RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 PMFBP1Q8TBY8 1022 aa17.96■□□□□ 0.47
NEAT1-204ENST00000612303 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.46
NEAT1-204ENST00000612303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.95■□□□□ 0.46
NEAT1-204ENST00000612303 GGNBP2Q9H3C7 697 aa17.95■□□□□ 0.46
NEAT1-204ENST00000612303 C1orf167Q5SNV9 1468 aa17.94■□□□□ 0.46
NEAT1-204ENST00000612303 ESCO1Q5FWF5 840 aa17.93■□□□□ 0.46
NEAT1-204ENST00000612303 KIF1AQ12756 1690 aa17.93■□□□□ 0.46
NEAT1-204ENST00000612303 MST1RQ04912 1400 aa17.92■□□□□ 0.46
NEAT1-204ENST00000612303 YTHDC1Q96MU7 727 aaKnown RBP17.92■□□□□ 0.46
NEAT1-204ENST00000612303 NME9Q86XW9 330 aa17.91■□□□□ 0.46
NEAT1-204ENST00000612303 COG3Q96JB2 828 aa17.91■□□□□ 0.46
NEAT1-204ENST00000612303 INSRP06213 1382 aa17.91■□□□□ 0.46
NEAT1-204ENST00000612303 FAM9BQ8IZU0 186 aa17.9■□□□□ 0.46
NEAT1-204ENST00000612303 USP31Q70CQ4 1352 aa17.9■□□□□ 0.46
NEAT1-204ENST00000612303 ORAI2Q96SN7 254 aa17.89■□□□□ 0.45
NEAT1-204ENST00000612303 AATKQ6ZMQ8 1374 aa17.89■□□□□ 0.45
NEAT1-204ENST00000612303 TNNT2P45379 298 aaPredicted RBP17.88■□□□□ 0.45
NEAT1-204ENST00000612303 MTHFSP49914 203 aa17.88■□□□□ 0.45
NEAT1-204ENST00000612303 PSME1Q06323 249 aa17.88■□□□□ 0.45
NEAT1-204ENST00000612303 CFAP53Q96M91 514 aa17.88■□□□□ 0.45
NEAT1-204ENST00000612303 OVOS2A0A0J9YW53 1432 aa17.87■□□□□ 0.45
NEAT1-204ENST00000612303 OVOS2Q6IE36 1432 aa17.87■□□□□ 0.45
NEAT1-204ENST00000612303 MAP2P11137 1827 aaKnown RBP17.86■□□□□ 0.45
NEAT1-204ENST00000612303 CENPBP07199 599 aaPredicted RBP17.86■□□□□ 0.45
NEAT1-204ENST00000612303 USP54Q70EL1 1684 aa17.86■□□□□ 0.45
NEAT1-204ENST00000612303 AEBP2Q6ZN18 517 aaPredicted RBP17.85■□□□□ 0.45
NEAT1-204ENST00000612303 LTBP4Q8N2S1 1624 aa17.84■□□□□ 0.45
NEAT1-204ENST00000612303 ZRANB1Q9UGI0 708 aa17.84■□□□□ 0.45
NEAT1-204ENST00000612303 FOXO3O43524 673 aa17.83■□□□□ 0.44
NEAT1-204ENST00000612303 WDR43Q15061 677 aaKnown RBP eCLIP17.83■□□□□ 0.44
NEAT1-204ENST00000612303 SLAIN2Q9P270 581 aa17.83■□□□□ 0.44
NEAT1-204ENST00000612303 PIK3C2AO00443 1686 aa17.83■□□□□ 0.44
NEAT1-204ENST00000612303 PNPLA6Q8IY17 1366 aa17.82■□□□□ 0.44
NEAT1-204ENST00000612303 KRT28Q7Z3Y7 464 aa17.82■□□□□ 0.44
NEAT1-204ENST00000612303 POLKQ9UBT6 870 aa17.82■□□□□ 0.44
NEAT1-204ENST00000612303 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
NEAT1-204ENST00000612303 NPHP3Q7Z494 1330 aa17.81■□□□□ 0.44
NEAT1-204ENST00000612303 PAK3O75914 559 aaPredicted RBP17.81■□□□□ 0.44
NEAT1-204ENST00000612303 ABTB2Q8N961 1025 aa17.81■□□□□ 0.44
NEAT1-204ENST00000612303 TRPM3Q9HCF6 1732 aaPredicted RBP17.81■□□□□ 0.44
NEAT1-204ENST00000612303 NLRP6P59044 892 aa17.8■□□□□ 0.44
NEAT1-204ENST00000612303 HNRNPUQ00839 825 aaKnown RBP eCLIP17.8■□□□□ 0.445e-59■□□□□ 9.1
NEAT1-204ENST00000612303 ADAMTS8Q9UP79 889 aa17.8■□□□□ 0.44
NEAT1-204ENST00000612303 SBNO1A3KN83 1393 aa17.79■□□□□ 0.44
NEAT1-204ENST00000612303 NUDCQ9Y266 331 aa17.78■□□□□ 0.44
NEAT1-204ENST00000612303 MARF1Q9Y4F3 1742 aaKnown RBP17.78■□□□□ 0.44
NEAT1-204ENST00000612303 SHPRHQ149N8 1683 aa17.77■□□□□ 0.44
NEAT1-204ENST00000612303 COL3A1P02461 1466 aaPredicted RBP17.77■□□□□ 0.44
NEAT1-204ENST00000612303 CDK12Q9NYV4 1490 aaPredicted RBP17.77■□□□□ 0.44
NEAT1-204ENST00000612303 BRINP3Q76B58 766 aa17.77■□□□□ 0.44
NEAT1-204ENST00000612303 BLMP54132 1417 aaPredicted RBP17.77■□□□□ 0.44
NEAT1-204ENST00000612303 KIF24Q5T7B8 1368 aa17.76■□□□□ 0.43
NEAT1-204ENST00000612303 DIAPH1O60610 1272 aaKnown RBP17.75■□□□□ 0.43
NEAT1-204ENST00000612303 ZBED9Q6R2W3 1325 aa17.74■□□□□ 0.43
NEAT1-204ENST00000612303 ALS2Q96Q42 1657 aa17.74■□□□□ 0.43
NEAT1-204ENST00000612303 FBLN1P23142 703 aa17.74■□□□□ 0.43
NEAT1-204ENST00000612303 KCNH5Q8NCM2 988 aa17.74■□□□□ 0.43
NEAT1-204ENST00000612303 EMILIN1Q9Y6C2 1016 aa17.74■□□□□ 0.43
NEAT1-204ENST00000612303 XPCQ01831 940 aaPredicted RBP17.73■□□□□ 0.43
NEAT1-204ENST00000612303 RRS1Q15050 365 aaKnown RBP17.73■□□□□ 0.43
NEAT1-204ENST00000612303 PXDNQ92626 1479 aa17.73■□□□□ 0.43
NEAT1-204ENST00000612303 PPM1GO15355 546 aaPredicted RBP17.72■□□□□ 0.43
NEAT1-204ENST00000612303 NUTM2GQ5VZR2 741 aa17.72■□□□□ 0.43
NEAT1-204ENST00000612303 USP19O94966 1318 aa17.72■□□□□ 0.43
NEAT1-204ENST00000612303 SOS2Q07890 1332 aaPredicted RBP17.72■□□□□ 0.43
NEAT1-204ENST00000612303 NGEFQ8N5V2 710 aa17.71■□□□□ 0.43
NEAT1-204ENST00000612303 SLIT3O75094 1523 aa17.71■□□□□ 0.43
NEAT1-204ENST00000612303 MAP3K19Q56UN5 1328 aa17.71■□□□□ 0.42
NEAT1-204ENST00000612303 SPATA31A3Q5VYP0 1347 aa17.71■□□□□ 0.42
NEAT1-204ENST00000612303 TNS3Q68CZ2 1445 aa17.7■□□□□ 0.42
NEAT1-204ENST00000612303 NHSL1Q5SYE7 1610 aa17.69■□□□□ 0.42
NEAT1-204ENST00000612303 ARHGEF10O15013 1369 aa17.69■□□□□ 0.42
NEAT1-204ENST00000612303 U2AF1L5P0DN76 240 aaPredicted RBP17.69■□□□□ 0.42
NEAT1-204ENST00000612303 IL13P35225 146 aa17.69■□□□□ 0.42
NEAT1-204ENST00000612303 U2AF1Q01081 240 aaKnown RBP eCLIP17.69■□□□□ 0.421e-323■□□□□ 9
NEAT1-204ENST00000612303 PNNQ9H307 717 aaKnown RBP17.69■□□□□ 0.42
NEAT1-204ENST00000612303 FLT4P35916 1363 aa17.68■□□□□ 0.42
NEAT1-204ENST00000612303 NFAT5O94916 1531 aa17.68■□□□□ 0.42
NEAT1-204ENST00000612303 DDX17Q92841 729 aaKnown RBP17.68■□□□□ 0.42
NEAT1-204ENST00000612303 RUNDC1Q96C34 613 aa17.68■□□□□ 0.42
NEAT1-204ENST00000612303 RTL1A6NKG5 1358 aa17.67■□□□□ 0.42
NEAT1-204ENST00000612303 PEAK1Q9H792 1746 aa17.67■□□□□ 0.42
NEAT1-204ENST00000612303 GCP02774 474 aa17.67■□□□□ 0.42
NEAT1-204ENST00000612303 AMPHP49418 695 aa17.67■□□□□ 0.42
NEAT1-204ENST00000612303 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
NEAT1-204ENST00000612303 LMOD2Q6P5Q4 547 aa17.67■□□□□ 0.42
NEAT1-204ENST00000612303 PHRF1Q9P1Y6 1649 aaKnown RBP17.67■□□□□ 0.42
NEAT1-204ENST00000612303 IQSEC2Q5JU85 1478 aa17.67■□□□□ 0.42
NEAT1-204ENST00000612303 U2SURPO15042 1029 aaKnown RBP17.66■□□□□ 0.42
NEAT1-204ENST00000612303 SOX12O15370 315 aa17.66■□□□□ 0.42
NEAT1-204ENST00000612303 FCHSD2O94868 740 aa17.66■□□□□ 0.42
NEAT1-204ENST00000612303 LTN1O94822 1766 aa17.65■□□□□ 0.42
NEAT1-204ENST00000612303 TOM1O60784 492 aa17.64■□□□□ 0.41
NEAT1-204ENST00000612303 PDE3BQ13370 1112 aa17.64■□□□□ 0.41
NEAT1-204ENST00000612303 EIF4A2Q14240 407 aaKnown RBP17.64■□□□□ 0.41
NEAT1-204ENST00000612303 HSP90AB2PQ58FF8 381 aa17.64■□□□□ 0.41
NEAT1-204ENST00000612303 IP6K1Q92551 441 aa17.64■□□□□ 0.41
NEAT1-204ENST00000612303 MED1Q15648 1581 aaPredicted RBP17.64■□□□□ 0.41
NEAT1-204ENST00000612303 HOXC9P31274 260 aa17.63■□□□□ 0.41
NEAT1-204ENST00000612303 ARHGEF25Q86VW2 580 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms