RNA–Protein interactions for RNA: ENST00000613922.1

CCL3-204, Transcript of C-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-204ENST00000613922 PLEKHG3A1L390 1219 aa24.67■■□□□ 1.54
CCL3-204ENST00000613922 PLEKHG5O94827 1062 aa24.67■■□□□ 1.54
CCL3-204ENST00000613922 NRAPQ86VF7 1730 aa24.66■■□□□ 1.54
CCL3-204ENST00000613922 ATAD2Q6PL18 1390 aa24.66■■□□□ 1.54
CCL3-204ENST00000613922 COL14A1Q05707 1796 aaKnown RBP24.65■■□□□ 1.54
CCL3-204ENST00000613922 FAM83GA6ND36 823 aa24.65■■□□□ 1.54
CCL3-204ENST00000613922 ACEP12821 1306 aa24.63■■□□□ 1.53
CCL3-204ENST00000613922 PAK3O75914 559 aaPredicted RBP24.63■■□□□ 1.53
CCL3-204ENST00000613922 VPS72Q15906 364 aa24.63■■□□□ 1.53
CCL3-204ENST00000613922 EP400Q96L91 3159 aa24.62■■□□□ 1.53
CCL3-204ENST00000613922 PHRF1Q9P1Y6 1649 aaKnown RBP24.62■■□□□ 1.53
CCL3-204ENST00000613922 NBPF8Q3BBV2 869 aa24.62■■□□□ 1.53
CCL3-204ENST00000613922 BRWD3Q6RI45 1802 aa24.62■■□□□ 1.53
CCL3-204ENST00000613922 ROCK2O75116 1388 aaKnown RBP24.6■■□□□ 1.53
CCL3-204ENST00000613922 SRPK2P78362 688 aaKnown RBP24.6■■□□□ 1.53
CCL3-204ENST00000613922 PPIP5K1Q6PFW1 1433 aa24.6■■□□□ 1.53
CCL3-204ENST00000613922 CABP2Q9NPB3 220 aa24.59■■□□□ 1.53
CCL3-204ENST00000613922 TRIM26Q12899 539 aaPredicted RBP24.57■■□□□ 1.52
CCL3-204ENST00000613922 ONECUT3O60422 494 aaPredicted RBP24.55■■□□□ 1.52
CCL3-204ENST00000613922 BTG4Q9NY30 223 aa24.55■■□□□ 1.52
CCL3-204ENST00000613922 EVC2Q86UK5 1308 aa24.53■■□□□ 1.52
CCL3-204ENST00000613922 BRD4O60885 1362 aaPredicted RBP24.53■■□□□ 1.52
CCL3-204ENST00000613922 NRKQ7Z2Y5 1582 aa24.52■■□□□ 1.52
CCL3-204ENST00000613922 SEPT12Q8IYM1 358 aa24.52■■□□□ 1.52
CCL3-204ENST00000613922 CCDC9Q9Y3X0 531 aaKnown RBP24.52■■□□□ 1.52
CCL3-204ENST00000613922 NUTM2GQ5VZR2 741 aa24.51■■□□□ 1.51
CCL3-204ENST00000613922 PRDM11Q9NQV5 511 aa24.51■■□□□ 1.51
CCL3-204ENST00000613922 KIAA0232Q92628 1395 aa24.51■■□□□ 1.51
CCL3-204ENST00000613922 CABP1Q9NZU7 370 aa24.5■■□□□ 1.51
CCL3-204ENST00000613922 USP19O94966 1318 aa24.5■■□□□ 1.51
CCL3-204ENST00000613922 CCDC125Q86Z20 511 aa24.49■■□□□ 1.51
CCL3-204ENST00000613922 ABTB2Q8N961 1025 aa24.49■■□□□ 1.51
CCL3-204ENST00000613922 TONSLQ96HA7 1378 aa24.49■■□□□ 1.51
CCL3-204ENST00000613922 USP6P35125 1406 aa24.49■■□□□ 1.51
CCL3-204ENST00000613922 AKAP12Q02952 1782 aa24.48■■□□□ 1.51
CCL3-204ENST00000613922 SBNO2Q9Y2G9 1366 aa24.47■■□□□ 1.51
CCL3-204ENST00000613922 SSH2Q76I76 1423 aa24.46■■□□□ 1.51
CCL3-204ENST00000613922 SPATA31A5Q5VU36 1347 aa24.46■■□□□ 1.51
CCL3-204ENST00000613922 SPATA31A7Q8IWB4 1347 aa24.46■■□□□ 1.51
CCL3-204ENST00000613922 CPDO75976 1380 aa24.45■■□□□ 1.5
CCL3-204ENST00000613922 ZC3H6P61129 1189 aaKnown RBP24.45■■□□□ 1.5
CCL3-204ENST00000613922 LMO7Q8WWI1 1683 aa24.44■■□□□ 1.5
CCL3-204ENST00000613922 CHRNA2Q15822 529 aa24.44■■□□□ 1.5
CCL3-204ENST00000613922 NLRP13Q86W25 1043 aa24.44■■□□□ 1.5
CCL3-204ENST00000613922 THSD7AQ9UPZ6 1657 aa24.43■■□□□ 1.5
CCL3-204ENST00000613922 FAM98CQ17RN3 349 aaKnown RBP24.43■■□□□ 1.5
CCL3-204ENST00000613922 KRT27Q7Z3Y8 459 aa24.43■■□□□ 1.5
CCL3-204ENST00000613922 CARD11Q9BXL7 1154 aa24.43■■□□□ 1.5
CCL3-204ENST00000613922 PIK3C2AO00443 1686 aa24.43■■□□□ 1.5
CCL3-204ENST00000613922 BLMP54132 1417 aaPredicted RBP24.42■■□□□ 1.5
CCL3-204ENST00000613922 SLIT3O75094 1523 aa24.4■■□□□ 1.5
CCL3-204ENST00000613922 CAMTA1Q9Y6Y1 1673 aa24.4■■□□□ 1.5
CCL3-204ENST00000613922 GCP02774 474 aa24.4■■□□□ 1.5
CCL3-204ENST00000613922 SPATA31A1Q5TZJ5 1347 aa24.39■■□□□ 1.5
CCL3-204ENST00000613922 ZNF692Q9BU19 519 aaPredicted RBP24.39■■□□□ 1.49
CCL3-204ENST00000613922 CPSF1Q10570 1443 aaKnown RBP24.38■■□□□ 1.49
CCL3-204ENST00000613922 MON2Q7Z3U7 1717 aa24.38■■□□□ 1.49
CCL3-204ENST00000613922 A0A0G2JS52 829 aa24.36■■□□□ 1.49
CCL3-204ENST00000613922 NLRP6P59044 892 aa24.36■■□□□ 1.49
CCL3-204ENST00000613922 MYT1Q01538 1121 aa24.36■■□□□ 1.49
CCL3-204ENST00000613922 STRN4Q9NRL3 753 aa24.36■■□□□ 1.49
CCL3-204ENST00000613922 TTC21BQ7Z4L5 1316 aa24.35■■□□□ 1.49
CCL3-204ENST00000613922 COL18A1P39060 1754 aa24.34■■□□□ 1.49
CCL3-204ENST00000613922 TTC21AQ8NDW8 1320 aa24.33■■□□□ 1.48
CCL3-204ENST00000613922 EVA1CP58658 441 aa24.32■■□□□ 1.48
CCL3-204ENST00000613922 COL5A2P05997 1499 aaPredicted RBP24.32■■□□□ 1.48
CCL3-204ENST00000613922 CD163L1Q9NR16 1453 aa24.31■■□□□ 1.48
CCL3-204ENST00000613922 AATKQ6ZMQ8 1374 aa24.3■■□□□ 1.48
CCL3-204ENST00000613922 KTN1Q86UP2 1357 aaKnown RBP24.3■■□□□ 1.48
CCL3-204ENST00000613922 LARP1Q6PKG0 1096 aaKnown RBP24.3■■□□□ 1.48
CCL3-204ENST00000613922 BARGINQ6ZT62 677 aa24.3■■□□□ 1.48
CCL3-204ENST00000613922 USP54Q70EL1 1684 aa24.3■■□□□ 1.48
CCL3-204ENST00000613922 RGPD1P0DJD0 1748 aa24.3■■□□□ 1.48
CCL3-204ENST00000613922 PUS7Q96PZ0 661 aaKnown RBP24.29■■□□□ 1.48
CCL3-204ENST00000613922 SF3B2Q13435 895 aaKnown RBP24.28■■□□□ 1.48
CCL3-204ENST00000613922 DEFB132Q7Z7B7 95 aa24.28■■□□□ 1.48
CCL3-204ENST00000613922 RGPD5Q99666 1765 aa24.26■■□□□ 1.47
CCL3-204ENST00000613922 TCP11L2Q8N4U5 519 aa24.26■■□□□ 1.47
CCL3-204ENST00000613922 USP35Q9P2H5 1018 aa24.26■■□□□ 1.47
CCL3-204ENST00000613922 ZRANB1Q9UGI0 708 aa24.26■■□□□ 1.47
CCL3-204ENST00000613922 NFAT5O94916 1531 aa24.25■■□□□ 1.47
CCL3-204ENST00000613922 TNS1Q9HBL0 1735 aaKnown RBP24.25■■□□□ 1.47
CCL3-204ENST00000613922 PARP4Q9UKK3 1724 aaKnown RBP24.25■■□□□ 1.47
CCL3-204ENST00000613922 KCNH5Q8NCM2 988 aa24.25■■□□□ 1.47
CCL3-204ENST00000613922 TESK2Q96S53 571 aa24.25■■□□□ 1.47
CCL3-204ENST00000613922 THRAP3Q9Y2W1 955 aaKnown RBP24.25■■□□□ 1.47
CCL3-204ENST00000613922 FAM182BQ5T319 152 aa24.24■■□□□ 1.47
CCL3-204ENST00000613922 CRB1P82279 1406 aa24.24■■□□□ 1.47
CCL3-204ENST00000613922 ST20-MTHFSA0A0A6YYL1 179 aa24.23■■□□□ 1.47
CCL3-204ENST00000613922 ARHGEF25Q86VW2 580 aa24.23■■□□□ 1.47
CCL3-204ENST00000613922 USP31Q70CQ4 1352 aa24.23■■□□□ 1.47
CCL3-204ENST00000613922 ZBTB7CA1YPR0 619 aa24.22■■□□□ 1.47
CCL3-204ENST00000613922 TMC1Q8TDI8 760 aa24.22■■□□□ 1.47
CCL3-204ENST00000613922 SLC12A5Q9H2X9 1139 aa24.22■■□□□ 1.47
CCL3-204ENST00000613922 WNK3Q9BYP7 1800 aa24.21■■□□□ 1.47
CCL3-204ENST00000613922 ABCC6O95255 1503 aa24.2■■□□□ 1.47
CCL3-204ENST00000613922 EDC4Q6P2E9 1401 aaKnown RBP24.2■■□□□ 1.46
CCL3-204ENST00000613922 SLC24A1O60721 1099 aa24.2■■□□□ 1.46
CCL3-204ENST00000613922 BAG6P46379 1132 aa24.2■■□□□ 1.46
CCL3-204ENST00000613922 HDGFL2Q7Z4V5 671 aaPredicted RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms