RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 COL14A1Q05707 1796 aaKnown RBP25.79■■□□□ 1.72
SSBP1-215ENST00000612337 PAK3O75914 559 aaPredicted RBP25.79■■□□□ 1.72
SSBP1-215ENST00000612337 CDK19Q9BWU1 502 aa25.79■■□□□ 1.72
SSBP1-215ENST00000612337 CRYBG1Q9Y4K1 1723 aa25.79■■□□□ 1.72
SSBP1-215ENST00000612337 BTG4Q9NY30 223 aa25.78■■□□□ 1.72
SSBP1-215ENST00000612337 BLMP54132 1417 aaPredicted RBP25.77■■□□□ 1.72
SSBP1-215ENST00000612337 NBPF1Q3BBV0 1214 aa25.76■■□□□ 1.71
SSBP1-215ENST00000612337 TOPAZ1Q8N9V7 1692 aa25.75■■□□□ 1.71
SSBP1-215ENST00000612337 POLR3AO14802 1390 aaPredicted RBP25.74■■□□□ 1.71
SSBP1-215ENST00000612337 ZRANB1Q9UGI0 708 aa25.74■■□□□ 1.71
SSBP1-215ENST00000612337 CCDC61Q9Y6R9 512 aa25.73■■□□□ 1.71
SSBP1-215ENST00000612337 KRT27Q7Z3Y8 459 aa25.72■■□□□ 1.71
SSBP1-215ENST00000612337 ACEP12821 1306 aa25.71■■□□□ 1.71
SSBP1-215ENST00000612337 PLEKHG3A1L390 1219 aa25.7■■□□□ 1.7
SSBP1-215ENST00000612337 FAM98CQ17RN3 349 aaKnown RBP25.7■■□□□ 1.7
SSBP1-215ENST00000612337 PRDM11Q9NQV5 511 aa25.7■■□□□ 1.7
SSBP1-215ENST00000612337 NBPF8Q3BBV2 869 aa25.69■■□□□ 1.7
SSBP1-215ENST00000612337 PHRF1Q9P1Y6 1649 aaKnown RBP25.68■■□□□ 1.7
SSBP1-215ENST00000612337 A0A0G2JS52 829 aa25.68■■□□□ 1.7
SSBP1-215ENST00000612337 MYT1Q01538 1121 aa25.68■■□□□ 1.7
SSBP1-215ENST00000612337 SPATA31A5Q5VU36 1347 aa25.67■■□□□ 1.7
SSBP1-215ENST00000612337 SPATA31A7Q8IWB4 1347 aa25.67■■□□□ 1.7
SSBP1-215ENST00000612337 CENPJQ9HC77 1338 aaPredicted RBP25.67■■□□□ 1.7
SSBP1-215ENST00000612337 SF3B2Q13435 895 aaKnown RBP25.67■■□□□ 1.7
SSBP1-215ENST00000612337 KIAA0232Q92628 1395 aa25.67■■□□□ 1.7
SSBP1-215ENST00000612337 NUTM2GQ5VZR2 741 aa25.64■■□□□ 1.7
SSBP1-215ENST00000612337 DEFB132Q7Z7B7 95 aa25.64■■□□□ 1.7
SSBP1-215ENST00000612337 L3MBTL2Q969R5 705 aa25.64■■□□□ 1.7
SSBP1-215ENST00000612337 SRPK2P78362 688 aaKnown RBP25.63■■□□□ 1.69
SSBP1-215ENST00000612337 PPIP5K1Q6PFW1 1433 aa25.62■■□□□ 1.69
SSBP1-215ENST00000612337 QRICH2Q9H0J4 1663 aa25.61■■□□□ 1.69
SSBP1-215ENST00000612337 ZC3H6P61129 1189 aaKnown RBP25.61■■□□□ 1.69
SSBP1-215ENST00000612337 CHRNA2Q15822 529 aa25.61■■□□□ 1.69
SSBP1-215ENST00000612337 ABTB2Q8N961 1025 aa25.61■■□□□ 1.69
SSBP1-215ENST00000612337 THSD7AQ9UPZ6 1657 aa25.61■■□□□ 1.69
SSBP1-215ENST00000612337 CABP2Q9NPB3 220 aa25.6■■□□□ 1.69
SSBP1-215ENST00000612337 NRKQ7Z2Y5 1582 aa25.59■■□□□ 1.69
SSBP1-215ENST00000612337 SPATA31A1Q5TZJ5 1347 aa25.59■■□□□ 1.69
SSBP1-215ENST00000612337 SIN3AQ96ST3 1273 aa25.58■■□□□ 1.69
SSBP1-215ENST00000612337 USP19O94966 1318 aa25.58■■□□□ 1.69
SSBP1-215ENST00000612337 TRPM1Q7Z4N2 1603 aa25.57■■□□□ 1.68
SSBP1-215ENST00000612337 BRD4O60885 1362 aaPredicted RBP25.56■■□□□ 1.68
SSBP1-215ENST00000612337 STRN4Q9NRL3 753 aa25.56■■□□□ 1.68
SSBP1-215ENST00000612337 CPDO75976 1380 aa25.56■■□□□ 1.68
SSBP1-215ENST00000612337 BAG6P46379 1132 aa25.54■■□□□ 1.68
SSBP1-215ENST00000612337 NLRP13Q86W25 1043 aa25.54■■□□□ 1.68
SSBP1-215ENST00000612337 CABP1Q9NZU7 370 aa25.53■■□□□ 1.68
SSBP1-215ENST00000612337 SSH2Q76I76 1423 aa25.53■■□□□ 1.68
SSBP1-215ENST00000612337 RGPD1P0DJD0 1748 aa25.52■■□□□ 1.68
SSBP1-215ENST00000612337 FAM182BQ5T319 152 aa25.52■■□□□ 1.68
SSBP1-215ENST00000612337 LMO7Q8WWI1 1683 aa25.52■■□□□ 1.68
SSBP1-215ENST00000612337 CAMTA1Q9Y6Y1 1673 aa25.52■■□□□ 1.68
SSBP1-215ENST00000612337 GCP02774 474 aa25.51■■□□□ 1.67
SSBP1-215ENST00000612337 EVA1CP58658 441 aa25.51■■□□□ 1.67
SSBP1-215ENST00000612337 NEUROD1Q13562 356 aa25.51■■□□□ 1.67
SSBP1-215ENST00000612337 EVC2Q86UK5 1308 aa25.51■■□□□ 1.67
SSBP1-215ENST00000612337 USP6P35125 1406 aa25.51■■□□□ 1.67
SSBP1-215ENST00000612337 ROCK2O75116 1388 aaKnown RBP25.5■■□□□ 1.67
SSBP1-215ENST00000612337 BARGINQ6ZT62 677 aa25.49■■□□□ 1.67
SSBP1-215ENST00000612337 USP35Q9P2H5 1018 aa25.48■■□□□ 1.67
SSBP1-215ENST00000612337 LARP1Q6PKG0 1096 aaKnown RBP25.47■■□□□ 1.67
SSBP1-215ENST00000612337 DISP2A7MBM2 1401 aa25.46■■□□□ 1.67
SSBP1-215ENST00000612337 NLRP6P59044 892 aa25.45■■□□□ 1.66
SSBP1-215ENST00000612337 EN1Q05925 392 aaPredicted RBP25.45■■□□□ 1.66
SSBP1-215ENST00000612337 FAM196AQ6ZSG2 479 aa25.45■■□□□ 1.66
SSBP1-215ENST00000612337 TNS1Q9HBL0 1735 aaKnown RBP25.45■■□□□ 1.66
SSBP1-215ENST00000612337 TCP11L2Q8N4U5 519 aa25.44■■□□□ 1.66
SSBP1-215ENST00000612337 SLIT3O75094 1523 aa25.43■■□□□ 1.66
SSBP1-215ENST00000612337 COL5A2P05997 1499 aaPredicted RBP25.43■■□□□ 1.66
SSBP1-215ENST00000612337 THRAP3Q9Y2W1 955 aaKnown RBP25.42■■□□□ 1.66
SSBP1-215ENST00000612337 PIK3C2AO00443 1686 aa25.42■■□□□ 1.66
SSBP1-215ENST00000612337 PDE3BQ13370 1112 aa25.41■■□□□ 1.66
SSBP1-215ENST00000612337 ZNF692Q9BU19 519 aaPredicted RBP25.41■■□□□ 1.66
SSBP1-215ENST00000612337 AATKQ6ZMQ8 1374 aa25.4■■□□□ 1.66
SSBP1-215ENST00000612337 TRIM37O94972 964 aa25.39■■□□□ 1.66
SSBP1-215ENST00000612337 AKAP12Q02952 1782 aa25.39■■□□□ 1.65
SSBP1-215ENST00000612337 TTC21BQ7Z4L5 1316 aa25.37■■□□□ 1.65
SSBP1-215ENST00000612337 CRB1P82279 1406 aa25.37■■□□□ 1.65
SSBP1-215ENST00000612337 PSDA5PKW4 1024 aaPredicted RBP25.37■■□□□ 1.65
SSBP1-215ENST00000612337 LRP5O75197 1615 aa25.37■■□□□ 1.65
SSBP1-215ENST00000612337 ZBTB7CA1YPR0 619 aa25.36■■□□□ 1.65
SSBP1-215ENST00000612337 PARP4Q9UKK3 1724 aaKnown RBP25.36■■□□□ 1.65
SSBP1-215ENST00000612337 SBNO2Q9Y2G9 1366 aa25.35■■□□□ 1.65
SSBP1-215ENST00000612337 EZH2Q15910 746 aaKnown RBP25.35■■□□□ 1.65
SSBP1-215ENST00000612337 CAMKK2Q96RR4 588 aa25.35■■□□□ 1.65
SSBP1-215ENST00000612337 CPSF1Q10570 1443 aaKnown RBP25.35■■□□□ 1.65
SSBP1-215ENST00000612337 COL18A1P39060 1754 aa25.34■■□□□ 1.65
SSBP1-215ENST00000612337 TTC21AQ8NDW8 1320 aa25.34■■□□□ 1.65
SSBP1-215ENST00000612337 PARD3Q8TEW0 1356 aa25.32■■□□□ 1.64
SSBP1-215ENST00000612337 APBA3O96018 575 aa25.32■■□□□ 1.64
SSBP1-215ENST00000612337 CARD11Q9BXL7 1154 aa25.32■■□□□ 1.64
SSBP1-215ENST00000612337 KCNH5Q8NCM2 988 aa25.31■■□□□ 1.64
SSBP1-215ENST00000612337 KTN1Q86UP2 1357 aaKnown RBP25.31■■□□□ 1.64
SSBP1-215ENST00000612337 ARHGEF25Q86VW2 580 aa25.3■■□□□ 1.64
SSBP1-215ENST00000612337 AXIN2Q9Y2T1 843 aa25.3■■□□□ 1.64
SSBP1-215ENST00000612337 C11orf95C9JLR9 678 aaPredicted RBP25.29■■□□□ 1.64
SSBP1-215ENST00000612337 R3HDM1Q15032 1099 aaKnown RBP25.29■■□□□ 1.64
SSBP1-215ENST00000612337 TOM1L2Q6ZVM7 507 aa25.29■■□□□ 1.64
SSBP1-215ENST00000612337 WDR17Q8IZU2 1322 aa25.28■■□□□ 1.64
SSBP1-215ENST00000612337 MON2Q7Z3U7 1717 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms