62CLQ9H1M0 184 aa11.67□□□□□ -0.54
SHTN1-207ENST00000615301 GOLGA6L10A6NI86 522 aa11.67□□□□□ -0.54
SHTN1-207ENST00000615301 JAKMIP1Q96N16 626 aaKnown RBP11.67□□□□□ -0.54
SHTN1-207ENST00000615301 TAF3Q5VWG9 929 aa11.67□□□□□ -0.54
SHTN1-207ENST00000615301 NUP133Q8WUM0 1156 aa11.67□□□□□ -0.54
SHTN1-207ENST00000615301 LRRCC1Q9C099 1032 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms