RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 TXNDC2Q86VQ3 553 aa16.33■□□□□ 0.21
PCDHGA4-202ENST00000612927 MED14O60244 1454 aa16.33■□□□□ 0.21
PCDHGA4-202ENST00000612927 RUNDC1Q96C34 613 aa16.33■□□□□ 0.2
PCDHGA4-202ENST00000612927 HDGFP51858 240 aaKnown RBP16.32■□□□□ 0.2
PCDHGA4-202ENST00000612927 NFKBIBQ15653 356 aa16.32■□□□□ 0.2
PCDHGA4-202ENST00000612927 WWC1Q8IX03 1113 aa16.32■□□□□ 0.2
PCDHGA4-202ENST00000612927 NGEFQ8N5V2 710 aa16.32■□□□□ 0.2
PCDHGA4-202ENST00000612927 KNDC1Q76NI1 1749 aa16.32■□□□□ 0.2
PCDHGA4-202ENST00000612927 TECPR2O15040 1411 aa16.31■□□□□ 0.2
PCDHGA4-202ENST00000612927 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.31■□□□□ 0.2
PCDHGA4-202ENST00000612927 ATP7BP35670 1465 aa16.31■□□□□ 0.2
PCDHGA4-202ENST00000612927 PODXL2Q9NZ53 605 aa16.31■□□□□ 0.2
PCDHGA4-202ENST00000612927 KIF20BQ96Q89 1820 aa16.3■□□□□ 0.2
PCDHGA4-202ENST00000612927 COL3A1P02461 1466 aaPredicted RBP16.3■□□□□ 0.2
PCDHGA4-202ENST00000612927 CPS1P31327 1500 aa16.3■□□□□ 0.2
PCDHGA4-202ENST00000612927 WASLO00401 505 aaPredicted RBP16.3■□□□□ 0.2
PCDHGA4-202ENST00000612927 TCP11L2Q8N4U5 519 aa16.3■□□□□ 0.2
PCDHGA4-202ENST00000612927 ADAMTS13Q76LX8 1427 aa16.3■□□□□ 0.2
PCDHGA4-202ENST00000612927 KDM2BQ8NHM5 1336 aa16.3■□□□□ 0.2
PCDHGA4-202ENST00000612927 FAM135BQ49AJ0 1406 aa16.3■□□□□ 0.2
PCDHGA4-202ENST00000612927 RSPH6AQ9H0K4 717 aa16.29■□□□□ 0.2
PCDHGA4-202ENST00000612927 LTKP29376 864 aa16.29■□□□□ 0.2
PCDHGA4-202ENST00000612927 C3P01024 1663 aa16.28■□□□□ 0.2
PCDHGA4-202ENST00000612927 U2AF1L5P0DN76 240 aaPredicted RBP16.28■□□□□ 0.2
PCDHGA4-202ENST00000612927 U2AF1Q01081 240 aaKnown RBP eCLIP16.28■□□□□ 0.2
PCDHGA4-202ENST00000612927 FRAT1Q92837 279 aaPredicted RBP16.28■□□□□ 0.2
PCDHGA4-202ENST00000612927 PPIP5K1Q6PFW1 1433 aa16.27■□□□□ 0.2
PCDHGA4-202ENST00000612927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.27■□□□□ 0.2
PCDHGA4-202ENST00000612927 SIRT1Q96EB6 747 aa16.27■□□□□ 0.2
PCDHGA4-202ENST00000612927 PHF23Q9BUL5 403 aaPredicted RBP16.27■□□□□ 0.2
PCDHGA4-202ENST00000612927 PLPPR3Q6T4P5 718 aa16.27■□□□□ 0.19
PCDHGA4-202ENST00000612927 FAM43AQ8N2R8 423 aa16.27■□□□□ 0.19
PCDHGA4-202ENST00000612927 ROBO2Q9HCK4 1378 aa16.26■□□□□ 0.19
PCDHGA4-202ENST00000612927 PLEKHG1Q9ULL1 1385 aa16.26■□□□□ 0.19
PCDHGA4-202ENST00000612927 CPSF1Q10570 1443 aaKnown RBP16.26■□□□□ 0.19
PCDHGA4-202ENST00000612927 ADGRB2O60241 1585 aa16.26■□□□□ 0.19
PCDHGA4-202ENST00000612927 NCKAP5LQ9HCH0 1330 aa16.25■□□□□ 0.19
PCDHGA4-202ENST00000612927 FER1L4A9Z1Z3 1794 aa16.25■□□□□ 0.19
PCDHGA4-202ENST00000612927 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
PCDHGA4-202ENST00000612927 CENPQQ7L2Z9 268 aaPredicted RBP16.24■□□□□ 0.19
PCDHGA4-202ENST00000612927 NUDT16Q96DE0 195 aaKnown RBP16.24■□□□□ 0.19
PCDHGA4-202ENST00000612927 U2SURPO15042 1029 aaKnown RBP16.24■□□□□ 0.19
PCDHGA4-202ENST00000612927 CDC42BPGQ6DT37 1551 aa16.23■□□□□ 0.19
PCDHGA4-202ENST00000612927 PNPLA6Q8IY17 1366 aa16.22■□□□□ 0.19
PCDHGA4-202ENST00000612927 FBLN1P23142 703 aa16.22■□□□□ 0.19
PCDHGA4-202ENST00000612927 CCDC27Q2M243 656 aa16.22■□□□□ 0.19
PCDHGA4-202ENST00000612927 EDC4Q6P2E9 1401 aaKnown RBP16.22■□□□□ 0.19
PCDHGA4-202ENST00000612927 PRR36Q9H6K5 1346 aa16.22■□□□□ 0.19
PCDHGA4-202ENST00000612927 CANXP27824 592 aaKnown RBP16.22■□□□□ 0.19
PCDHGA4-202ENST00000612927 WDR63Q8IWG1 891 aa16.22■□□□□ 0.19
PCDHGA4-202ENST00000612927 PANK1Q8TE04 598 aa16.22■□□□□ 0.19
PCDHGA4-202ENST00000612927 PLEKHF1Q96S99 279 aa16.22■□□□□ 0.19
PCDHGA4-202ENST00000612927 SLC26A8Q96RN1 970 aa16.21■□□□□ 0.19
PCDHGA4-202ENST00000612927 PTPRUQ92729 1446 aa16.21■□□□□ 0.19
PCDHGA4-202ENST00000612927 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.21■□□□□ 0.19
PCDHGA4-202ENST00000612927 ARHGAP23Q9P227 1491 aa16.21■□□□□ 0.19
PCDHGA4-202ENST00000612927 SLIT1O75093 1534 aa16.21■□□□□ 0.19
PCDHGA4-202ENST00000612927 NME9Q86XW9 330 aa16.21■□□□□ 0.18
PCDHGA4-202ENST00000612927 CCDC61Q9Y6R9 512 aa16.21■□□□□ 0.18
PCDHGA4-202ENST00000612927 BCL2L13Q9BXK5 485 aa16.2■□□□□ 0.18
PCDHGA4-202ENST00000612927 DIAPH1O60610 1272 aaKnown RBP16.2■□□□□ 0.18
PCDHGA4-202ENST00000612927 ZRANB1Q9UGI0 708 aa16.2■□□□□ 0.18
PCDHGA4-202ENST00000612927 MON2Q7Z3U7 1717 aa16.2■□□□□ 0.18
PCDHGA4-202ENST00000612927 POLKQ9UBT6 870 aa16.19■□□□□ 0.18
PCDHGA4-202ENST00000612927 COG6Q9Y2V7 657 aa16.19■□□□□ 0.18
PCDHGA4-202ENST00000612927 EID1Q9Y6B2 187 aa16.19■□□□□ 0.18
PCDHGA4-202ENST00000612927 NCBP3Q53F19 620 aaKnown RBP16.19■□□□□ 0.18
PCDHGA4-202ENST00000612927 RARSP54136 660 aaKnown RBP16.18■□□□□ 0.18
PCDHGA4-202ENST00000612927 AKAP12Q02952 1782 aa16.18■□□□□ 0.18
PCDHGA4-202ENST00000612927 RGS3P49796 1198 aa16.18■□□□□ 0.18
PCDHGA4-202ENST00000612927 TNNQ9UQP3 1299 aa16.18■□□□□ 0.18
PCDHGA4-202ENST00000612927 ITSN1Q15811 1721 aa16.17■□□□□ 0.18
PCDHGA4-202ENST00000612927 TMPOP42166 694 aaKnown RBP16.16■□□□□ 0.18
PCDHGA4-202ENST00000612927 PDE3AQ14432 1141 aa16.16■□□□□ 0.18
PCDHGA4-202ENST00000612927 MAPK8IP3Q9UPT6 1336 aa16.16■□□□□ 0.18
PCDHGA4-202ENST00000612927 FAM161AQ3B820 660 aa16.16■□□□□ 0.18
PCDHGA4-202ENST00000612927 IGHDP01880 384 aa16.15■□□□□ 0.18
PCDHGA4-202ENST00000612927 EMILIN1Q9Y6C2 1016 aa16.15■□□□□ 0.18
PCDHGA4-202ENST00000612927 TSR2Q969E8 191 aaKnown RBP16.15■□□□□ 0.18
PCDHGA4-202ENST00000612927 TRIM35Q9UPQ4 493 aa16.15■□□□□ 0.18
PCDHGA4-202ENST00000612927 LRRC7Q96NW7 1537 aa16.15■□□□□ 0.18
PCDHGA4-202ENST00000612927 TOPAZ1Q8N9V7 1692 aa16.15■□□□□ 0.18
PCDHGA4-202ENST00000612927 MAP2P11137 1827 aaKnown RBP16.14■□□□□ 0.17
PCDHGA4-202ENST00000612927 NUTM2FA1L443 756 aa16.14■□□□□ 0.17
PCDHGA4-202ENST00000612927 RLBP1P12271 317 aa16.14■□□□□ 0.17
PCDHGA4-202ENST00000612927 AMOTL2Q9Y2J4 779 aa16.14■□□□□ 0.17
PCDHGA4-202ENST00000612927 THEMISQ8N1K5 641 aaPredicted RBP16.13■□□□□ 0.17
PCDHGA4-202ENST00000612927 CLUAP1Q96AJ1 413 aa16.13■□□□□ 0.17
PCDHGA4-202ENST00000612927 MYH16Q9H6N6 1097 aa16.13■□□□□ 0.17
PCDHGA4-202ENST00000612927 TBX22Q9Y458 520 aa16.13■□□□□ 0.17
PCDHGA4-202ENST00000612927 SLC4A3P48751 1232 aa16.12■□□□□ 0.17
PCDHGA4-202ENST00000612927 COG3Q96JB2 828 aa16.12■□□□□ 0.17
PCDHGA4-202ENST00000612927 AATKQ6ZMQ8 1374 aa16.12■□□□□ 0.17
PCDHGA4-202ENST00000612927 ZNF692Q9BU19 519 aaPredicted RBP16.12■□□□□ 0.17
PCDHGA4-202ENST00000612927 CDK12Q9NYV4 1490 aaPredicted RBP16.12■□□□□ 0.17
PCDHGA4-202ENST00000612927 NRKQ7Z2Y5 1582 aa16.12■□□□□ 0.17
PCDHGA4-202ENST00000612927 FRAT2O75474 233 aaPredicted RBP16.12■□□□□ 0.17
PCDHGA4-202ENST00000612927 C8orf34Q49A92 452 aa16.12■□□□□ 0.17
PCDHGA4-202ENST00000612927 ACEP12821 1306 aa16.11■□□□□ 0.17
PCDHGA4-202ENST00000612927 PTCH1Q13635 1447 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms