RNA–Protein interactions for RNA: ENST00000612011.1

PVT1-221, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 169 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-221ENST00000612011 NSD2O96028 1365 aa13.86□□□□□ -0.19
PVT1-221ENST00000612011 NPC1L1Q9UHC9 1359 aa13.86□□□□□ -0.19
PVT1-221ENST00000612011 SLAIN2Q9P270 581 aa13.86□□□□□ -0.19
PVT1-221ENST00000612011 AHDC1Q5TGY3 1603 aaPredicted RBP13.86□□□□□ -0.19
PVT1-221ENST00000612011 PHRF1Q9P1Y6 1649 aaKnown RBP13.86□□□□□ -0.19
PVT1-221ENST00000612011 SSH2Q76I76 1423 aa13.85□□□□□ -0.19
PVT1-221ENST00000612011 AMER1Q5JTC6 1135 aaPredicted RBP13.85□□□□□ -0.19
PVT1-221ENST00000612011 CC2D1BQ5T0F9 858 aaKnown RBP13.85□□□□□ -0.19
PVT1-221ENST00000612011 BRD4O60885 1362 aaPredicted RBP13.84□□□□□ -0.19
PVT1-221ENST00000612011 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.84□□□□□ -0.19
PVT1-221ENST00000612011 PXDNQ92626 1479 aa13.84□□□□□ -0.19
PVT1-221ENST00000612011 PARD3Q8TEW0 1356 aa13.83□□□□□ -0.19
PVT1-221ENST00000612011 BRINP3Q76B58 766 aa13.83□□□□□ -0.2
PVT1-221ENST00000612011 TTC21BQ7Z4L5 1316 aa13.83□□□□□ -0.2
PVT1-221ENST00000612011 TTC21AQ8NDW8 1320 aa13.83□□□□□ -0.2
PVT1-221ENST00000612011 FOXO3O43524 673 aa13.82□□□□□ -0.2
PVT1-221ENST00000612011 PSME1Q06323 249 aa13.82□□□□□ -0.2
PVT1-221ENST00000612011 MIER1Q8N108 512 aa13.82□□□□□ -0.2
PVT1-221ENST00000612011 CERKQ8TCT0 537 aa13.82□□□□□ -0.2
PVT1-221ENST00000612011 PRKRIP1Q9H875 184 aaPredicted RBP13.82□□□□□ -0.2
PVT1-221ENST00000612011 NPHP3Q7Z494 1330 aa13.82□□□□□ -0.2
PVT1-221ENST00000612011 NME9Q86XW9 330 aa13.81□□□□□ -0.2
PVT1-221ENST00000612011 GGNBP2Q9H3C7 697 aa13.81□□□□□ -0.2
PVT1-221ENST00000612011 COL16A1Q07092 1604 aaPredicted RBP13.81□□□□□ -0.2
PVT1-221ENST00000612011 RGPD5Q99666 1765 aa13.81□□□□□ -0.2
PVT1-221ENST00000612011 OVOS2A0A0J9YW53 1432 aa13.81□□□□□ -0.2
PVT1-221ENST00000612011 OVOS2Q6IE36 1432 aa13.81□□□□□ -0.2
PVT1-221ENST00000612011 FYB1O15117 783 aa13.8□□□□□ -0.2
PVT1-221ENST00000612011 TOM1O60784 492 aa13.8□□□□□ -0.2
PVT1-221ENST00000612011 PAK3O75914 559 aaPredicted RBP13.8□□□□□ -0.2
PVT1-221ENST00000612011 XPCQ01831 940 aaPredicted RBP13.8□□□□□ -0.2
PVT1-221ENST00000612011 RALBP1Q15311 655 aa13.8□□□□□ -0.2
PVT1-221ENST00000612011 KRT28Q7Z3Y7 464 aa13.8□□□□□ -0.2
PVT1-221ENST00000612011 MED1Q15648 1581 aaPredicted RBP13.79□□□□□ -0.2
PVT1-221ENST00000612011 DDX17Q92841 729 aaKnown RBP13.79□□□□□ -0.2
PVT1-221ENST00000612011 TNS3Q68CZ2 1445 aa13.79□□□□□ -0.2
PVT1-221ENST00000612011 UBAP1LF5GYI3 381 aa13.78□□□□□ -0.2
PVT1-221ENST00000612011 MORC1Q86VD1 984 aa13.78□□□□□ -0.2
PVT1-221ENST00000612011 MYBBP1AQ9BQG0 1328 aaKnown RBP13.78□□□□□ -0.2
PVT1-221ENST00000612011 SBNO1A3KN83 1393 aa13.78□□□□□ -0.2
PVT1-221ENST00000612011 COL22A1Q8NFW1 1626 aaPredicted RBP13.78□□□□□ -0.2
PVT1-221ENST00000612011 SLIT3O75094 1523 aa13.77□□□□□ -0.21
PVT1-221ENST00000612011 SHPRHQ149N8 1683 aa13.77□□□□□ -0.21
PVT1-221ENST00000612011 USP31Q70CQ4 1352 aa13.77□□□□□ -0.21
PVT1-221ENST00000612011 COG3Q96JB2 828 aa13.77□□□□□ -0.21
PVT1-221ENST00000612011 PEAK1Q9H792 1746 aa13.77□□□□□ -0.21
PVT1-221ENST00000612011 ZRANB1Q9UGI0 708 aa13.77□□□□□ -0.21
PVT1-221ENST00000612011 SCAF1Q9H7N4 1312 aaKnown RBP13.76□□□□□ -0.21
PVT1-221ENST00000612011 NFAT5O94916 1531 aa13.75□□□□□ -0.21
PVT1-221ENST00000612011 SOS2Q07890 1332 aaPredicted RBP13.75□□□□□ -0.21
PVT1-221ENST00000612011 PIP4K2BP78356 416 aa13.75□□□□□ -0.21
PVT1-221ENST00000612011 ABTB2Q8N961 1025 aa13.75□□□□□ -0.21
PVT1-221ENST00000612011 RGPD2P0DJD1 1756 aa13.74□□□□□ -0.21
PVT1-221ENST00000612011 TNNT2P45379 298 aaPredicted RBP13.74□□□□□ -0.21
PVT1-221ENST00000612011 NLRP6P59044 892 aa13.74□□□□□ -0.21
PVT1-221ENST00000612011 NUTM2GQ5VZR2 741 aa13.74□□□□□ -0.21
PVT1-221ENST00000612011 LMOD2Q6P5Q4 547 aa13.74□□□□□ -0.21
PVT1-221ENST00000612011 ARHGEF10O15013 1369 aa13.73□□□□□ -0.21
PVT1-221ENST00000612011 SPATA31A3Q5VYP0 1347 aa13.73□□□□□ -0.21
PVT1-221ENST00000612011 PPP2R1AP30153 589 aa13.73□□□□□ -0.21
PVT1-221ENST00000612011 CCER2I3L3R5 266 aa13.72□□□□□ -0.21
PVT1-221ENST00000612011 NLRP13Q86W25 1043 aa13.72□□□□□ -0.21
PVT1-221ENST00000612011 COL18A1P39060 1754 aa13.71□□□□□ -0.21
PVT1-221ENST00000612011 SMG6Q86US8 1419 aaKnown RBP13.71□□□□□ -0.22
PVT1-221ENST00000612011 AATKQ6ZMQ8 1374 aa13.71□□□□□ -0.22
PVT1-221ENST00000612011 USP19O94966 1318 aa13.7□□□□□ -0.22
PVT1-221ENST00000612011 FAM208AQ9UK61 1670 aaKnown RBP13.7□□□□□ -0.22
PVT1-221ENST00000612011 CDK12Q9NYV4 1490 aaPredicted RBP13.7□□□□□ -0.22
PVT1-221ENST00000612011 SOX12O15370 315 aa13.69□□□□□ -0.22
PVT1-221ENST00000612011 PLEKHG5O94827 1062 aa13.69□□□□□ -0.22
PVT1-221ENST00000612011 PLCH1Q4KWH8 1693 aa13.69□□□□□ -0.22
PVT1-221ENST00000612011 CCDC184Q52MB2 194 aa13.68□□□□□ -0.22
PVT1-221ENST00000612011 MRS2Q9HD23 443 aa13.68□□□□□ -0.22
PVT1-221ENST00000612011 COL3A1P02461 1466 aaPredicted RBP13.67□□□□□ -0.22
PVT1-221ENST00000612011 RGPD1P0DJD0 1748 aa13.67□□□□□ -0.22
PVT1-221ENST00000612011 PNPLA6Q8IY17 1366 aa13.67□□□□□ -0.22
PVT1-221ENST00000612011 COL14A1Q05707 1796 aaKnown RBP13.66□□□□□ -0.22
PVT1-221ENST00000612011 ABCC6O95255 1503 aa13.66□□□□□ -0.22
PVT1-221ENST00000612011 FBLN1P23142 703 aa13.66□□□□□ -0.22
PVT1-221ENST00000612011 MTHFSP49914 203 aa13.66□□□□□ -0.22
PVT1-221ENST00000612011 RRS1Q15050 365 aaKnown RBP13.66□□□□□ -0.22
PVT1-221ENST00000612011 KCNH5Q8NCM2 988 aa13.66□□□□□ -0.22
PVT1-221ENST00000612011 LRRC59Q96AG4 307 aaKnown RBP13.66□□□□□ -0.22
PVT1-221ENST00000612011 LMO7Q8WWI1 1683 aa13.66□□□□□ -0.22
PVT1-221ENST00000612011 VIRMAQ69YN4 1812 aaKnown RBP13.65□□□□□ -0.22
PVT1-221ENST00000612011 CFAP53Q96M91 514 aa13.65□□□□□ -0.22
PVT1-221ENST00000612011 POLKQ9UBT6 870 aa13.65□□□□□ -0.22
PVT1-221ENST00000612011 EMILIN1Q9Y6C2 1016 aa13.65□□□□□ -0.22
PVT1-221ENST00000612011 RTL1A6NKG5 1358 aa13.64□□□□□ -0.23
PVT1-221ENST00000612011 PPM1GO15355 546 aaPredicted RBP13.64□□□□□ -0.23
PVT1-221ENST00000612011 DLG5Q8TDM6 1919 aa13.64□□□□□ -0.23
PVT1-221ENST00000612011 MAP3K19Q56UN5 1328 aa13.64□□□□□ -0.23
PVT1-221ENST00000612011 CAMTA1Q9Y6Y1 1673 aa13.63□□□□□ -0.23
PVT1-221ENST00000612011 FLT4P35916 1363 aa13.63□□□□□ -0.23
PVT1-221ENST00000612011 GCP02774 474 aa13.63□□□□□ -0.23
PVT1-221ENST00000612011 CABLES1Q8TDN4 633 aa13.63□□□□□ -0.23
PVT1-221ENST00000612011 NWD2Q9ULI1 1742 aa13.63□□□□□ -0.23
PVT1-221ENST00000612011 WNK3Q9BYP7 1800 aa13.62□□□□□ -0.23
PVT1-221ENST00000612011 NRAPQ86VF7 1730 aa13.62□□□□□ -0.23
PVT1-221ENST00000612011 KIF24Q5T7B8 1368 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms