RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 ONECUT3O60422 494 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-218ENST00000614502 NGDNQ8NEJ9 315 aaKnown RBP17.57■□□□□ 0.4
PDLIM2-218ENST00000614502 COL14A1Q05707 1796 aaKnown RBP17.57■□□□□ 0.4
PDLIM2-218ENST00000614502 KRT27Q7Z3Y8 459 aa17.55■□□□□ 0.4
PDLIM2-218ENST00000614502 BTG4Q9NY30 223 aa17.54■□□□□ 0.4
PDLIM2-218ENST00000614502 ATP7BP35670 1465 aa17.53■□□□□ 0.4
PDLIM2-218ENST00000614502 A0A0G2JS52 829 aa17.53■□□□□ 0.4
PDLIM2-218ENST00000614502 MYT1Q01538 1121 aa17.53■□□□□ 0.4
PDLIM2-218ENST00000614502 FAM98CQ17RN3 349 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-218ENST00000614502 NUDT16Q96DE0 195 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-218ENST00000614502 PAK3O75914 559 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-218ENST00000614502 SF3B2Q13435 895 aaKnown RBP17.51■□□□□ 0.39
PDLIM2-218ENST00000614502 CDK19Q9BWU1 502 aa17.51■□□□□ 0.39
PDLIM2-218ENST00000614502 TOPAZ1Q8N9V7 1692 aa17.51■□□□□ 0.39
PDLIM2-218ENST00000614502 PHRF1Q9P1Y6 1649 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-218ENST00000614502 FAM182BQ5T319 152 aa17.5■□□□□ 0.39
PDLIM2-218ENST00000614502 CCDC61Q9Y6R9 512 aa17.5■□□□□ 0.39
PDLIM2-218ENST00000614502 THSD7AQ9UPZ6 1657 aa17.5■□□□□ 0.39
PDLIM2-218ENST00000614502 RGPD1P0DJD0 1748 aa17.48■□□□□ 0.39
PDLIM2-218ENST00000614502 SPATA31A5Q5VU36 1347 aa17.47■□□□□ 0.39
PDLIM2-218ENST00000614502 SPATA31A7Q8IWB4 1347 aa17.47■□□□□ 0.39
PDLIM2-218ENST00000614502 CENPJQ9HC77 1338 aaPredicted RBP17.47■□□□□ 0.39
PDLIM2-218ENST00000614502 LRP5O75197 1615 aa17.47■□□□□ 0.39
PDLIM2-218ENST00000614502 TNS1Q9HBL0 1735 aaKnown RBP17.47■□□□□ 0.39
PDLIM2-218ENST00000614502 NBPF1Q3BBV0 1214 aa17.47■□□□□ 0.39
PDLIM2-218ENST00000614502 POLR3AO14802 1390 aaPredicted RBP17.47■□□□□ 0.39
PDLIM2-218ENST00000614502 QRICH2Q9H0J4 1663 aa17.46■□□□□ 0.39
PDLIM2-218ENST00000614502 PLEKHG3A1L390 1219 aa17.46■□□□□ 0.39
PDLIM2-218ENST00000614502 PSDA5PKW4 1024 aaPredicted RBP17.46■□□□□ 0.39
PDLIM2-218ENST00000614502 PRDM11Q9NQV5 511 aa17.46■□□□□ 0.39
PDLIM2-218ENST00000614502 KIAA0232Q92628 1395 aa17.45■□□□□ 0.38
PDLIM2-218ENST00000614502 CHRNA2Q15822 529 aa17.45■□□□□ 0.38
PDLIM2-218ENST00000614502 ACEP12821 1306 aa17.45■□□□□ 0.38
PDLIM2-218ENST00000614502 SRPK2P78362 688 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-218ENST00000614502 NBPF8Q3BBV2 869 aa17.44■□□□□ 0.38
PDLIM2-218ENST00000614502 NUTM2GQ5VZR2 741 aa17.44■□□□□ 0.38
PDLIM2-218ENST00000614502 TRPM1Q7Z4N2 1603 aa17.43■□□□□ 0.38
PDLIM2-218ENST00000614502 BRD4O60885 1362 aaPredicted RBP17.43■□□□□ 0.38
PDLIM2-218ENST00000614502 BAG6P46379 1132 aa17.43■□□□□ 0.38
PDLIM2-218ENST00000614502 EN1Q05925 392 aaPredicted RBP17.43■□□□□ 0.38
PDLIM2-218ENST00000614502 L3MBTL2Q969R5 705 aa17.43■□□□□ 0.38
PDLIM2-218ENST00000614502 NRKQ7Z2Y5 1582 aa17.41■□□□□ 0.38
PDLIM2-218ENST00000614502 PPIP5K1Q6PFW1 1433 aa17.41■□□□□ 0.38
PDLIM2-218ENST00000614502 ZC3H6P61129 1189 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-218ENST00000614502 STRN4Q9NRL3 753 aa17.41■□□□□ 0.38
PDLIM2-218ENST00000614502 SPATA31A1Q5TZJ5 1347 aa17.41■□□□□ 0.38
PDLIM2-218ENST00000614502 TRIM26Q12899 539 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-218ENST00000614502 ABTB2Q8N961 1025 aa17.39■□□□□ 0.37
PDLIM2-218ENST00000614502 EVC2Q86UK5 1308 aa17.39■□□□□ 0.37
PDLIM2-218ENST00000614502 NEUROD1Q13562 356 aa17.38■□□□□ 0.37
PDLIM2-218ENST00000614502 NLRP13Q86W25 1043 aa17.38■□□□□ 0.37
PDLIM2-218ENST00000614502 SIN3AQ96ST3 1273 aa17.38■□□□□ 0.37
PDLIM2-218ENST00000614502 LMO7Q8WWI1 1683 aa17.38■□□□□ 0.37
PDLIM2-218ENST00000614502 CAMTA1Q9Y6Y1 1673 aa17.38■□□□□ 0.37
PDLIM2-218ENST00000614502 ROCK2O75116 1388 aaKnown RBP17.38■□□□□ 0.37
PDLIM2-218ENST00000614502 DISP2A7MBM2 1401 aa17.38■□□□□ 0.37
PDLIM2-218ENST00000614502 CABP2Q9NPB3 220 aa17.37■□□□□ 0.37
PDLIM2-218ENST00000614502 USP35Q9P2H5 1018 aa17.37■□□□□ 0.37
PDLIM2-218ENST00000614502 EZH2Q15910 746 aaKnown RBP17.36■□□□□ 0.37
PDLIM2-218ENST00000614502 SSH2Q76I76 1423 aa17.36■□□□□ 0.37
PDLIM2-218ENST00000614502 TRIM37O94972 964 aa17.35■□□□□ 0.37
PDLIM2-218ENST00000614502 R3HDM1Q15032 1099 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-218ENST00000614502 CPDO75976 1380 aa17.34■□□□□ 0.37
PDLIM2-218ENST00000614502 USP19O94966 1318 aa17.34■□□□□ 0.37
PDLIM2-218ENST00000614502 EVA1CP58658 441 aa17.34■□□□□ 0.37
PDLIM2-218ENST00000614502 LARP1Q6PKG0 1096 aaKnown RBP17.33■□□□□ 0.36
PDLIM2-218ENST00000614502 CABP1Q9NZU7 370 aa17.33■□□□□ 0.36
PDLIM2-218ENST00000614502 RREB1Q92766 1687 aa17.32■□□□□ 0.36
PDLIM2-218ENST00000614502 USP6P35125 1406 aa17.32■□□□□ 0.36
PDLIM2-218ENST00000614502 CAMKK2Q96RR4 588 aa17.32■□□□□ 0.36
PDLIM2-218ENST00000614502 ZNF692Q9BU19 519 aaPredicted RBP17.32■□□□□ 0.36
PDLIM2-218ENST00000614502 AKAP12Q02952 1782 aa17.31■□□□□ 0.36
PDLIM2-218ENST00000614502 NUP188Q5SRE5 1749 aa17.31■□□□□ 0.36
PDLIM2-218ENST00000614502 FAM196AQ6ZSG2 479 aa17.31■□□□□ 0.36
PDLIM2-218ENST00000614502 GCP02774 474 aa17.3■□□□□ 0.36
PDLIM2-218ENST00000614502 BARGINQ6ZT62 677 aa17.3■□□□□ 0.36
PDLIM2-218ENST00000614502 PARP4Q9UKK3 1724 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-218ENST00000614502 APBA3O96018 575 aa17.29■□□□□ 0.36
PDLIM2-218ENST00000614502 NLRP6P59044 892 aa17.29■□□□□ 0.36
PDLIM2-218ENST00000614502 TCP11L2Q8N4U5 519 aa17.28■□□□□ 0.36
PDLIM2-218ENST00000614502 THRAP3Q9Y2W1 955 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-218ENST00000614502 COL5A2P05997 1499 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-218ENST00000614502 TONSLQ96HA7 1378 aa17.28■□□□□ 0.36
PDLIM2-218ENST00000614502 SBNO2Q9Y2G9 1366 aa17.28■□□□□ 0.36
PDLIM2-218ENST00000614502 PDE3BQ13370 1112 aa17.27■□□□□ 0.36
PDLIM2-218ENST00000614502 SLIT3O75094 1523 aa17.26■□□□□ 0.35
PDLIM2-218ENST00000614502 PIK3C2AO00443 1686 aa17.26■□□□□ 0.35
PDLIM2-218ENST00000614502 SBF2Q86WG5 1849 aa17.26■□□□□ 0.35
PDLIM2-218ENST00000614502 COL18A1P39060 1754 aa17.25■□□□□ 0.35
PDLIM2-218ENST00000614502 RGPD5Q99666 1765 aa17.25■□□□□ 0.35
PDLIM2-218ENST00000614502 TTC21AQ8NDW8 1320 aa17.25■□□□□ 0.35
PDLIM2-218ENST00000614502 PEAK1Q9H792 1746 aa17.25■□□□□ 0.35
PDLIM2-218ENST00000614502 KCNH5Q8NCM2 988 aa17.25■□□□□ 0.35
PDLIM2-218ENST00000614502 CARD11Q9BXL7 1154 aa17.25■□□□□ 0.35
PDLIM2-218ENST00000614502 LRRC37A3O60309 1634 aa17.25■□□□□ 0.35
PDLIM2-218ENST00000614502 WNK3Q9BYP7 1800 aa17.24■□□□□ 0.35
PDLIM2-218ENST00000614502 ZBTB7CA1YPR0 619 aa17.24■□□□□ 0.35
PDLIM2-218ENST00000614502 C11orf95C9JLR9 678 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-218ENST00000614502 AATKQ6ZMQ8 1374 aa17.24■□□□□ 0.35
PDLIM2-218ENST00000614502 PARD3Q8TEW0 1356 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms