RNA–Protein interactions for RNA: ENST00000613667.1

LINC00649-216, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 827 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-216ENST00000613667 LINC01559Q495D7 138 aa6.61□□□□□ -1.35
LINC00649-216ENST00000613667 GPR161Q8N6U8 529 aaKnown RBP6.61□□□□□ -1.35
LINC00649-216ENST00000613667 SCARF2Q96GP6 870 aaPredicted RBP6.61□□□□□ -1.35
LINC00649-216ENST00000613667 VARSP26640 1264 aaKnown RBP6.6□□□□□ -1.35
LINC00649-216ENST00000613667 MARSP56192 900 aaKnown RBP6.6□□□□□ -1.35
LINC00649-216ENST00000613667 ARHGEF15O94989 841 aa6.59□□□□□ -1.35
LINC00649-216ENST00000613667 KRTAP1-3Q8IUG1 177 aa6.59□□□□□ -1.35
LINC00649-216ENST00000613667 BAP1Q92560 729 aa6.59□□□□□ -1.35
LINC00649-216ENST00000613667 MSTNO14793 375 aa6.58□□□□□ -1.36
LINC00649-216ENST00000613667 COL25A1Q9BXS0 654 aaPredicted RBP6.58□□□□□ -1.36
LINC00649-216ENST00000613667 UNC93B1Q9H1C4 597 aa6.58□□□□□ -1.36
LINC00649-216ENST00000613667 ZFAND3Q9H8U3 227 aa6.58□□□□□ -1.36
LINC00649-216ENST00000613667 UPP2O95045 317 aa6.57□□□□□ -1.36
LINC00649-216ENST00000613667 CCNYL3P0C7X3 344 aa6.57□□□□□ -1.36
LINC00649-216ENST00000613667 SLURP2P0DP57 97 aa6.57□□□□□ -1.36
LINC00649-216ENST00000613667 C6orf118Q5T5N4 469 aa6.57□□□□□ -1.36
LINC00649-216ENST00000613667 RETREG3Q86VR2 466 aa6.57□□□□□ -1.36
LINC00649-216ENST00000613667 NANOS1Q8WY41 292 aaKnown RBP6.57□□□□□ -1.36
LINC00649-216ENST00000613667 P3H3Q8IVL6 736 aa6.55□□□□□ -1.36
LINC00649-216ENST00000613667 ZNF511Q8NB15 262 aa6.55□□□□□ -1.36
LINC00649-216ENST00000613667 WHAMMQ8TF30 809 aa6.55□□□□□ -1.36
LINC00649-216ENST00000613667 DNMT3LQ9UJW3 386 aa6.55□□□□□ -1.36
LINC00649-216ENST00000613667 PCDHGC3Q9UN70 934 aa6.55□□□□□ -1.36
LINC00649-216ENST00000613667 SOS2Q07890 1332 aaPredicted RBP6.54□□□□□ -1.36
LINC00649-216ENST00000613667 ZIC2O95409 532 aaPredicted RBP6.54□□□□□ -1.36
LINC00649-216ENST00000613667 NR3C2P08235 984 aa6.54□□□□□ -1.36
LINC00649-216ENST00000613667 MS4A1P11836 297 aa6.54□□□□□ -1.36
LINC00649-216ENST00000613667 BMP2P12643 396 aa6.54□□□□□ -1.36
LINC00649-216ENST00000613667 MDM2Q00987 491 aaPredicted RBP6.54□□□□□ -1.36
LINC00649-216ENST00000613667 ITPKCQ96DU7 683 aa6.54□□□□□ -1.36
LINC00649-216ENST00000613667 EVA1BQ9NVM1 165 aa6.54□□□□□ -1.36
LINC00649-216ENST00000613667 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.53□□□□□ -1.36
LINC00649-216ENST00000613667 RNFT1Q5M7Z0 435 aa6.53□□□□□ -1.36
LINC00649-216ENST00000613667 LINC00528Q8N1L1 170 aa6.53□□□□□ -1.36
LINC00649-216ENST00000613667 FAM174AQ8TBP5 190 aa6.53□□□□□ -1.36
LINC00649-216ENST00000613667 SPOCK3Q9BQ16 436 aa6.53□□□□□ -1.36
LINC00649-216ENST00000613667 PTPRNQ16849 979 aa6.52□□□□□ -1.37
LINC00649-216ENST00000613667 PLA2G4EQ3MJ16 856 aa6.52□□□□□ -1.37
LINC00649-216ENST00000613667 CDK15Q96Q40 435 aa6.52□□□□□ -1.37
LINC00649-216ENST00000613667 KCNH2Q12809 1159 aa6.51□□□□□ -1.37
LINC00649-216ENST00000613667 NR5A1Q13285 461 aa6.51□□□□□ -1.37
LINC00649-216ENST00000613667 MEIOBQ8N635 442 aa6.51□□□□□ -1.37
LINC00649-216ENST00000613667 C6orf229H3BNL8 230 aa6.5□□□□□ -1.37
LINC00649-216ENST00000613667 PTSQ03393 145 aa6.5□□□□□ -1.37
LINC00649-216ENST00000613667 SMYD5Q6GMV2 418 aa6.5□□□□□ -1.37
LINC00649-216ENST00000613667 Q8N3U1 123 aa6.5□□□□□ -1.37
LINC00649-216ENST00000613667 SPTLC1O15269 473 aa6.49□□□□□ -1.37
LINC00649-216ENST00000613667 FDX1P10109 184 aa6.49□□□□□ -1.37
LINC00649-216ENST00000613667 FOXJ1Q92949 421 aa6.49□□□□□ -1.37
LINC00649-216ENST00000613667 PHF20L1A8MW92 1017 aa6.48□□□□□ -1.37
LINC00649-216ENST00000613667 K7ELQ4 463 aaPredicted RBP6.48□□□□□ -1.37
LINC00649-216ENST00000613667 MAP3K10Q02779 954 aa6.48□□□□□ -1.37
LINC00649-216ENST00000613667 ARID5BQ14865 1188 aa6.48□□□□□ -1.37
LINC00649-216ENST00000613667 GPIHBP1Q8IV16 184 aa6.48□□□□□ -1.37
LINC00649-216ENST00000613667 GALNT6Q8NCL4 622 aa6.48□□□□□ -1.37
LINC00649-216ENST00000613667 DCAF5Q96JK2 942 aa6.48□□□□□ -1.37
LINC00649-216ENST00000613667 PROCP04070 461 aa6.47□□□□□ -1.37
LINC00649-216ENST00000613667 GRM5P41594 1212 aa6.47□□□□□ -1.37
LINC00649-216ENST00000613667 MAP2K5Q13163 448 aa6.47□□□□□ -1.37
LINC00649-216ENST00000613667 CCDC155Q8N6L0 562 aa6.47□□□□□ -1.37
LINC00649-216ENST00000613667 TSEN34Q9BSV6 310 aaKnown RBP6.47□□□□□ -1.37
LINC00649-216ENST00000613667 ENAMQ9NRM1 1142 aa6.47□□□□□ -1.37
LINC00649-216ENST00000613667 TTLL8A6PVC2 850 aa6.46□□□□□ -1.38
LINC00649-216ENST00000613667 ITGB2P05107 769 aa6.46□□□□□ -1.38
LINC00649-216ENST00000613667 C4orf48Q5BLP8 95 aa6.46□□□□□ -1.38
LINC00649-216ENST00000613667 SV2AQ7L0J3 742 aa6.46□□□□□ -1.38
LINC00649-216ENST00000613667 FAM217BQ9NTX9 383 aaPredicted RBP6.46□□□□□ -1.38
LINC00649-216ENST00000613667 IRF6O14896 467 aa6.45□□□□□ -1.38
LINC00649-216ENST00000613667 LCE3BQ5TA77 95 aa6.45□□□□□ -1.38
LINC00649-216ENST00000613667 LYPD4Q6UWN0 246 aa6.45□□□□□ -1.38
LINC00649-216ENST00000613667 NUTM1Q86Y26 1132 aa6.45□□□□□ -1.38
LINC00649-216ENST00000613667 PRR7Q8TB68 274 aa6.45□□□□□ -1.38
LINC00649-216ENST00000613667 ADAMTS2O95450 1211 aa6.44□□□□□ -1.38
LINC00649-216ENST00000613667 NDUFV2P19404 249 aa6.44□□□□□ -1.38
LINC00649-216ENST00000613667 VWA5B2Q8N398 1253 aa6.44□□□□□ -1.38
LINC00649-216ENST00000613667 SLC35F4A4IF30 521 aa6.43□□□□□ -1.38
LINC00649-216ENST00000613667 FIGNL2A6NMB9 653 aa6.43□□□□□ -1.38
LINC00649-216ENST00000613667 ITGA6P23229 1130 aa6.43□□□□□ -1.38
LINC00649-216ENST00000613667 SRSF11Q05519 484 aaKnown RBP6.43□□□□□ -1.38
LINC00649-216ENST00000613667 DESI1Q6ICB0 168 aa6.43□□□□□ -1.38
LINC00649-216ENST00000613667 CDC14CA4D256 554 aa6.42□□□□□ -1.38
LINC00649-216ENST00000613667 CELA2BP08218 269 aaPredicted RBP6.42□□□□□ -1.38
LINC00649-216ENST00000613667 BEND7Q8N7W2 519 aaPredicted RBP6.42□□□□□ -1.38
LINC00649-216ENST00000613667 GPCPD1Q9NPB8 672 aa6.42□□□□□ -1.38
LINC00649-216ENST00000613667 MOXD2PA6NHM9 499 aa6.41□□□□□ -1.38
LINC00649-216ENST00000613667 CTHP32929 405 aa6.41□□□□□ -1.38
LINC00649-216ENST00000613667 PODNQ7Z5L7 613 aa6.41□□□□□ -1.38
LINC00649-216ENST00000613667 SPIRE2Q8WWL2 714 aa6.41□□□□□ -1.38
LINC00649-216ENST00000613667 MAP10Q9P2G4 905 aa6.41□□□□□ -1.38
LINC00649-216ENST00000613667 CCDC102AQ96A19 550 aa6.4□□□□□ -1.38
LINC00649-216ENST00000613667 EMILIN1Q9Y6C2 1016 aa6.39□□□□□ -1.39
LINC00649-216ENST00000613667 CNTNAP5Q8WYK1 1306 aa6.39□□□□□ -1.39
LINC00649-216ENST00000613667 SPDYE5A6NIY4 337 aa6.38□□□□□ -1.39
LINC00649-216ENST00000613667 BTBD11A6QL63 1104 aa6.38□□□□□ -1.39
LINC00649-216ENST00000613667 F12P00748 615 aaPredicted RBP6.38□□□□□ -1.39
LINC00649-216ENST00000613667 FSHRP23945 695 aa6.38□□□□□ -1.39
LINC00649-216ENST00000613667 CLCN1P35523 988 aa6.38□□□□□ -1.39
LINC00649-216ENST00000613667 BAG6P46379 1132 aa6.38□□□□□ -1.39
LINC00649-216ENST00000613667 MTMR2Q13614 643 aa6.38□□□□□ -1.39
LINC00649-216ENST00000613667 LYPD8Q6UX82 237 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms