RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 C1orf167Q5SNV9 1468 aa23.67■■□□□ 1.38
GEN1-208ENST00000614478 NUTM2FA1L443 756 aa23.66■■□□□ 1.38
GEN1-208ENST00000614478 WDR43Q15061 677 aaKnown RBP eCLIP23.66■■□□□ 1.38
GEN1-208ENST00000614478 ADAMTS8Q9UP79 889 aa23.66■■□□□ 1.38
GEN1-208ENST00000614478 ANKRD26Q9UPS8 1709 aa23.65■■□□□ 1.38
GEN1-208ENST00000614478 SENP3-EIF4A1A0A087X0R7 540 aa23.65■■□□□ 1.38
GEN1-208ENST00000614478 POLR3AO14802 1390 aaPredicted RBP23.65■■□□□ 1.38
GEN1-208ENST00000614478 KIF20BQ96Q89 1820 aa23.64■■□□□ 1.38
GEN1-208ENST00000614478 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.64■■□□□ 1.38
GEN1-208ENST00000614478 BLMP54132 1417 aaPredicted RBP23.64■■□□□ 1.38
GEN1-208ENST00000614478 TOPAZ1Q8N9V7 1692 aa23.64■■□□□ 1.37
GEN1-208ENST00000614478 EDC4Q6P2E9 1401 aaKnown RBP23.64■■□□□ 1.37
GEN1-208ENST00000614478 ROBO1Q9Y6N7 1651 aa23.63■■□□□ 1.37
GEN1-208ENST00000614478 AKAP12Q02952 1782 aa23.63■■□□□ 1.37
GEN1-208ENST00000614478 ZNF692Q9BU19 519 aaPredicted RBP23.62■■□□□ 1.37
GEN1-208ENST00000614478 MTHFSP49914 203 aa23.62■■□□□ 1.37
GEN1-208ENST00000614478 MON2Q7Z3U7 1717 aa23.61■■□□□ 1.37
GEN1-208ENST00000614478 PLEKHG3A1L390 1219 aa23.61■■□□□ 1.37
GEN1-208ENST00000614478 KIF1AQ12756 1690 aa23.61■■□□□ 1.37
GEN1-208ENST00000614478 ACEP12821 1306 aa23.59■■□□□ 1.37
GEN1-208ENST00000614478 ESCO1Q5FWF5 840 aa23.58■■□□□ 1.37
GEN1-208ENST00000614478 PIP4K2BP78356 416 aa23.58■■□□□ 1.36
GEN1-208ENST00000614478 BRINP3Q76B58 766 aa23.57■■□□□ 1.36
GEN1-208ENST00000614478 ORAI2Q96SN7 254 aa23.57■■□□□ 1.36
GEN1-208ENST00000614478 CFAP53Q96M91 514 aa23.56■■□□□ 1.36
GEN1-208ENST00000614478 NHSL1Q5SYE7 1610 aa23.55■■□□□ 1.36
GEN1-208ENST00000614478 NME9Q86XW9 330 aa23.55■■□□□ 1.36
GEN1-208ENST00000614478 SALL2Q9Y467 1007 aaPredicted RBP23.55■■□□□ 1.36
GEN1-208ENST00000614478 PHF8Q9UPP1 1060 aa23.54■■□□□ 1.36
GEN1-208ENST00000614478 SHPRHQ149N8 1683 aa23.53■■□□□ 1.36
GEN1-208ENST00000614478 PMFBP1Q8TBY8 1022 aa23.53■■□□□ 1.36
GEN1-208ENST00000614478 FBXO41Q8TF61 875 aa23.52■■□□□ 1.36
GEN1-208ENST00000614478 SUPT16HQ9Y5B9 1047 aaKnown RBP23.52■■□□□ 1.36
GEN1-208ENST00000614478 USP6P35125 1406 aa23.52■■□□□ 1.35
GEN1-208ENST00000614478 AHDC1Q5TGY3 1603 aaPredicted RBP23.51■■□□□ 1.35
GEN1-208ENST00000614478 ZRANB1Q9UGI0 708 aa23.51■■□□□ 1.35
GEN1-208ENST00000614478 NRKQ7Z2Y5 1582 aa23.51■■□□□ 1.35
GEN1-208ENST00000614478 TTC21BQ7Z4L5 1316 aa23.5■■□□□ 1.35
GEN1-208ENST00000614478 NGDNQ8NEJ9 315 aaKnown RBP23.49■■□□□ 1.35
GEN1-208ENST00000614478 SMG6Q86US8 1419 aaKnown RBP23.49■■□□□ 1.35
GEN1-208ENST00000614478 COG3Q96JB2 828 aa23.49■■□□□ 1.35
GEN1-208ENST00000614478 NPHP3Q7Z494 1330 aa23.48■■□□□ 1.35
GEN1-208ENST00000614478 PHLPP1O60346 1717 aa23.48■■□□□ 1.35
GEN1-208ENST00000614478 NEFLP07196 543 aa23.48■■□□□ 1.35
GEN1-208ENST00000614478 CCDC146Q8IYE0 955 aa23.48■■□□□ 1.35
GEN1-208ENST00000614478 FOXO3O43524 673 aa23.47■■□□□ 1.35
GEN1-208ENST00000614478 NUDCQ9Y266 331 aa23.47■■□□□ 1.35
GEN1-208ENST00000614478 SSH2Q76I76 1423 aa23.46■■□□□ 1.35
GEN1-208ENST00000614478 FBLN1P23142 703 aa23.46■■□□□ 1.35
GEN1-208ENST00000614478 PDE3BQ13370 1112 aa23.45■■□□□ 1.34
GEN1-208ENST00000614478 POLKQ9UBT6 870 aa23.45■■□□□ 1.34
GEN1-208ENST00000614478 MAP2P11137 1827 aaKnown RBP23.44■■□□□ 1.34
GEN1-208ENST00000614478 COL3A1P02461 1466 aaPredicted RBP23.44■■□□□ 1.34
GEN1-208ENST00000614478 PNPLA6Q8IY17 1366 aa23.43■■□□□ 1.34
GEN1-208ENST00000614478 PXDNQ92626 1479 aa23.43■■□□□ 1.34
GEN1-208ENST00000614478 COL16A1Q07092 1604 aaPredicted RBP23.43■■□□□ 1.34
GEN1-208ENST00000614478 AATKQ6ZMQ8 1374 aa23.42■■□□□ 1.34
GEN1-208ENST00000614478 APAF1O14727 1248 aa23.42■■□□□ 1.34
GEN1-208ENST00000614478 PSME1Q06323 249 aa23.42■■□□□ 1.34
GEN1-208ENST00000614478 DDX17Q92841 729 aaKnown RBP23.42■■□□□ 1.34
GEN1-208ENST00000614478 SOS2Q07890 1332 aaPredicted RBP23.42■■□□□ 1.34
GEN1-208ENST00000614478 TTC21AQ8NDW8 1320 aa23.42■■□□□ 1.34
GEN1-208ENST00000614478 TRPM3Q9HCF6 1732 aaPredicted RBP23.41■■□□□ 1.34
GEN1-208ENST00000614478 PPM1GO15355 546 aaPredicted RBP23.41■■□□□ 1.34
GEN1-208ENST00000614478 U2AF1L5P0DN76 240 aaPredicted RBP23.4■■□□□ 1.34
GEN1-208ENST00000614478 U2AF1Q01081 240 aaKnown RBP eCLIP23.4■■□□□ 1.34
GEN1-208ENST00000614478 OVOS2A0A0J9YW53 1432 aa23.39■■□□□ 1.34
GEN1-208ENST00000614478 OVOS2Q6IE36 1432 aa23.39■■□□□ 1.34
GEN1-208ENST00000614478 DIAPH1O60610 1272 aaKnown RBP23.39■■□□□ 1.34
GEN1-208ENST00000614478 KRT28Q7Z3Y7 464 aa23.39■■□□□ 1.34
GEN1-208ENST00000614478 FKBP8Q14318 412 aa23.39■■□□□ 1.33
GEN1-208ENST00000614478 RUNDC1Q96C34 613 aa23.39■■□□□ 1.33
GEN1-208ENST00000614478 EMILIN1Q9Y6C2 1016 aa23.39■■□□□ 1.33
GEN1-208ENST00000614478 XPCQ01831 940 aaPredicted RBP23.38■■□□□ 1.33
GEN1-208ENST00000614478 CDCA7LQ96GN5 454 aa23.38■■□□□ 1.33
GEN1-208ENST00000614478 U2SURPO15042 1029 aaKnown RBP23.37■■□□□ 1.33
GEN1-208ENST00000614478 SBNO1A3KN83 1393 aa23.36■■□□□ 1.33
GEN1-208ENST00000614478 ZNF521Q96K83 1311 aa23.36■■□□□ 1.33
GEN1-208ENST00000614478 HSPA1LP34931 641 aa23.36■■□□□ 1.33
GEN1-208ENST00000614478 RRS1Q15050 365 aaKnown RBP23.36■■□□□ 1.33
GEN1-208ENST00000614478 ERICH6BQ5W0A0 696 aa23.35■■□□□ 1.33
GEN1-208ENST00000614478 ALS2Q96Q42 1657 aa23.35■■□□□ 1.33
GEN1-208ENST00000614478 NGEFQ8N5V2 710 aa23.34■■□□□ 1.33
GEN1-208ENST00000614478 LRRC59Q96AG4 307 aaKnown RBP23.34■■□□□ 1.33
GEN1-208ENST00000614478 USP31Q70CQ4 1352 aa23.34■■□□□ 1.33
GEN1-208ENST00000614478 CDK12Q9NYV4 1490 aaPredicted RBP23.34■■□□□ 1.33
GEN1-208ENST00000614478 TNS3Q68CZ2 1445 aa23.33■■□□□ 1.32
GEN1-208ENST00000614478 PIK3C2AO00443 1686 aa23.32■■□□□ 1.32
GEN1-208ENST00000614478 TCP11L2Q8N4U5 519 aa23.32■■□□□ 1.32
GEN1-208ENST00000614478 SPATA31A3Q5VYP0 1347 aa23.31■■□□□ 1.32
GEN1-208ENST00000614478 PAK3O75914 559 aaPredicted RBP23.3■■□□□ 1.32
GEN1-208ENST00000614478 GOLGA2Q08379 1002 aa23.3■■□□□ 1.32
GEN1-208ENST00000614478 NLRP6P59044 892 aa23.29■■□□□ 1.32
GEN1-208ENST00000614478 ARHGEF10O15013 1369 aa23.29■■□□□ 1.32
GEN1-208ENST00000614478 ABTB2Q8N961 1025 aa23.28■■□□□ 1.32
GEN1-208ENST00000614478 PLEKHF1Q96S99 279 aa23.28■■□□□ 1.32
GEN1-208ENST00000614478 COL22A1Q8NFW1 1626 aaPredicted RBP23.28■■□□□ 1.32
GEN1-208ENST00000614478 IL13P35225 146 aa23.28■■□□□ 1.32
GEN1-208ENST00000614478 PELP1Q8IZL8 1130 aaKnown RBP23.28■■□□□ 1.32
GEN1-208ENST00000614478 RRP7AQ9Y3A4 280 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms