RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 PAK3O75914 559 aaPredicted RBP25.52■■□□□ 1.68
SEMA3B-211ENST00000612509 CABP1Q9NZU7 370 aa25.52■■□□□ 1.68
SEMA3B-211ENST00000612509 USP6P35125 1406 aa25.52■■□□□ 1.68
SEMA3B-211ENST00000612509 CABLES1Q8TDN4 633 aa25.51■■□□□ 1.67
SEMA3B-211ENST00000612509 TESK2Q96S53 571 aa25.51■■□□□ 1.67
SEMA3B-211ENST00000612509 PLEKHG5O94827 1062 aa25.5■■□□□ 1.67
SEMA3B-211ENST00000612509 HAP1P54257 671 aaPredicted RBP25.5■■□□□ 1.67
SEMA3B-211ENST00000612509 NRKQ7Z2Y5 1582 aa25.5■■□□□ 1.67
SEMA3B-211ENST00000612509 NGLY1Q96IV0 654 aa25.5■■□□□ 1.67
SEMA3B-211ENST00000612509 PLCH1Q4KWH8 1693 aa25.49■■□□□ 1.67
SEMA3B-211ENST00000612509 MON2Q7Z3U7 1717 aa25.49■■□□□ 1.67
SEMA3B-211ENST00000612509 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.49■■□□□ 1.67
SEMA3B-211ENST00000612509 BRD4O60885 1362 aaPredicted RBP25.48■■□□□ 1.67
SEMA3B-211ENST00000612509 FNBP4Q8N3X1 1017 aaPredicted RBP25.46■■□□□ 1.67
SEMA3B-211ENST00000612509 SLIT2O94813 1529 aa25.46■■□□□ 1.67
SEMA3B-211ENST00000612509 PIK3C2AO00443 1686 aa25.45■■□□□ 1.66
SEMA3B-211ENST00000612509 CPSF1Q10570 1443 aaKnown RBP25.45■■□□□ 1.66
SEMA3B-211ENST00000612509 SSH2Q76I76 1423 aa25.45■■□□□ 1.66
SEMA3B-211ENST00000612509 NWD2Q9ULI1 1742 aa25.44■■□□□ 1.66
SEMA3B-211ENST00000612509 USP21Q9UK80 565 aa25.44■■□□□ 1.66
SEMA3B-211ENST00000612509 BCL9LQ86UU0 1499 aa25.44■■□□□ 1.66
SEMA3B-211ENST00000612509 CD163L1Q9NR16 1453 aa25.43■■□□□ 1.66
SEMA3B-211ENST00000612509 COL14A1Q05707 1796 aaKnown RBP25.42■■□□□ 1.66
SEMA3B-211ENST00000612509 SLC24A1O60721 1099 aa25.42■■□□□ 1.66
SEMA3B-211ENST00000612509 PUS7Q96PZ0 661 aaKnown RBP25.42■■□□□ 1.66
SEMA3B-211ENST00000612509 ATRNO75882 1429 aa25.42■■□□□ 1.66
SEMA3B-211ENST00000612509 NUTM2GQ5VZR2 741 aa25.41■■□□□ 1.66
SEMA3B-211ENST00000612509 NRAPQ86VF7 1730 aa25.4■■□□□ 1.66
SEMA3B-211ENST00000612509 ABTB2Q8N961 1025 aa25.4■■□□□ 1.66
SEMA3B-211ENST00000612509 USP19O94966 1318 aa25.39■■□□□ 1.66
SEMA3B-211ENST00000612509 CDK12Q9NYV4 1490 aaPredicted RBP25.39■■□□□ 1.65
SEMA3B-211ENST00000612509 ZNF692Q9BU19 519 aaPredicted RBP25.38■■□□□ 1.65
SEMA3B-211ENST00000612509 QTRT2Q9H974 415 aaKnown RBP25.38■■□□□ 1.65
SEMA3B-211ENST00000612509 TRPC5Q9UL62 973 aaPredicted RBP25.38■■□□□ 1.65
SEMA3B-211ENST00000612509 KTN1Q86UP2 1357 aaKnown RBP25.38■■□□□ 1.65
SEMA3B-211ENST00000612509 NINLQ9Y2I6 1382 aa25.38■■□□□ 1.65
SEMA3B-211ENST00000612509 RXRBP28702 533 aa25.37■■□□□ 1.65
SEMA3B-211ENST00000612509 TMF1P82094 1093 aa25.37■■□□□ 1.65
SEMA3B-211ENST00000612509 TMC1Q8TDI8 760 aa25.37■■□□□ 1.65
SEMA3B-211ENST00000612509 SLIT3O75094 1523 aa25.37■■□□□ 1.65
SEMA3B-211ENST00000612509 TTC21BQ7Z4L5 1316 aa25.36■■□□□ 1.65
SEMA3B-211ENST00000612509 A0A1W2PP64 1363 aa25.35■■□□□ 1.65
SEMA3B-211ENST00000612509 RGS12O14924 1447 aa25.35■■□□□ 1.65
SEMA3B-211ENST00000612509 RBM6P78332 1123 aaKnown RBP25.34■■□□□ 1.65
SEMA3B-211ENST00000612509 UNC5CLQ8IV45 518 aa25.34■■□□□ 1.65
SEMA3B-211ENST00000612509 SLC12A5Q9H2X9 1139 aa25.34■■□□□ 1.65
SEMA3B-211ENST00000612509 TTC21AQ8NDW8 1320 aa25.34■■□□□ 1.65
SEMA3B-211ENST00000612509 KIAA0232Q92628 1395 aa25.33■■□□□ 1.65
SEMA3B-211ENST00000612509 USP54Q70EL1 1684 aa25.33■■□□□ 1.65
SEMA3B-211ENST00000612509 FAM83GA6ND36 823 aa25.33■■□□□ 1.65
SEMA3B-211ENST00000612509 NLRP13Q86W25 1043 aa25.33■■□□□ 1.65
SEMA3B-211ENST00000612509 MYOM1P52179 1685 aa25.32■■□□□ 1.64
SEMA3B-211ENST00000612509 HDGFL2Q7Z4V5 671 aaPredicted RBP25.32■■□□□ 1.64
SEMA3B-211ENST00000612509 GLI3P10071 1580 aa25.31■■□□□ 1.64
SEMA3B-211ENST00000612509 EDC4Q6P2E9 1401 aaKnown RBP25.31■■□□□ 1.64
SEMA3B-211ENST00000612509 PRDM11Q9NQV5 511 aa25.31■■□□□ 1.64
SEMA3B-211ENST00000612509 TERF2IPQ9NYB0 399 aa25.3■■□□□ 1.64
SEMA3B-211ENST00000612509 NLRP6P59044 892 aa25.29■■□□□ 1.64
SEMA3B-211ENST00000612509 LMO7Q8WWI1 1683 aa25.29■■□□□ 1.64
SEMA3B-211ENST00000612509 CPDO75976 1380 aa25.29■■□□□ 1.64
SEMA3B-211ENST00000612509 EIF4G2P78344 907 aaKnown RBP eCLIP25.28■■□□□ 1.64
SEMA3B-211ENST00000612509 CDCA8Q53HL2 280 aa25.28■■□□□ 1.64
SEMA3B-211ENST00000612509 ANKRD36BQ8N2N9 1353 aa25.28■■□□□ 1.64
SEMA3B-211ENST00000612509 ZC3H6P61129 1189 aaKnown RBP25.27■■□□□ 1.64
SEMA3B-211ENST00000612509 BTG4Q9NY30 223 aa25.27■■□□□ 1.64
SEMA3B-211ENST00000612509 HSPA5P11021 654 aaKnown RBP25.26■■□□□ 1.63
SEMA3B-211ENST00000612509 GCP02774 474 aa25.25■■□□□ 1.63
SEMA3B-211ENST00000612509 VPS72Q15906 364 aa25.25■■□□□ 1.63
SEMA3B-211ENST00000612509 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.25■■□□□ 1.63
SEMA3B-211ENST00000612509 GJD4Q96KN9 370 aaPredicted RBP25.25■■□□□ 1.63
SEMA3B-211ENST00000612509 NFAT5O94916 1531 aa25.24■■□□□ 1.63
SEMA3B-211ENST00000612509 USP31Q70CQ4 1352 aa25.24■■□□□ 1.63
SEMA3B-211ENST00000612509 CHRNA2Q15822 529 aa25.24■■□□□ 1.63
SEMA3B-211ENST00000612509 NME9Q86XW9 330 aa25.21■■□□□ 1.63
SEMA3B-211ENST00000612509 OVOS2A0A0J9YW53 1432 aa25.2■■□□□ 1.63
SEMA3B-211ENST00000612509 OVOS2Q6IE36 1432 aa25.2■■□□□ 1.63
SEMA3B-211ENST00000612509 CAMTA1Q9Y6Y1 1673 aa25.2■■□□□ 1.63
SEMA3B-211ENST00000612509 ZRANB1Q9UGI0 708 aa25.19■■□□□ 1.62
SEMA3B-211ENST00000612509 CCDC9Q9Y3X0 531 aaKnown RBP25.19■■□□□ 1.62
SEMA3B-211ENST00000612509 COL18A1P39060 1754 aa25.18■■□□□ 1.62
SEMA3B-211ENST00000612509 KCNH5Q8NCM2 988 aa25.18■■□□□ 1.62
SEMA3B-211ENST00000612509 KIF20BQ96Q89 1820 aa25.17■■□□□ 1.62
SEMA3B-211ENST00000612509 COL5A2P05997 1499 aaPredicted RBP25.17■■□□□ 1.62
SEMA3B-211ENST00000612509 ABCC6O95255 1503 aa25.16■■□□□ 1.62
SEMA3B-211ENST00000612509 AATKQ6ZMQ8 1374 aa25.16■■□□□ 1.62
SEMA3B-211ENST00000612509 ZBTB7CA1YPR0 619 aa25.15■■□□□ 1.62
SEMA3B-211ENST00000612509 SOX12O15370 315 aa25.15■■□□□ 1.62
SEMA3B-211ENST00000612509 LTN1O94822 1766 aa25.15■■□□□ 1.62
SEMA3B-211ENST00000612509 STRN4Q9NRL3 753 aa25.14■■□□□ 1.62
SEMA3B-211ENST00000612509 SPATA31A5Q5VU36 1347 aa25.13■■□□□ 1.61
SEMA3B-211ENST00000612509 SPATA31A7Q8IWB4 1347 aa25.13■■□□□ 1.61
SEMA3B-211ENST00000612509 BRWD3Q6RI45 1802 aa25.13■■□□□ 1.61
SEMA3B-211ENST00000612509 THSD7AQ9UPZ6 1657 aa25.13■■□□□ 1.61
SEMA3B-211ENST00000612509 ARHGEF25Q86VW2 580 aa25.12■■□□□ 1.61
SEMA3B-211ENST00000612509 POLR3GLQ9BT43 218 aa25.12■■□□□ 1.61
SEMA3B-211ENST00000612509 RGPD5Q99666 1765 aa25.11■■□□□ 1.61
SEMA3B-211ENST00000612509 NSD3Q9BZ95 1437 aa25.11■■□□□ 1.61
SEMA3B-211ENST00000612509 SPATA31A1Q5TZJ5 1347 aa25.09■■□□□ 1.61
SEMA3B-211ENST00000612509 EVA1CP58658 441 aa25.08■■□□□ 1.61
SEMA3B-211ENST00000612509 ONECUT3O60422 494 aaPredicted RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms