RNA–Protein interactions for RNA: ENST00000612778.4

MUC1-225, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-225ENST00000612778 PNISRQ8TF01 805 aaKnown RBP18.59■□□□□ 0.57
MUC1-225ENST00000612778 ORAI2Q96SN7 254 aa18.59■□□□□ 0.57
MUC1-225ENST00000612778 DCCP43146 1447 aa18.58■□□□□ 0.57
MUC1-225ENST00000612778 SSH2Q76I76 1423 aa18.58■□□□□ 0.57
MUC1-225ENST00000612778 MSH6P52701 1360 aa18.58■□□□□ 0.56
MUC1-225ENST00000612778 ZRANB1Q9UGI0 708 aa18.58■□□□□ 0.56
MUC1-225ENST00000612778 C1orf167Q5SNV9 1468 aa18.57■□□□□ 0.56
MUC1-225ENST00000612778 CADPS2Q86UW7 1296 aa18.57■□□□□ 0.56
MUC1-225ENST00000612778 MST1RQ04912 1400 aa18.55■□□□□ 0.56
MUC1-225ENST00000612778 NRKQ7Z2Y5 1582 aa18.54■□□□□ 0.56
MUC1-225ENST00000612778 XIRP1Q702N8 1843 aaKnown RBP18.54■□□□□ 0.56
MUC1-225ENST00000612778 KIF20BQ96Q89 1820 aa18.54■□□□□ 0.56
MUC1-225ENST00000612778 TTC21AQ8NDW8 1320 aa18.53■□□□□ 0.56
MUC1-225ENST00000612778 MTHFSP49914 203 aa18.53■□□□□ 0.56
MUC1-225ENST00000612778 COG3Q96JB2 828 aa18.53■□□□□ 0.56
MUC1-225ENST00000612778 FOXO3O43524 673 aa18.52■□□□□ 0.56
MUC1-225ENST00000612778 PSME1Q06323 249 aa18.52■□□□□ 0.56
MUC1-225ENST00000612778 ANKRD26Q9UPS8 1709 aa18.52■□□□□ 0.55
MUC1-225ENST00000612778 FBLN1P23142 703 aa18.5■□□□□ 0.55
MUC1-225ENST00000612778 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
MUC1-225ENST00000612778 PAK3O75914 559 aaPredicted RBP18.49■□□□□ 0.55
MUC1-225ENST00000612778 OVOS2A0A0J9YW53 1432 aa18.48■□□□□ 0.55
MUC1-225ENST00000612778 OVOS2Q6IE36 1432 aa18.48■□□□□ 0.55
MUC1-225ENST00000612778 HNRNPUQ00839 825 aaKnown RBP eCLIP18.47■□□□□ 0.55
MUC1-225ENST00000612778 XPCQ01831 940 aaPredicted RBP18.47■□□□□ 0.55
MUC1-225ENST00000612778 SLAIN2Q9P270 581 aa18.47■□□□□ 0.55
MUC1-225ENST00000612778 USP31Q70CQ4 1352 aa18.47■□□□□ 0.55
MUC1-225ENST00000612778 ABTB2Q8N961 1025 aa18.46■□□□□ 0.55
MUC1-225ENST00000612778 POLKQ9UBT6 870 aa18.46■□□□□ 0.55
MUC1-225ENST00000612778 NLRP6P59044 892 aa18.46■□□□□ 0.55
MUC1-225ENST00000612778 KRT28Q7Z3Y7 464 aa18.46■□□□□ 0.55
MUC1-225ENST00000612778 CFAP53Q96M91 514 aa18.46■□□□□ 0.55
MUC1-225ENST00000612778 AATKQ6ZMQ8 1374 aa18.46■□□□□ 0.55
MUC1-225ENST00000612778 LTBP4Q8N2S1 1624 aa18.45■□□□□ 0.54
MUC1-225ENST00000612778 WDR43Q15061 677 aaKnown RBP eCLIP18.45■□□□□ 0.54
MUC1-225ENST00000612778 NUTM2GQ5VZR2 741 aa18.45■□□□□ 0.54
MUC1-225ENST00000612778 ADAMTS8Q9UP79 889 aa18.45■□□□□ 0.54
MUC1-225ENST00000612778 KIF1AQ12756 1690 aa18.45■□□□□ 0.54
MUC1-225ENST00000612778 PIK3C2AO00443 1686 aa18.44■□□□□ 0.54
MUC1-225ENST00000612778 CENPBP07199 599 aaPredicted RBP18.44■□□□□ 0.54
MUC1-225ENST00000612778 BRINP3Q76B58 766 aa18.44■□□□□ 0.54
MUC1-225ENST00000612778 DDX17Q92841 729 aaKnown RBP18.44■□□□□ 0.54
MUC1-225ENST00000612778 RRS1Q15050 365 aaKnown RBP18.43■□□□□ 0.54
MUC1-225ENST00000612778 EMILIN1Q9Y6C2 1016 aa18.43■□□□□ 0.54
MUC1-225ENST00000612778 PPM1GO15355 546 aaPredicted RBP18.42■□□□□ 0.54
MUC1-225ENST00000612778 PNPLA6Q8IY17 1366 aa18.41■□□□□ 0.54
MUC1-225ENST00000612778 SOX12O15370 315 aa18.41■□□□□ 0.54
MUC1-225ENST00000612778 NPHP3Q7Z494 1330 aa18.41■□□□□ 0.54
MUC1-225ENST00000612778 INSRP06213 1382 aa18.39■□□□□ 0.53
MUC1-225ENST00000612778 SMG6Q86US8 1419 aaKnown RBP18.39■□□□□ 0.53
MUC1-225ENST00000612778 COL3A1P02461 1466 aaPredicted RBP18.38■□□□□ 0.53
MUC1-225ENST00000612778 SENP3-EIF4A1A0A087X0R7 540 aa18.38■□□□□ 0.53
MUC1-225ENST00000612778 LMOD2Q6P5Q4 547 aa18.38■□□□□ 0.53
MUC1-225ENST00000612778 BLMP54132 1417 aaPredicted RBP18.37■□□□□ 0.53
MUC1-225ENST00000612778 TRPM3Q9HCF6 1732 aaPredicted RBP18.36■□□□□ 0.53
MUC1-225ENST00000612778 MAP2P11137 1827 aaKnown RBP18.36■□□□□ 0.53
MUC1-225ENST00000612778 DIAPH1O60610 1272 aaKnown RBP18.36■□□□□ 0.53
MUC1-225ENST00000612778 SBNO1A3KN83 1393 aa18.36■□□□□ 0.53
MUC1-225ENST00000612778 SHPRHQ149N8 1683 aa18.36■□□□□ 0.53
MUC1-225ENST00000612778 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
MUC1-225ENST00000612778 MAP3K19Q56UN5 1328 aa18.35■□□□□ 0.53
MUC1-225ENST00000612778 CDK12Q9NYV4 1490 aaPredicted RBP18.35■□□□□ 0.53
MUC1-225ENST00000612778 MARF1Q9Y4F3 1742 aaKnown RBP18.35■□□□□ 0.53
MUC1-225ENST00000612778 USP54Q70EL1 1684 aa18.35■□□□□ 0.53
MUC1-225ENST00000612778 PXDNQ92626 1479 aa18.35■□□□□ 0.53
MUC1-225ENST00000612778 ZBED9Q6R2W3 1325 aa18.34■□□□□ 0.53
MUC1-225ENST00000612778 U2AF1L5P0DN76 240 aaPredicted RBP18.34■□□□□ 0.53
MUC1-225ENST00000612778 U2AF1Q01081 240 aaKnown RBP eCLIP18.34■□□□□ 0.53
MUC1-225ENST00000612778 U2SURPO15042 1029 aaKnown RBP18.33■□□□□ 0.53
MUC1-225ENST00000612778 CCDC146Q8IYE0 955 aa18.33■□□□□ 0.53
MUC1-225ENST00000612778 SPATA31A3Q5VYP0 1347 aa18.32■□□□□ 0.52
MUC1-225ENST00000612778 PLEKHG5O94827 1062 aa18.32■□□□□ 0.52
MUC1-225ENST00000612778 IL13P35225 146 aa18.32■□□□□ 0.52
MUC1-225ENST00000612778 KCNH5Q8NCM2 988 aa18.32■□□□□ 0.52
MUC1-225ENST00000612778 USP19O94966 1318 aa18.31■□□□□ 0.52
MUC1-225ENST00000612778 SOS2Q07890 1332 aaPredicted RBP18.31■□□□□ 0.52
MUC1-225ENST00000612778 HSP90AB2PQ58FF8 381 aa18.31■□□□□ 0.52
MUC1-225ENST00000612778 TNS3Q68CZ2 1445 aa18.31■□□□□ 0.52
MUC1-225ENST00000612778 GCP02774 474 aa18.3■□□□□ 0.52
MUC1-225ENST00000612778 AMPHP49418 695 aa18.3■□□□□ 0.52
MUC1-225ENST00000612778 ALS2Q96Q42 1657 aa18.3■□□□□ 0.52
MUC1-225ENST00000612778 SALL2Q9Y467 1007 aaPredicted RBP18.3■□□□□ 0.52
MUC1-225ENST00000612778 PEAK1Q9H792 1746 aa18.29■□□□□ 0.52
MUC1-225ENST00000612778 NFAT5O94916 1531 aa18.29■□□□□ 0.52
MUC1-225ENST00000612778 FLT4P35916 1363 aa18.29■□□□□ 0.52
MUC1-225ENST00000612778 EIF4A2Q14240 407 aaKnown RBP18.28■□□□□ 0.52
MUC1-225ENST00000612778 SLIT3O75094 1523 aa18.28■□□□□ 0.52
MUC1-225ENST00000612778 APAF1O14727 1248 aa18.27■□□□□ 0.52
MUC1-225ENST00000612778 HOXC9P31274 260 aa18.27■□□□□ 0.52
MUC1-225ENST00000612778 RUNDC1Q96C34 613 aa18.27■□□□□ 0.52
MUC1-225ENST00000612778 ARHGEF10O15013 1369 aa18.27■□□□□ 0.52
MUC1-225ENST00000612778 KIF24Q5T7B8 1368 aa18.27■□□□□ 0.52
MUC1-225ENST00000612778 MED1Q15648 1581 aaPredicted RBP18.26■□□□□ 0.51
MUC1-225ENST00000612778 CABLES1Q8TDN4 633 aa18.26■□□□□ 0.51
MUC1-225ENST00000612778 ARHGEF25Q86VW2 580 aa18.25■□□□□ 0.51
MUC1-225ENST00000612778 ZBTB7CA1YPR0 619 aa18.24■□□□□ 0.51
MUC1-225ENST00000612778 TOM1O60784 492 aa18.24■□□□□ 0.51
MUC1-225ENST00000612778 PLEKHF1Q96S99 279 aa18.24■□□□□ 0.51
MUC1-225ENST00000612778 NHSL1Q5SYE7 1610 aa18.24■□□□□ 0.51
MUC1-225ENST00000612778 RTL1A6NKG5 1358 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms