RNA–Protein interactions for RNA: ENST00000612094.1

PDE4DIP-239, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 5

Gene PDE4DIP, Length 3,451 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-239ENST00000612094 HOXD11P31277 338 aaPredicted RBP11.01□□□□□ -0.65
PDE4DIP-239ENST00000612094 ERICH6BQ5W0A0 696 aa11.01□□□□□ -0.65
PDE4DIP-239ENST00000612094 SETD1BQ9UPS6 1966 aaKnown RBP11□□□□□ -0.65
PDE4DIP-239ENST00000612094 ZNF326Q5BKZ1 582 aaKnown RBP11□□□□□ -0.65
PDE4DIP-239ENST00000612094 ERICH6Q7L0X2 663 aa11□□□□□ -0.65
PDE4DIP-239ENST00000612094 CDK12Q9NYV4 1490 aaPredicted RBP10.99□□□□□ -0.65
PDE4DIP-239ENST00000612094 MKRN4PQ13434 485 aaPredicted RBP10.99□□□□□ -0.65
PDE4DIP-239ENST00000612094 CDCA8Q53HL2 280 aa10.99□□□□□ -0.65
PDE4DIP-239ENST00000612094 ABCA3Q99758 1704 aa10.99□□□□□ -0.65
PDE4DIP-239ENST00000612094 OVOS2A0A0J9YW53 1432 aa10.99□□□□□ -0.65
PDE4DIP-239ENST00000612094 OVOS2Q6IE36 1432 aa10.99□□□□□ -0.65
PDE4DIP-239ENST00000612094 KIF1AQ12756 1690 aa10.98□□□□□ -0.65
PDE4DIP-239ENST00000612094 MRS2Q9HD23 443 aa10.98□□□□□ -0.65
PDE4DIP-239ENST00000612094 ATAD2Q6PL18 1390 aa10.97□□□□□ -0.65
PDE4DIP-239ENST00000612094 DNAJC5Q9H3Z4 198 aa10.97□□□□□ -0.65
PDE4DIP-239ENST00000612094 COL18A1P39060 1754 aa10.97□□□□□ -0.65
PDE4DIP-239ENST00000612094 TUBGCP6Q96RT7 1819 aa10.97□□□□□ -0.65
PDE4DIP-239ENST00000612094 LMTK3Q96Q04 1460 aa10.96□□□□□ -0.65
PDE4DIP-239ENST00000612094 PIK3R4Q99570 1358 aa10.96□□□□□ -0.65
PDE4DIP-239ENST00000612094 ROBO2Q9HCK4 1378 aa10.96□□□□□ -0.66
PDE4DIP-239ENST00000612094 EDC4Q6P2E9 1401 aaKnown RBP10.95□□□□□ -0.66
PDE4DIP-239ENST00000612094 NFAT5O94916 1531 aa10.95□□□□□ -0.66
PDE4DIP-239ENST00000612094 MED1Q15648 1581 aaPredicted RBP10.95□□□□□ -0.66
PDE4DIP-239ENST00000612094 RGPD2P0DJD1 1756 aa10.95□□□□□ -0.66
PDE4DIP-239ENST00000612094 PROM2Q8N271 834 aa10.94□□□□□ -0.66
PDE4DIP-239ENST00000612094 ARID3AQ99856 593 aa10.94□□□□□ -0.66
PDE4DIP-239ENST00000612094 NUDCQ9Y266 331 aa10.94□□□□□ -0.66
PDE4DIP-239ENST00000612094 AATKQ6ZMQ8 1374 aa10.94□□□□□ -0.66
PDE4DIP-239ENST00000612094 KDM3BQ7LBC6 1761 aa10.94□□□□□ -0.66
PDE4DIP-239ENST00000612094 FAM208AQ9UK61 1670 aaKnown RBP10.94□□□□□ -0.66
PDE4DIP-239ENST00000612094 SLIT3O75094 1523 aa10.94□□□□□ -0.66
PDE4DIP-239ENST00000612094 BRPF1P55201 1214 aaPredicted RBP10.93□□□□□ -0.66
PDE4DIP-239ENST00000612094 ANKARQ7Z5J8 1434 aa10.93□□□□□ -0.66
PDE4DIP-239ENST00000612094 ABCC6O95255 1503 aa10.93□□□□□ -0.66
PDE4DIP-239ENST00000612094 PPIP5K1Q6PFW1 1433 aa10.93□□□□□ -0.66
PDE4DIP-239ENST00000612094 TMEM132EQ6IEE7 984 aa10.93□□□□□ -0.66
PDE4DIP-239ENST00000612094 NCAPD2Q15021 1401 aa10.93□□□□□ -0.66
PDE4DIP-239ENST00000612094 USP31Q70CQ4 1352 aa10.92□□□□□ -0.66
PDE4DIP-239ENST00000612094 PDE3BQ13370 1112 aa10.92□□□□□ -0.66
PDE4DIP-239ENST00000612094 HNRNPUQ00839 825 aaKnown RBP eCLIP10.91□□□□□ -0.66
PDE4DIP-239ENST00000612094 EVC2Q86UK5 1308 aa10.91□□□□□ -0.66
PDE4DIP-239ENST00000612094 SHANK3Q9BYB0 1731 aa10.9□□□□□ -0.67
PDE4DIP-239ENST00000612094 PLEKHF1Q96S99 279 aa10.89□□□□□ -0.67
PDE4DIP-239ENST00000612094 RGPD5Q99666 1765 aa10.89□□□□□ -0.67
PDE4DIP-239ENST00000612094 PARP4Q9UKK3 1724 aaKnown RBP10.89□□□□□ -0.67
PDE4DIP-239ENST00000612094 PRR36Q9H6K5 1346 aa10.88□□□□□ -0.67
PDE4DIP-239ENST00000612094 WNK3Q9BYP7 1800 aa10.88□□□□□ -0.67
PDE4DIP-239ENST00000612094 LTKP29376 864 aa10.88□□□□□ -0.67
PDE4DIP-239ENST00000612094 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.88□□□□□ -0.67
PDE4DIP-239ENST00000612094 CCDC27Q2M243 656 aa10.88□□□□□ -0.67
PDE4DIP-239ENST00000612094 TRAK1Q9UPV9 953 aa10.88□□□□□ -0.67
PDE4DIP-239ENST00000612094 USP6P35125 1406 aa10.87□□□□□ -0.67
PDE4DIP-239ENST00000612094 PKD1L3Q7Z443 1732 aa10.87□□□□□ -0.67
PDE4DIP-239ENST00000612094 GLI3P10071 1580 aa10.87□□□□□ -0.67
PDE4DIP-239ENST00000612094 ADAMTS8Q9UP79 889 aa10.87□□□□□ -0.67
PDE4DIP-239ENST00000612094 CACNA1FO60840 1977 aa10.86□□□□□ -0.67
PDE4DIP-239ENST00000612094 DUSP27Q5VZP5 1158 aa10.86□□□□□ -0.67
PDE4DIP-239ENST00000612094 SLC12A5Q9H2X9 1139 aa10.86□□□□□ -0.67
PDE4DIP-239ENST00000612094 CGNL1Q0VF96 1302 aa10.85□□□□□ -0.67
PDE4DIP-239ENST00000612094 NHSL1Q5SYE7 1610 aa10.85□□□□□ -0.67
PDE4DIP-239ENST00000612094 FAM9BQ8IZU0 186 aa10.85□□□□□ -0.67
PDE4DIP-239ENST00000612094 NGEFQ8N5V2 710 aa10.85□□□□□ -0.67
PDE4DIP-239ENST00000612094 PAPPAQ13219 1627 aa10.84□□□□□ -0.67
PDE4DIP-239ENST00000612094 PRAM1Q96QH2 718 aa10.84□□□□□ -0.67
PDE4DIP-239ENST00000612094 CC2D1BQ5T0F9 858 aaKnown RBP10.84□□□□□ -0.67
PDE4DIP-239ENST00000612094 FYB1O15117 783 aa10.83□□□□□ -0.67
PDE4DIP-239ENST00000612094 ZNF219Q9P2Y4 722 aaPredicted RBP10.83□□□□□ -0.67
PDE4DIP-239ENST00000612094 KNSTRNQ9Y448 316 aa10.83□□□□□ -0.68
PDE4DIP-239ENST00000612094 SLFN5Q08AF3 891 aa10.82□□□□□ -0.68
PDE4DIP-239ENST00000612094 TMC1Q8TDI8 760 aa10.82□□□□□ -0.68
PDE4DIP-239ENST00000612094 TBX22Q9Y458 520 aa10.82□□□□□ -0.68
PDE4DIP-239ENST00000612094 PLEKHG3A1L390 1219 aa10.82□□□□□ -0.68
PDE4DIP-239ENST00000612094 WASLO00401 505 aaPredicted RBP10.81□□□□□ -0.68
PDE4DIP-239ENST00000612094 SPOCK2Q92563 424 aa10.81□□□□□ -0.68
PDE4DIP-239ENST00000612094 SCN11AQ9UI33 1791 aa10.81□□□□□ -0.68
PDE4DIP-239ENST00000612094 SPINK5Q9NQ38 1064 aaPredicted RBP10.81□□□□□ -0.68
PDE4DIP-239ENST00000612094 NKX1-1Q15270 411 aaPredicted RBP10.81□□□□□ -0.68
PDE4DIP-239ENST00000612094 DMRT2Q9Y5R5 561 aa10.81□□□□□ -0.68
PDE4DIP-239ENST00000612094 CDK19Q9BWU1 502 aa10.8□□□□□ -0.68
PDE4DIP-239ENST00000612094 CABP2Q9NPB3 220 aa10.8□□□□□ -0.68
PDE4DIP-239ENST00000612094 ADGRL3Q9HAR2 1447 aa10.8□□□□□ -0.68
PDE4DIP-239ENST00000612094 UBR2Q8IWV8 1755 aa10.8□□□□□ -0.68
PDE4DIP-239ENST00000612094 PLCH1Q4KWH8 1693 aa10.79□□□□□ -0.68
PDE4DIP-239ENST00000612094 NUTM2DQ5VT03 806 aaPredicted RBP10.78□□□□□ -0.68
PDE4DIP-239ENST00000612094 KDM2BQ8NHM5 1336 aa10.78□□□□□ -0.68
PDE4DIP-239ENST00000612094 NCOA3Q9Y6Q9 1424 aa10.78□□□□□ -0.68
PDE4DIP-239ENST00000612094 RRP1P56182 461 aaKnown RBP10.78□□□□□ -0.68
PDE4DIP-239ENST00000612094 CDCA7LQ96GN5 454 aa10.78□□□□□ -0.68
PDE4DIP-239ENST00000612094 MYT1LQ9UL68 1186 aa10.78□□□□□ -0.68
PDE4DIP-239ENST00000612094 KDRP35968 1356 aa10.77□□□□□ -0.68
PDE4DIP-239ENST00000612094 COL22A1Q8NFW1 1626 aaPredicted RBP10.77□□□□□ -0.69
PDE4DIP-239ENST00000612094 KIF24Q5T7B8 1368 aa10.76□□□□□ -0.69
PDE4DIP-239ENST00000612094 DCCP43146 1447 aa10.76□□□□□ -0.69
PDE4DIP-239ENST00000612094 NEUROD2Q15784 382 aa10.76□□□□□ -0.69
PDE4DIP-239ENST00000612094 WAPLQ7Z5K2 1190 aa10.76□□□□□ -0.69
PDE4DIP-239ENST00000612094 LAMB4A4D0S4 1761 aa10.75□□□□□ -0.69
PDE4DIP-239ENST00000612094 PPP4R2Q9NY27 417 aa10.75□□□□□ -0.69
PDE4DIP-239ENST00000612094 U3KPZ7 1027 aaPredicted RBP10.75□□□□□ -0.69
PDE4DIP-239ENST00000612094 C1orf115Q9H7X2 142 aa10.74□□□□□ -0.69
PDE4DIP-239ENST00000612094 NPHP4O75161 1426 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms