RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 MORC1Q86VD1 984 aa27.44■■□□□ 1.98
CPNE9-205ENST00000613455 LTBP4Q8N2S1 1624 aa27.43■■□□□ 1.98
CPNE9-205ENST00000613455 ESCO1Q5FWF5 840 aa27.43■■□□□ 1.98
CPNE9-205ENST00000613455 CADPS2Q86UW7 1296 aa27.43■■□□□ 1.98
CPNE9-205ENST00000613455 KIF1AQ12756 1690 aa27.43■■□□□ 1.98
CPNE9-205ENST00000613455 TTC21BQ7Z4L5 1316 aa27.42■■□□□ 1.98
CPNE9-205ENST00000613455 ORAI2Q96SN7 254 aa27.41■■□□□ 1.98
CPNE9-205ENST00000613455 NME9Q86XW9 330 aa27.41■■□□□ 1.98
CPNE9-205ENST00000613455 AEBP2Q6ZN18 517 aaPredicted RBP27.4■■□□□ 1.98
CPNE9-205ENST00000613455 PIK3C2AO00443 1686 aa27.37■■□□□ 1.97
CPNE9-205ENST00000613455 TTC21AQ8NDW8 1320 aa27.36■■□□□ 1.97
CPNE9-205ENST00000613455 TNNT2P45379 298 aaPredicted RBP27.36■■□□□ 1.97
CPNE9-205ENST00000613455 ZRANB1Q9UGI0 708 aa27.36■■□□□ 1.97
CPNE9-205ENST00000613455 OVOS2A0A0J9YW53 1432 aa27.35■■□□□ 1.97
CPNE9-205ENST00000613455 OVOS2Q6IE36 1432 aa27.35■■□□□ 1.97
CPNE9-205ENST00000613455 YTHDC1Q96MU7 727 aaKnown RBP27.33■■□□□ 1.97
CPNE9-205ENST00000613455 USP54Q70EL1 1684 aa27.32■■□□□ 1.96
CPNE9-205ENST00000613455 PNISRQ8TF01 805 aaKnown RBP27.31■■□□□ 1.96
CPNE9-205ENST00000613455 TRPM3Q9HCF6 1732 aaPredicted RBP27.31■■□□□ 1.96
CPNE9-205ENST00000613455 MARF1Q9Y4F3 1742 aaKnown RBP27.3■■□□□ 1.96
CPNE9-205ENST00000613455 FOXO3O43524 673 aa27.3■■□□□ 1.96
CPNE9-205ENST00000613455 COG3Q96JB2 828 aa27.3■■□□□ 1.96
CPNE9-205ENST00000613455 SCAF1Q9H7N4 1312 aaKnown RBP27.29■■□□□ 1.96
CPNE9-205ENST00000613455 USP31Q70CQ4 1352 aa27.28■■□□□ 1.96
CPNE9-205ENST00000613455 PSME1Q06323 249 aa27.28■■□□□ 1.96
CPNE9-205ENST00000613455 FAM9BQ8IZU0 186 aa27.27■■□□□ 1.96
CPNE9-205ENST00000613455 MAP2P11137 1827 aaKnown RBP27.25■■□□□ 1.95
CPNE9-205ENST00000613455 MTHFSP49914 203 aa27.25■■□□□ 1.95
CPNE9-205ENST00000613455 SLAIN2Q9P270 581 aa27.25■■□□□ 1.95
CPNE9-205ENST00000613455 AATKQ6ZMQ8 1374 aa27.24■■□□□ 1.95
CPNE9-205ENST00000613455 XPCQ01831 940 aaPredicted RBP27.24■■□□□ 1.95
CPNE9-205ENST00000613455 BRINP3Q76B58 766 aa27.24■■□□□ 1.95
CPNE9-205ENST00000613455 PAK3O75914 559 aaPredicted RBP27.23■■□□□ 1.95
CPNE9-205ENST00000613455 FBLN1P23142 703 aa27.22■■□□□ 1.95
CPNE9-205ENST00000613455 SHPRHQ149N8 1683 aa27.22■■□□□ 1.95
CPNE9-205ENST00000613455 SMG6Q86US8 1419 aaKnown RBP27.21■■□□□ 1.95
CPNE9-205ENST00000613455 ALS2Q96Q42 1657 aa27.21■■□□□ 1.95
CPNE9-205ENST00000613455 KRT28Q7Z3Y7 464 aa27.21■■□□□ 1.95
CPNE9-205ENST00000613455 PXDNQ92626 1479 aa27.2■■□□□ 1.95
CPNE9-205ENST00000613455 ABTB2Q8N961 1025 aa27.2■■□□□ 1.94
CPNE9-205ENST00000613455 DDX17Q92841 729 aaKnown RBP27.2■■□□□ 1.94
CPNE9-205ENST00000613455 NPHP3Q7Z494 1330 aa27.2■■□□□ 1.94
CPNE9-205ENST00000613455 COL3A1P02461 1466 aaPredicted RBP27.19■■□□□ 1.94
CPNE9-205ENST00000613455 NLRP6P59044 892 aa27.19■■□□□ 1.94
CPNE9-205ENST00000613455 POLKQ9UBT6 870 aa27.19■■□□□ 1.94
CPNE9-205ENST00000613455 NUTM2GQ5VZR2 741 aa27.17■■□□□ 1.94
CPNE9-205ENST00000613455 PNPLA6Q8IY17 1366 aa27.16■■□□□ 1.94
CPNE9-205ENST00000613455 NHSL1Q5SYE7 1610 aa27.16■■□□□ 1.94
CPNE9-205ENST00000613455 SBNO1A3KN83 1393 aa27.15■■□□□ 1.94
CPNE9-205ENST00000613455 EMILIN1Q9Y6C2 1016 aa27.15■■□□□ 1.94
CPNE9-205ENST00000613455 CDK12Q9NYV4 1490 aaPredicted RBP27.15■■□□□ 1.94
CPNE9-205ENST00000613455 RRS1Q15050 365 aaKnown RBP27.14■■□□□ 1.94
CPNE9-205ENST00000613455 CFAP53Q96M91 514 aa27.14■■□□□ 1.94
CPNE9-205ENST00000613455 INSRP06213 1382 aa27.13■■□□□ 1.93
CPNE9-205ENST00000613455 PEAK1Q9H792 1746 aa27.13■■□□□ 1.93
CPNE9-205ENST00000613455 TNS3Q68CZ2 1445 aa27.11■■□□□ 1.93
CPNE9-205ENST00000613455 ROBO1Q9Y6N7 1651 aa27.11■■□□□ 1.93
CPNE9-205ENST00000613455 SLIT3O75094 1523 aa27.11■■□□□ 1.93
CPNE9-205ENST00000613455 NFAT5O94916 1531 aa27.11■■□□□ 1.93
CPNE9-205ENST00000613455 BLMP54132 1417 aaPredicted RBP27.11■■□□□ 1.93
CPNE9-205ENST00000613455 WDR43Q15061 677 aaKnown RBP eCLIP27.1■■□□□ 1.93
CPNE9-205ENST00000613455 ADAMTS8Q9UP79 889 aa27.1■■□□□ 1.93
CPNE9-205ENST00000613455 SOX12O15370 315 aa27.09■■□□□ 1.93
CPNE9-205ENST00000613455 USP19O94966 1318 aa27.08■■□□□ 1.93
CPNE9-205ENST00000613455 SOS2Q07890 1332 aaPredicted RBP27.08■■□□□ 1.93
CPNE9-205ENST00000613455 PPM1GO15355 546 aaPredicted RBP27.08■■□□□ 1.93
CPNE9-205ENST00000613455 HNRNPUQ00839 825 aaKnown RBP eCLIP27.08■■□□□ 1.93
CPNE9-205ENST00000613455 MED1Q15648 1581 aaPredicted RBP27.06■■□□□ 1.92
CPNE9-205ENST00000613455 MAP3K19Q56UN5 1328 aa27.06■■□□□ 1.92
CPNE9-205ENST00000613455 SPATA31A3Q5VYP0 1347 aa27.06■■□□□ 1.92
CPNE9-205ENST00000613455 LMOD2Q6P5Q4 547 aa27.06■■□□□ 1.92
CPNE9-205ENST00000613455 LTN1O94822 1766 aa27.06■■□□□ 1.92
CPNE9-205ENST00000613455 CRYBG1Q9Y4K1 1723 aa27.05■■□□□ 1.92
CPNE9-205ENST00000613455 IQSEC2Q5JU85 1478 aa27.03■■□□□ 1.92
CPNE9-205ENST00000613455 PHRF1Q9P1Y6 1649 aaKnown RBP27.03■■□□□ 1.92
CPNE9-205ENST00000613455 AHDC1Q5TGY3 1603 aaPredicted RBP27.02■■□□□ 1.92
CPNE9-205ENST00000613455 DIAPH1O60610 1272 aaKnown RBP27.02■■□□□ 1.92
CPNE9-205ENST00000613455 ARHGEF10O15013 1369 aa27.02■■□□□ 1.92
CPNE9-205ENST00000613455 KCNH5Q8NCM2 988 aa27.01■■□□□ 1.91
CPNE9-205ENST00000613455 FLT4P35916 1363 aa27■■□□□ 1.91
CPNE9-205ENST00000613455 KIF24Q5T7B8 1368 aa26.99■■□□□ 1.91
CPNE9-205ENST00000613455 GCP02774 474 aa26.99■■□□□ 1.91
CPNE9-205ENST00000613455 IL13P35225 146 aa26.98■■□□□ 1.91
CPNE9-205ENST00000613455 NUDCQ9Y266 331 aa26.98■■□□□ 1.91
CPNE9-205ENST00000613455 RTL1A6NKG5 1358 aa26.96■■□□□ 1.91
CPNE9-205ENST00000613455 TOM1O60784 492 aa26.96■■□□□ 1.91
CPNE9-205ENST00000613455 HSP90AB2PQ58FF8 381 aa26.96■■□□□ 1.91
CPNE9-205ENST00000613455 ZBED9Q6R2W3 1325 aa26.96■■□□□ 1.91
CPNE9-205ENST00000613455 U2SURPO15042 1029 aaKnown RBP26.95■■□□□ 1.9
CPNE9-205ENST00000613455 CENPBP07199 599 aaPredicted RBP26.95■■□□□ 1.9
CPNE9-205ENST00000613455 U2AF1L5P0DN76 240 aaPredicted RBP26.95■■□□□ 1.9
CPNE9-205ENST00000613455 U2AF1Q01081 240 aaKnown RBP eCLIP26.95■■□□□ 1.9
CPNE9-205ENST00000613455 PLEKHG5O94827 1062 aa26.94■■□□□ 1.9
CPNE9-205ENST00000613455 AMPHP49418 695 aa26.94■■□□□ 1.9
CPNE9-205ENST00000613455 RGPD1P0DJD0 1748 aa26.94■■□□□ 1.9
CPNE9-205ENST00000613455 ABCA3Q99758 1704 aa26.94■■□□□ 1.9
CPNE9-205ENST00000613455 SENP3-EIF4A1A0A087X0R7 540 aa26.93■■□□□ 1.9
CPNE9-205ENST00000613455 HOXC9P31274 260 aa26.93■■□□□ 1.9
CPNE9-205ENST00000613455 EIF4A2Q14240 407 aaKnown RBP26.93■■□□□ 1.9
CPNE9-205ENST00000613455 CCDC146Q8IYE0 955 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms