RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 DIP2AQ14689 1571 aa14.46□□□□□ -0.1
ATF3-211ENST00000613954 ZNF142P52746 1687 aaPredicted RBP14.45□□□□□ -0.1
ATF3-211ENST00000613954 CGNL1Q0VF96 1302 aa14.44□□□□□ -0.1
ATF3-211ENST00000613954 TBX22Q9Y458 520 aa14.44□□□□□ -0.1
ATF3-211ENST00000613954 TERF2IPQ9NYB0 399 aa14.43□□□□□ -0.1
ATF3-211ENST00000613954 NSD2O96028 1365 aa14.43□□□□□ -0.1
ATF3-211ENST00000613954 E9PSI1 815 aa14.42□□□□□ -0.1
ATF3-211ENST00000613954 ANO8Q9HCE9 1232 aaPredicted RBP14.42□□□□□ -0.1
ATF3-211ENST00000613954 A0A1W2PP64 1363 aa14.42□□□□□ -0.1
ATF3-211ENST00000613954 ROBO2Q9HCK4 1378 aa14.42□□□□□ -0.1
ATF3-211ENST00000613954 SLC26A8Q96RN1 970 aa14.42□□□□□ -0.1
ATF3-211ENST00000613954 WASLO00401 505 aaPredicted RBP14.41□□□□□ -0.1
ATF3-211ENST00000613954 SLC4A3P48751 1232 aa14.41□□□□□ -0.1
ATF3-211ENST00000613954 FRAT1Q92837 279 aaPredicted RBP14.41□□□□□ -0.1
ATF3-211ENST00000613954 RTN4Q9NQC3 1192 aaKnown RBP14.41□□□□□ -0.1
ATF3-211ENST00000613954 PTPRUQ92729 1446 aa14.41□□□□□ -0.1
ATF3-211ENST00000613954 CD163L1Q9NR16 1453 aa14.41□□□□□ -0.1
ATF3-211ENST00000613954 MORC1Q86VD1 984 aa14.41□□□□□ -0.1
ATF3-211ENST00000613954 HDGFL2Q7Z4V5 671 aaPredicted RBP14.4□□□□□ -0.1
ATF3-211ENST00000613954 ADGRB2O60241 1585 aa14.39□□□□□ -0.11
ATF3-211ENST00000613954 RGS3P49796 1198 aa14.39□□□□□ -0.11
ATF3-211ENST00000613954 PDE3AQ14432 1141 aa14.39□□□□□ -0.11
ATF3-211ENST00000613954 SETD1BQ9UPS6 1966 aaKnown RBP14.39□□□□□ -0.11
ATF3-211ENST00000613954 ATP7BP35670 1465 aa14.39□□□□□ -0.11
ATF3-211ENST00000613954 MAPK8IP3Q9UPT6 1336 aa14.39□□□□□ -0.11
ATF3-211ENST00000613954 CABP1Q9NZU7 370 aa14.39□□□□□ -0.11
ATF3-211ENST00000613954 AAMPQ13685 434 aa14.38□□□□□ -0.11
ATF3-211ENST00000613954 ANKLE2Q86XL3 938 aa14.38□□□□□ -0.11
ATF3-211ENST00000613954 PTCH1Q13635 1447 aa14.38□□□□□ -0.11
ATF3-211ENST00000613954 AMOTL2Q9Y2J4 779 aa14.37□□□□□ -0.11
ATF3-211ENST00000613954 PIK3R4Q99570 1358 aa14.37□□□□□ -0.11
ATF3-211ENST00000613954 BECN1Q14457 450 aa14.37□□□□□ -0.11
ATF3-211ENST00000613954 BRPF3Q9ULD4 1205 aa14.37□□□□□ -0.11
ATF3-211ENST00000613954 APAF1O14727 1248 aa14.36□□□□□ -0.11
ATF3-211ENST00000613954 XRN1Q8IZH2 1706 aaKnown RBP14.36□□□□□ -0.11
ATF3-211ENST00000613954 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.36□□□□□ -0.11
ATF3-211ENST00000613954 POLR3AO14802 1390 aaPredicted RBP14.36□□□□□ -0.11
ATF3-211ENST00000613954 PPIP5K1Q6PFW1 1433 aa14.35□□□□□ -0.11
ATF3-211ENST00000613954 FRAT2O75474 233 aaPredicted RBP14.35□□□□□ -0.11
ATF3-211ENST00000613954 NUDT16Q96DE0 195 aaKnown RBP14.35□□□□□ -0.11
ATF3-211ENST00000613954 CCDC146Q8IYE0 955 aa14.34□□□□□ -0.11
ATF3-211ENST00000613954 ANKRD26Q9UPS8 1709 aa14.34□□□□□ -0.11
ATF3-211ENST00000613954 CLUAP1Q96AJ1 413 aa14.34□□□□□ -0.11
ATF3-211ENST00000613954 CDC42BPGQ6DT37 1551 aa14.33□□□□□ -0.11
ATF3-211ENST00000613954 CPSF1Q10570 1443 aaKnown RBP14.33□□□□□ -0.12
ATF3-211ENST00000613954 BCAR3O75815 825 aa14.33□□□□□ -0.12
ATF3-211ENST00000613954 CCDC61Q9Y6R9 512 aa14.33□□□□□ -0.12
ATF3-211ENST00000613954 TNNT2P45379 298 aaPredicted RBP14.32□□□□□ -0.12
ATF3-211ENST00000613954 SPINK5Q9NQ38 1064 aaPredicted RBP14.32□□□□□ -0.12
ATF3-211ENST00000613954 KIF20BQ96Q89 1820 aa14.32□□□□□ -0.12
ATF3-211ENST00000613954 FYB1O15117 783 aa14.32□□□□□ -0.12
ATF3-211ENST00000613954 CANXP27824 592 aaKnown RBP14.31□□□□□ -0.12
ATF3-211ENST00000613954 PMFBP1Q8TBY8 1022 aa14.31□□□□□ -0.12
ATF3-211ENST00000613954 EDC4Q6P2E9 1401 aaKnown RBP14.31□□□□□ -0.12
ATF3-211ENST00000613954 IGHDP01880 384 aa14.31□□□□□ -0.12
ATF3-211ENST00000613954 GGNBP2Q9H3C7 697 aa14.31□□□□□ -0.12
ATF3-211ENST00000613954 USP19O94966 1318 aa14.3□□□□□ -0.12
ATF3-211ENST00000613954 PRR36Q9H6K5 1346 aa14.3□□□□□ -0.12
ATF3-211ENST00000613954 FAM43AQ8N2R8 423 aa14.3□□□□□ -0.12
ATF3-211ENST00000613954 CFAP53Q96M91 514 aa14.3□□□□□ -0.12
ATF3-211ENST00000613954 TOPAZ1Q8N9V7 1692 aa14.3□□□□□ -0.12
ATF3-211ENST00000613954 MTHFSP49914 203 aa14.29□□□□□ -0.12
ATF3-211ENST00000613954 UPF2Q9HAU5 1272 aaKnown RBP14.29□□□□□ -0.12
ATF3-211ENST00000613954 AKAP12Q02952 1782 aa14.29□□□□□ -0.12
ATF3-211ENST00000613954 ITSN1Q15811 1721 aa14.29□□□□□ -0.12
ATF3-211ENST00000613954 MON2Q7Z3U7 1717 aa14.29□□□□□ -0.12
ATF3-211ENST00000613954 NPHP4O75161 1426 aaPredicted RBP14.29□□□□□ -0.12
ATF3-211ENST00000613954 KCNA6P17658 529 aa14.29□□□□□ -0.12
ATF3-211ENST00000613954 WWC1Q8IX03 1113 aa14.28□□□□□ -0.12
ATF3-211ENST00000613954 ZNF692Q9BU19 519 aaPredicted RBP14.28□□□□□ -0.12
ATF3-211ENST00000613954 CHD2O14647 1828 aaKnown RBP14.28□□□□□ -0.12
ATF3-211ENST00000613954 SHPRHQ149N8 1683 aa14.28□□□□□ -0.12
ATF3-211ENST00000613954 NCKAP5LQ9HCH0 1330 aa14.27□□□□□ -0.12
ATF3-211ENST00000613954 PLEKHG3A1L390 1219 aa14.27□□□□□ -0.13
ATF3-211ENST00000613954 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.27□□□□□ -0.13
ATF3-211ENST00000613954 L1TD1Q5T7N2 865 aaKnown RBP14.26□□□□□ -0.13
ATF3-211ENST00000613954 COG6Q9Y2V7 657 aa14.25□□□□□ -0.13
ATF3-211ENST00000613954 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
ATF3-211ENST00000613954 WDR63Q8IWG1 891 aa14.24□□□□□ -0.13
ATF3-211ENST00000613954 RSPH6AQ9H0K4 717 aa14.24□□□□□ -0.13
ATF3-211ENST00000613954 ANKARQ7Z5J8 1434 aa14.24□□□□□ -0.13
ATF3-211ENST00000613954 PANK1Q8TE04 598 aa14.24□□□□□ -0.13
ATF3-211ENST00000613954 RUNDC1Q96C34 613 aa14.24□□□□□ -0.13
ATF3-211ENST00000613954 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
ATF3-211ENST00000613954 ACEP12821 1306 aa14.23□□□□□ -0.13
ATF3-211ENST00000613954 NRKQ7Z2Y5 1582 aa14.23□□□□□ -0.13
ATF3-211ENST00000613954 NUTM2FA1L443 756 aa14.22□□□□□ -0.13
ATF3-211ENST00000613954 RARSP54136 660 aaKnown RBP14.22□□□□□ -0.13
ATF3-211ENST00000613954 UBE2Q2Q8WVN8 375 aa14.22□□□□□ -0.13
ATF3-211ENST00000613954 RWDD1Q9H446 243 aaPredicted RBP14.22□□□□□ -0.13
ATF3-211ENST00000613954 FMN2Q9NZ56 1722 aa14.22□□□□□ -0.13
ATF3-211ENST00000613954 SEC24BO95487 1268 aa14.22□□□□□ -0.13
ATF3-211ENST00000613954 CCDC27Q2M243 656 aa14.22□□□□□ -0.13
ATF3-211ENST00000613954 NME9Q86XW9 330 aa14.22□□□□□ -0.13
ATF3-211ENST00000613954 TBC1D32Q96NH3 1257 aa14.22□□□□□ -0.13
ATF3-211ENST00000613954 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.22□□□□□ -0.13
ATF3-211ENST00000613954 COL3A1P02461 1466 aaPredicted RBP14.22□□□□□ -0.13
ATF3-211ENST00000613954 IQSEC2Q5JU85 1478 aa14.22□□□□□ -0.13
ATF3-211ENST00000613954 USP6P35125 1406 aa14.21□□□□□ -0.14
ATF3-211ENST00000613954 COG3Q96JB2 828 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms