RNA–Protein interactions for RNA: ENST00000613452.1

LINC01138-204, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 1 (best)

Gene LINC01138, Length 1,050 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-204ENST00000613452 L3MBTL2Q969R5 705 aa13.85□□□□□ -0.19
LINC01138-204ENST00000613452 BRD4O60885 1362 aaPredicted RBP13.84□□□□□ -0.19
LINC01138-204ENST00000613452 BLMP54132 1417 aaPredicted RBP13.84□□□□□ -0.19
LINC01138-204ENST00000613452 SF3B2Q13435 895 aaKnown RBP13.84□□□□□ -0.19
LINC01138-204ENST00000613452 CENPJQ9HC77 1338 aaPredicted RBP13.84□□□□□ -0.19
LINC01138-204ENST00000613452 GLI3P10071 1580 aa13.83□□□□□ -0.19
LINC01138-204ENST00000613452 PRDM11Q9NQV5 511 aa13.83□□□□□ -0.2
LINC01138-204ENST00000613452 KIAA1210Q9ULL0 1709 aa13.83□□□□□ -0.2
LINC01138-204ENST00000613452 SPATA31A5Q5VU36 1347 aa13.83□□□□□ -0.2
LINC01138-204ENST00000613452 SPATA31A7Q8IWB4 1347 aa13.83□□□□□ -0.2
LINC01138-204ENST00000613452 ATP7BP35670 1465 aa13.82□□□□□ -0.2
LINC01138-204ENST00000613452 NWD2Q9ULI1 1742 aa13.82□□□□□ -0.2
LINC01138-204ENST00000613452 SRPK2P78362 688 aaKnown RBP13.82□□□□□ -0.2
LINC01138-204ENST00000613452 NLRP13Q86W25 1043 aa13.82□□□□□ -0.2
LINC01138-204ENST00000613452 ABTB2Q8N961 1025 aa13.82□□□□□ -0.2
LINC01138-204ENST00000613452 EP400Q96L91 3159 aa13.82□□□□□ -0.2
LINC01138-204ENST00000613452 TRPM3Q9HCF6 1732 aaPredicted RBP13.81□□□□□ -0.2
LINC01138-204ENST00000613452 FAM98CQ17RN3 349 aaKnown RBP13.81□□□□□ -0.2
LINC01138-204ENST00000613452 ALS2Q96Q42 1657 aa13.8□□□□□ -0.2
LINC01138-204ENST00000613452 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
LINC01138-204ENST00000613452 EVA1CP58658 441 aa13.79□□□□□ -0.2
LINC01138-204ENST00000613452 SIN3AQ96ST3 1273 aa13.79□□□□□ -0.2
LINC01138-204ENST00000613452 CABP2Q9NPB3 220 aa13.79□□□□□ -0.2
LINC01138-204ENST00000613452 CABP1Q9NZU7 370 aa13.79□□□□□ -0.2
LINC01138-204ENST00000613452 ARHGEF28Q8N1W1 1705 aaKnown RBP13.78□□□□□ -0.2
LINC01138-204ENST00000613452 GCP02774 474 aa13.78□□□□□ -0.2
LINC01138-204ENST00000613452 ZC3H6P61129 1189 aaKnown RBP13.78□□□□□ -0.2
LINC01138-204ENST00000613452 BARGINQ6ZT62 677 aa13.78□□□□□ -0.2
LINC01138-204ENST00000613452 SPATA31A1Q5TZJ5 1347 aa13.78□□□□□ -0.2
LINC01138-204ENST00000613452 EVC2Q86UK5 1308 aa13.78□□□□□ -0.2
LINC01138-204ENST00000613452 KIAA0232Q92628 1395 aa13.78□□□□□ -0.2
LINC01138-204ENST00000613452 COL14A1Q05707 1796 aaKnown RBP13.78□□□□□ -0.2
LINC01138-204ENST00000613452 A0A0G2JS52 829 aa13.77□□□□□ -0.21
LINC01138-204ENST00000613452 CPDO75976 1380 aa13.77□□□□□ -0.21
LINC01138-204ENST00000613452 BAG6P46379 1132 aa13.77□□□□□ -0.21
LINC01138-204ENST00000613452 MYT1Q01538 1121 aa13.77□□□□□ -0.21
LINC01138-204ENST00000613452 USP19O94966 1318 aa13.76□□□□□ -0.21
LINC01138-204ENST00000613452 NEUROD1Q13562 356 aa13.76□□□□□ -0.21
LINC01138-204ENST00000613452 CHRNA2Q15822 529 aa13.76□□□□□ -0.21
LINC01138-204ENST00000613452 NUTM2GQ5VZR2 741 aa13.76□□□□□ -0.21
LINC01138-204ENST00000613452 DEFB132Q7Z7B7 95 aa13.76□□□□□ -0.21
LINC01138-204ENST00000613452 THRAP3Q9Y2W1 955 aaKnown RBP13.76□□□□□ -0.21
LINC01138-204ENST00000613452 PPIP5K1Q6PFW1 1433 aa13.75□□□□□ -0.21
LINC01138-204ENST00000613452 C11orf95C9JLR9 678 aaPredicted RBP13.75□□□□□ -0.21
LINC01138-204ENST00000613452 FAM196AQ6ZSG2 479 aa13.75□□□□□ -0.21
LINC01138-204ENST00000613452 ITSN1Q15811 1721 aa13.75□□□□□ -0.21
LINC01138-204ENST00000613452 ABCA3Q99758 1704 aa13.74□□□□□ -0.21
LINC01138-204ENST00000613452 STRN4Q9NRL3 753 aa13.74□□□□□ -0.21
LINC01138-204ENST00000613452 PLCH1Q4KWH8 1693 aa13.74□□□□□ -0.21
LINC01138-204ENST00000613452 NLRP6P59044 892 aa13.73□□□□□ -0.21
LINC01138-204ENST00000613452 TCP11L2Q8N4U5 519 aa13.73□□□□□ -0.21
LINC01138-204ENST00000613452 SRCAPQ6ZRS2 3230 aa13.72□□□□□ -0.21
LINC01138-204ENST00000613452 ROCK2O75116 1388 aaKnown RBP13.71□□□□□ -0.21
LINC01138-204ENST00000613452 NRAPQ86VF7 1730 aa13.71□□□□□ -0.21
LINC01138-204ENST00000613452 SLC24A1O60721 1099 aa13.71□□□□□ -0.21
LINC01138-204ENST00000613452 PDE3BQ13370 1112 aa13.71□□□□□ -0.21
LINC01138-204ENST00000613452 LARP1Q6PKG0 1096 aaKnown RBP13.71□□□□□ -0.21
LINC01138-204ENST00000613452 KCNH5Q8NCM2 988 aa13.71□□□□□ -0.21
LINC01138-204ENST00000613452 PUS7Q96PZ0 661 aaKnown RBP13.71□□□□□ -0.21
LINC01138-204ENST00000613452 SSH2Q76I76 1423 aa13.71□□□□□ -0.22
LINC01138-204ENST00000613452 BRWD3Q6RI45 1802 aa13.71□□□□□ -0.22
LINC01138-204ENST00000613452 USP6P35125 1406 aa13.7□□□□□ -0.22
LINC01138-204ENST00000613452 AATKQ6ZMQ8 1374 aa13.7□□□□□ -0.22
LINC01138-204ENST00000613452 TTC21AQ8NDW8 1320 aa13.69□□□□□ -0.22
LINC01138-204ENST00000613452 CRYBG1Q9Y4K1 1723 aa13.69□□□□□ -0.22
LINC01138-204ENST00000613452 TOPAZ1Q8N9V7 1692 aa13.69□□□□□ -0.22
LINC01138-204ENST00000613452 TTC21BQ7Z4L5 1316 aa13.68□□□□□ -0.22
LINC01138-204ENST00000613452 DISP2A7MBM2 1401 aa13.68□□□□□ -0.22
LINC01138-204ENST00000613452 EN1Q05925 392 aaPredicted RBP13.68□□□□□ -0.22
LINC01138-204ENST00000613452 USP35Q9P2H5 1018 aa13.68□□□□□ -0.22
LINC01138-204ENST00000613452 CAMTA1Q9Y6Y1 1673 aa13.67□□□□□ -0.22
LINC01138-204ENST00000613452 FAM182BQ5T319 152 aa13.67□□□□□ -0.22
LINC01138-204ENST00000613452 ARHGEF25Q86VW2 580 aa13.67□□□□□ -0.22
LINC01138-204ENST00000613452 CAMKK2Q96RR4 588 aa13.67□□□□□ -0.22
LINC01138-204ENST00000613452 CDCA7Q9BWT1 371 aaPredicted RBP13.67□□□□□ -0.22
LINC01138-204ENST00000613452 CARD11Q9BXL7 1154 aa13.67□□□□□ -0.22
LINC01138-204ENST00000613452 SBNO2Q9Y2G9 1366 aa13.67□□□□□ -0.22
LINC01138-204ENST00000613452 TRIM37O94972 964 aa13.66□□□□□ -0.22
LINC01138-204ENST00000613452 PARD3Q8TEW0 1356 aa13.66□□□□□ -0.22
LINC01138-204ENST00000613452 CPSF1Q10570 1443 aaKnown RBP13.65□□□□□ -0.22
LINC01138-204ENST00000613452 APBA3O96018 575 aa13.65□□□□□ -0.22
LINC01138-204ENST00000613452 THSD7AQ9UPZ6 1657 aa13.65□□□□□ -0.22
LINC01138-204ENST00000613452 AXIN2Q9Y2T1 843 aa13.64□□□□□ -0.23
LINC01138-204ENST00000613452 PHRF1Q9P1Y6 1649 aaKnown RBP13.64□□□□□ -0.23
LINC01138-204ENST00000613452 CRB1P82279 1406 aa13.64□□□□□ -0.23
LINC01138-204ENST00000613452 EZH2Q15910 746 aaKnown RBP13.63□□□□□ -0.23
LINC01138-204ENST00000613452 TRPM1Q7Z4N2 1603 aa13.63□□□□□ -0.23
LINC01138-204ENST00000613452 COL5A2P05997 1499 aaPredicted RBP13.62□□□□□ -0.23
LINC01138-204ENST00000613452 KTN1Q86UP2 1357 aaKnown RBP13.62□□□□□ -0.23
LINC01138-204ENST00000613452 TOM1L2Q6ZVM7 507 aa13.62□□□□□ -0.23
LINC01138-204ENST00000613452 CARD10Q9BWT7 1032 aa13.62□□□□□ -0.23
LINC01138-204ENST00000613452 QRICH2Q9H0J4 1663 aa13.62□□□□□ -0.23
LINC01138-204ENST00000613452 NRKQ7Z2Y5 1582 aa13.62□□□□□ -0.23
LINC01138-204ENST00000613452 WDR17Q8IZU2 1322 aa13.62□□□□□ -0.23
LINC01138-204ENST00000613452 USP31Q70CQ4 1352 aa13.61□□□□□ -0.23
LINC01138-204ENST00000613452 TONSLQ96HA7 1378 aa13.61□□□□□ -0.23
LINC01138-204ENST00000613452 SLIT3O75094 1523 aa13.61□□□□□ -0.23
LINC01138-204ENST00000613452 LMO7Q8WWI1 1683 aa13.61□□□□□ -0.23
LINC01138-204ENST00000613452 PLSCR1O15162 318 aa13.61□□□□□ -0.23
LINC01138-204ENST00000613452 TRIM26Q12899 539 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms