RNA–Protein interactions for RNA: ENST00000612798.4

LSP1-217, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 1,881 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-217ENST00000612798 NCOA3Q9Y6Q9 1424 aa23.1■■□□□ 1.29
LSP1-217ENST00000612798 TTC21BQ7Z4L5 1316 aa23.1■■□□□ 1.29
LSP1-217ENST00000612798 NRKQ7Z2Y5 1582 aa23.08■■□□□ 1.29
LSP1-217ENST00000612798 FBLN1P23142 703 aa23.08■■□□□ 1.29
LSP1-217ENST00000612798 C1orf167Q5SNV9 1468 aa23.08■■□□□ 1.28
LSP1-217ENST00000612798 PNISRQ8TF01 805 aaKnown RBP23.07■■□□□ 1.28
LSP1-217ENST00000612798 MSH6P52701 1360 aa23.07■■□□□ 1.28
LSP1-217ENST00000612798 MST1RQ04912 1400 aa23.07■■□□□ 1.28
LSP1-217ENST00000612798 SSH2Q76I76 1423 aa23.07■■□□□ 1.28
LSP1-217ENST00000612798 ANKRD26Q9UPS8 1709 aa23.06■■□□□ 1.28
LSP1-217ENST00000612798 AEBP2Q6ZN18 517 aaPredicted RBP23.05■■□□□ 1.28
LSP1-217ENST00000612798 CADPS2Q86UW7 1296 aa23.04■■□□□ 1.28
LSP1-217ENST00000612798 DCCP43146 1447 aa23.03■■□□□ 1.28
LSP1-217ENST00000612798 FOXO3O43524 673 aa23.03■■□□□ 1.28
LSP1-217ENST00000612798 XPCQ01831 940 aaPredicted RBP23.03■■□□□ 1.28
LSP1-217ENST00000612798 MTHFSP49914 203 aa23.02■■□□□ 1.28
LSP1-217ENST00000612798 PAK3O75914 559 aaPredicted RBP23.01■■□□□ 1.27
LSP1-217ENST00000612798 PSME1Q06323 249 aa23■■□□□ 1.27
LSP1-217ENST00000612798 NUTM2GQ5VZR2 741 aa23■■□□□ 1.27
LSP1-217ENST00000612798 DDX17Q92841 729 aaKnown RBP23■■□□□ 1.27
LSP1-217ENST00000612798 COG3Q96JB2 828 aa23■■□□□ 1.27
LSP1-217ENST00000612798 SENP3-EIF4A1A0A087X0R7 540 aa22.99■■□□□ 1.27
LSP1-217ENST00000612798 TTC21AQ8NDW8 1320 aa22.98■■□□□ 1.27
LSP1-217ENST00000612798 PIK3C2AO00443 1686 aa22.96■■□□□ 1.27
LSP1-217ENST00000612798 LTBP4Q8N2S1 1624 aa22.96■■□□□ 1.27
LSP1-217ENST00000612798 SOX12O15370 315 aa22.95■■□□□ 1.26
LSP1-217ENST00000612798 OVOS2A0A0J9YW53 1432 aa22.95■■□□□ 1.26
LSP1-217ENST00000612798 OVOS2Q6IE36 1432 aa22.95■■□□□ 1.26
LSP1-217ENST00000612798 HNRNPUQ00839 825 aaKnown RBP eCLIP22.94■■□□□ 1.263e-9■□□□□ 8.3
LSP1-217ENST00000612798 ABTB2Q8N961 1025 aa22.94■■□□□ 1.26
LSP1-217ENST00000612798 RRS1Q15050 365 aaKnown RBP22.94■■□□□ 1.26
LSP1-217ENST00000612798 KRT28Q7Z3Y7 464 aa22.94■■□□□ 1.26
LSP1-217ENST00000612798 SLAIN2Q9P270 581 aa22.94■■□□□ 1.26
LSP1-217ENST00000612798 POLKQ9UBT6 870 aa22.94■■□□□ 1.26
LSP1-217ENST00000612798 PPM1GO15355 546 aaPredicted RBP22.93■■□□□ 1.26
LSP1-217ENST00000612798 NLRP6P59044 892 aa22.93■■□□□ 1.26
LSP1-217ENST00000612798 EMILIN1Q9Y6C2 1016 aa22.93■■□□□ 1.26
LSP1-217ENST00000612798 KIF1AQ12756 1690 aa22.93■■□□□ 1.26
LSP1-217ENST00000612798 ADAMTS8Q9UP79 889 aa22.92■■□□□ 1.26
LSP1-217ENST00000612798 BRINP3Q76B58 766 aa22.92■■□□□ 1.26
LSP1-217ENST00000612798 SCAF1Q9H7N4 1312 aaKnown RBP22.91■■□□□ 1.26
LSP1-217ENST00000612798 MAP2P11137 1827 aaKnown RBP22.9■■□□□ 1.26
LSP1-217ENST00000612798 PLEKHG5O94827 1062 aa22.9■■□□□ 1.26
LSP1-217ENST00000612798 USP31Q70CQ4 1352 aa22.9■■□□□ 1.26
LSP1-217ENST00000612798 WDR43Q15061 677 aaKnown RBP eCLIP22.9■■□□□ 1.26
LSP1-217ENST00000612798 MARF1Q9Y4F3 1742 aaKnown RBP22.88■■□□□ 1.25
LSP1-217ENST00000612798 LMOD2Q6P5Q4 547 aa22.88■■□□□ 1.25
LSP1-217ENST00000612798 CENPBP07199 599 aaPredicted RBP22.88■■□□□ 1.25
LSP1-217ENST00000612798 CFAP53Q96M91 514 aa22.88■■□□□ 1.25
LSP1-217ENST00000612798 TRPM3Q9HCF6 1732 aaPredicted RBP22.87■■□□□ 1.25
LSP1-217ENST00000612798 AATKQ6ZMQ8 1374 aa22.87■■□□□ 1.25
LSP1-217ENST00000612798 SHPRHQ149N8 1683 aa22.87■■□□□ 1.25
LSP1-217ENST00000612798 COL3A1P02461 1466 aaPredicted RBP22.85■■□□□ 1.25
LSP1-217ENST00000612798 NPHP3Q7Z494 1330 aa22.84■■□□□ 1.25
LSP1-217ENST00000612798 CCDC146Q8IYE0 955 aa22.83■■□□□ 1.24
LSP1-217ENST00000612798 PNPLA6Q8IY17 1366 aa22.83■■□□□ 1.24
LSP1-217ENST00000612798 PXDNQ92626 1479 aa22.81■■□□□ 1.24
LSP1-217ENST00000612798 SMG6Q86US8 1419 aaKnown RBP22.81■■□□□ 1.24
LSP1-217ENST00000612798 SALL2Q9Y467 1007 aaPredicted RBP22.81■■□□□ 1.24
LSP1-217ENST00000612798 USP54Q70EL1 1684 aa22.81■■□□□ 1.24
LSP1-217ENST00000612798 MAP3K19Q56UN5 1328 aa22.8■■□□□ 1.24
LSP1-217ENST00000612798 PEAK1Q9H792 1746 aa22.8■■□□□ 1.24
LSP1-217ENST00000612798 BLMP54132 1417 aaPredicted RBP22.8■■□□□ 1.24
LSP1-217ENST00000612798 DIAPH1O60610 1272 aaKnown RBP22.79■■□□□ 1.24
LSP1-217ENST00000612798 U2SURPO15042 1029 aaKnown RBP22.79■■□□□ 1.24
LSP1-217ENST00000612798 ALS2Q96Q42 1657 aa22.78■■□□□ 1.24
LSP1-217ENST00000612798 CDK12Q9NYV4 1490 aaPredicted RBP22.78■■□□□ 1.24
LSP1-217ENST00000612798 INSRP06213 1382 aa22.78■■□□□ 1.24
LSP1-217ENST00000612798 U2AF1L5P0DN76 240 aaPredicted RBP22.77■■□□□ 1.24
LSP1-217ENST00000612798 U2AF1Q01081 240 aaKnown RBP eCLIP22.77■■□□□ 1.24
LSP1-217ENST00000612798 SBNO1A3KN83 1393 aa22.77■■□□□ 1.24
LSP1-217ENST00000612798 HSP90AB2PQ58FF8 381 aa22.77■■□□□ 1.24
LSP1-217ENST00000612798 SPATA31A3Q5VYP0 1347 aa22.75■■□□□ 1.23
LSP1-217ENST00000612798 TNS3Q68CZ2 1445 aa22.75■■□□□ 1.23
LSP1-217ENST00000612798 ZBTB7CA1YPR0 619 aa22.75■■□□□ 1.23
LSP1-217ENST00000612798 IL13P35225 146 aa22.75■■□□□ 1.23
LSP1-217ENST00000612798 NFAT5O94916 1531 aa22.74■■□□□ 1.23
LSP1-217ENST00000612798 AMPHP49418 695 aa22.74■■□□□ 1.23
LSP1-217ENST00000612798 CABLES1Q8TDN4 633 aa22.74■■□□□ 1.23
LSP1-217ENST00000612798 NUDCQ9Y266 331 aa22.74■■□□□ 1.23
LSP1-217ENST00000612798 SOS2Q07890 1332 aaPredicted RBP22.74■■□□□ 1.23
LSP1-217ENST00000612798 GCP02774 474 aa22.73■■□□□ 1.23
LSP1-217ENST00000612798 ZBED9Q6R2W3 1325 aa22.73■■□□□ 1.23
LSP1-217ENST00000612798 USP19O94966 1318 aa22.73■■□□□ 1.23
LSP1-217ENST00000612798 MED1Q15648 1581 aaPredicted RBP22.72■■□□□ 1.23
LSP1-217ENST00000612798 ROBO1Q9Y6N7 1651 aa22.72■■□□□ 1.23
LSP1-217ENST00000612798 EIF4A2Q14240 407 aaKnown RBP22.72■■□□□ 1.23
LSP1-217ENST00000612798 SLIT3O75094 1523 aa22.71■■□□□ 1.23
LSP1-217ENST00000612798 APAF1O14727 1248 aa22.71■■□□□ 1.23
LSP1-217ENST00000612798 KCNH5Q8NCM2 988 aa22.71■■□□□ 1.23
LSP1-217ENST00000612798 NHSL1Q5SYE7 1610 aa22.7■■□□□ 1.22
LSP1-217ENST00000612798 HOXC9P31274 260 aa22.7■■□□□ 1.22
LSP1-217ENST00000612798 LTN1O94822 1766 aa22.69■■□□□ 1.22
LSP1-217ENST00000612798 FLT4P35916 1363 aa22.69■■□□□ 1.22
LSP1-217ENST00000612798 HMOX1P09601 288 aa22.69■■□□□ 1.22
LSP1-217ENST00000612798 ZC3H6P61129 1189 aaKnown RBP22.68■■□□□ 1.22
LSP1-217ENST00000612798 PIP4K2BP78356 416 aa22.68■■□□□ 1.22
LSP1-217ENST00000612798 RUNDC1Q96C34 613 aa22.66■■□□□ 1.22
LSP1-217ENST00000612798 LTV1Q96GA3 475 aaPredicted RBP22.66■■□□□ 1.22
LSP1-217ENST00000612798 ARHGEF25Q86VW2 580 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms