RNA–Protein interactions for RNA: ENST00000611967.4

PCSK6-215, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 1 (best) BASIC

Gene PCSK6, Length 3,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-215ENST00000611967 MPNDQ8N594 471 aa27.15■■□□□ 1.94
PCSK6-215ENST00000611967 ELL2O00472 640 aaPredicted RBP27.14■■□□□ 1.94
PCSK6-215ENST00000611967 RAB3GAP1Q15042 981 aa27.14■■□□□ 1.94
PCSK6-215ENST00000611967 ATF7IPQ6VMQ6 1270 aa27.14■■□□□ 1.93
PCSK6-215ENST00000611967 GAS2L2Q8NHY3 880 aa27.14■■□□□ 1.93
PCSK6-215ENST00000611967 APBB1O00213 710 aa27.13■■□□□ 1.93
PCSK6-215ENST00000611967 SCAF11Q99590 1463 aaKnown RBP27.13■■□□□ 1.93
PCSK6-215ENST00000611967 ADGRF5Q8IZF2 1346 aa27.12■■□□□ 1.93
PCSK6-215ENST00000611967 K7ELQ4 463 aaPredicted RBP27.12■■□□□ 1.93
PCSK6-215ENST00000611967 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.12■■□□□ 1.93
PCSK6-215ENST00000611967 NSD3Q9BZ95 1437 aa27.11■■□□□ 1.93
PCSK6-215ENST00000611967 PRDM10Q9NQV6 1147 aa27.11■■□□□ 1.93
PCSK6-215ENST00000611967 RTEL1-TNFRSF6BF6WH68 1400 aa27.1■■□□□ 1.93
PCSK6-215ENST00000611967 DNTTIP2Q5QJE6 756 aaKnown RBP27.1■■□□□ 1.93
PCSK6-215ENST00000611967 CHD1LQ86WJ1 897 aa27.1■■□□□ 1.93
PCSK6-215ENST00000611967 SMC5Q8IY18 1101 aa27.1■■□□□ 1.93
PCSK6-215ENST00000611967 PTMAP06454 111 aaKnown RBP27.1■■□□□ 1.93
PCSK6-215ENST00000611967 RNF214Q8ND24 703 aa27.1■■□□□ 1.93
PCSK6-215ENST00000611967 IDI1Q13907 227 aa27.09■■□□□ 1.93
PCSK6-215ENST00000611967 KIDINS220Q9ULH0 1771 aa27.08■■□□□ 1.93
PCSK6-215ENST00000611967 CIZ1Q9ULV3 898 aaPredicted RBP27.08■■□□□ 1.93
PCSK6-215ENST00000611967 UQCRHLA0A096LP55 91 aa27.08■■□□□ 1.92
PCSK6-215ENST00000611967 UQCRHP07919 91 aa27.08■■□□□ 1.92
PCSK6-215ENST00000611967 BAG4O95429 457 aaKnown RBP27.07■■□□□ 1.92
PCSK6-215ENST00000611967 FOXD4L6Q3SYB3 417 aaPredicted RBP27.07■■□□□ 1.92
PCSK6-215ENST00000611967 FOXD4L3Q6VB84 417 aaPredicted RBP27.07■■□□□ 1.92
PCSK6-215ENST00000611967 RBM27Q9P2N5 1060 aaKnown RBP27.07■■□□□ 1.92
PCSK6-215ENST00000611967 PRPF40AO75400 957 aaKnown RBP27.06■■□□□ 1.92
PCSK6-215ENST00000611967 OFD1O75665 1012 aa27.06■■□□□ 1.92
PCSK6-215ENST00000611967 HDAC1Q13547 482 aaPredicted RBP27.06■■□□□ 1.92
PCSK6-215ENST00000611967 A0A0U1RQG5 324 aaPredicted RBP27.05■■□□□ 1.92
PCSK6-215ENST00000611967 EIF2AK4Q9P2K8 1649 aaKnown RBP27.05■■□□□ 1.92
PCSK6-215ENST00000611967 CHAMP1Q96JM3 812 aa27.05■■□□□ 1.92
PCSK6-215ENST00000611967 RBM25P49756 843 aaKnown RBP27.05■■□□□ 1.92
PCSK6-215ENST00000611967 SNX21Q969T3 373 aa27.05■■□□□ 1.92
PCSK6-215ENST00000611967 IPO8O15397 1037 aaKnown RBP27.04■■□□□ 1.92
PCSK6-215ENST00000611967 PTMSP20962 102 aa27.04■■□□□ 1.92
PCSK6-215ENST00000611967 TBC1D9Q6ZT07 1266 aa27.04■■□□□ 1.92
PCSK6-215ENST00000611967 PLXNC1O60486 1568 aa27.03■■□□□ 1.92
PCSK6-215ENST00000611967 POLR3AO14802 1390 aaPredicted RBP27.03■■□□□ 1.92
PCSK6-215ENST00000611967 RIPK4P57078 832 aa27.03■■□□□ 1.92
PCSK6-215ENST00000611967 VIRMAQ69YN4 1812 aaKnown RBP27.02■■□□□ 1.92
PCSK6-215ENST00000611967 MAST1Q9Y2H9 1570 aa27.02■■□□□ 1.92
PCSK6-215ENST00000611967 DIP2BQ9P265 1576 aa27.02■■□□□ 1.92
PCSK6-215ENST00000611967 NUCB1Q02818 461 aa27.01■■□□□ 1.91
PCSK6-215ENST00000611967 NPC1L1Q9UHC9 1359 aa27.01■■□□□ 1.91
PCSK6-215ENST00000611967 ATP10AO60312 1499 aa27■■□□□ 1.91
PCSK6-215ENST00000611967 PKP1Q13835 747 aa27■■□□□ 1.91
PCSK6-215ENST00000611967 KLHL40Q2TBA0 621 aa26.99■■□□□ 1.91
PCSK6-215ENST00000611967 NOL8Q76FK4 1167 aaKnown RBP26.99■■□□□ 1.91
PCSK6-215ENST00000611967 RBSNQ9H1K0 784 aa26.99■■□□□ 1.91
PCSK6-215ENST00000611967 GGNBP2Q9H3C7 697 aa26.99■■□□□ 1.91
PCSK6-215ENST00000611967 NEO1Q92859 1461 aa26.98■■□□□ 1.91
PCSK6-215ENST00000611967 PRIM1P49642 420 aaKnown RBP26.98■■□□□ 1.91
PCSK6-215ENST00000611967 PODXL2Q9NZ53 605 aa26.98■■□□□ 1.91
PCSK6-215ENST00000611967 ZSCAN23Q3MJ62 389 aa26.98■■□□□ 1.91
PCSK6-215ENST00000611967 ZBTB40Q9NUA8 1239 aa26.98■■□□□ 1.91
PCSK6-215ENST00000611967 INO80Q9ULG1 1556 aaPredicted RBP26.98■■□□□ 1.91
PCSK6-215ENST00000611967 ARAP3Q8WWN8 1544 aa26.98■■□□□ 1.91
PCSK6-215ENST00000611967 NPATQ14207 1427 aa26.97■■□□□ 1.91
PCSK6-215ENST00000611967 TMPOP42166 694 aaKnown RBP26.96■■□□□ 1.91
PCSK6-215ENST00000611967 ZHX1Q9UKY1 873 aaPredicted RBP26.96■■□□□ 1.91
PCSK6-215ENST00000611967 DDIT3P35638 169 aa26.96■■□□□ 1.91
PCSK6-215ENST00000611967 PPP1R9BQ96SB3 815 aa26.96■■□□□ 1.91
PCSK6-215ENST00000611967 ABCA6Q8N139 1617 aa26.96■■□□□ 1.91
PCSK6-215ENST00000611967 SYNMO15061 1565 aa26.95■■□□□ 1.91
PCSK6-215ENST00000611967 HECW2Q9P2P5 1572 aa26.95■■□□□ 1.9
PCSK6-215ENST00000611967 KIF2CQ99661 725 aa26.95■■□□□ 1.9
PCSK6-215ENST00000611967 SYCE3A1L190 88 aa26.95■■□□□ 1.9
PCSK6-215ENST00000611967 SLC24A1O60721 1099 aa26.94■■□□□ 1.9
PCSK6-215ENST00000611967 BMP2KLQ5H9B9 411 aa26.93■■□□□ 1.9
PCSK6-215ENST00000611967 PLCB2Q00722 1185 aa26.93■■□□□ 1.9
PCSK6-215ENST00000611967 THUMPD2Q9BTF0 503 aaKnown RBP26.93■■□□□ 1.9
PCSK6-215ENST00000611967 CABP2Q9NPB3 220 aa26.93■■□□□ 1.9
PCSK6-215ENST00000611967 MLH3Q9UHC1 1453 aa26.92■■□□□ 1.9
PCSK6-215ENST00000611967 UNC13BO14795 1591 aa26.91■■□□□ 1.9
PCSK6-215ENST00000611967 KIF16BQ96L93 1317 aa26.91■■□□□ 1.9
PCSK6-215ENST00000611967 ZMYM3Q14202 1370 aa26.91■■□□□ 1.9
PCSK6-215ENST00000611967 NOS1P29475 1434 aa26.9■■□□□ 1.9
PCSK6-215ENST00000611967 ZGPATQ8N5A5 531 aaKnown RBP26.9■■□□□ 1.9
PCSK6-215ENST00000611967 CEP152O94986 1710 aa26.89■■□□□ 1.9
PCSK6-215ENST00000611967 FRMPD1Q5SYB0 1578 aa26.89■■□□□ 1.9
PCSK6-215ENST00000611967 CDC45O75419 566 aa26.89■■□□□ 1.89
PCSK6-215ENST00000611967 TSC1Q92574 1164 aa26.88■■□□□ 1.89
PCSK6-215ENST00000611967 IQGAP3Q86VI3 1631 aa26.88■■□□□ 1.89
PCSK6-215ENST00000611967 CCDC27Q2M243 656 aa26.88■■□□□ 1.89
PCSK6-215ENST00000611967 SRPK2P78362 688 aaKnown RBP26.88■■□□□ 1.89
PCSK6-215ENST00000611967 NUCB2P80303 420 aa26.88■■□□□ 1.89
PCSK6-215ENST00000611967 PHF23Q9BUL5 403 aaPredicted RBP26.88■■□□□ 1.89
PCSK6-215ENST00000611967 ERVK-7P63135 1459 aa26.87■■□□□ 1.89
PCSK6-215ENST00000611967 NUTM2FA1L443 756 aa26.87■■□□□ 1.89
PCSK6-215ENST00000611967 JARID2Q92833 1246 aaPredicted RBP26.87■■□□□ 1.89
PCSK6-215ENST00000611967 MAP3K4Q9Y6R4 1608 aa26.86■■□□□ 1.89
PCSK6-215ENST00000611967 TRIM35Q9UPQ4 493 aa26.85■■□□□ 1.89
PCSK6-215ENST00000611967 AK9Q5TCS8 1911 aa26.85■■□□□ 1.89
PCSK6-215ENST00000611967 FAM177BA6PVY3 158 aa26.85■■□□□ 1.89
PCSK6-215ENST00000611967 C16orf71Q8IYS4 520 aaPredicted RBP26.85■■□□□ 1.89
PCSK6-215ENST00000611967 LAMC1P11047 1609 aa26.85■■□□□ 1.89
PCSK6-215ENST00000611967 DNAJC5Q9H3Z4 198 aa26.84■■□□□ 1.89
PCSK6-215ENST00000611967 NOL7Q9UMY1 257 aaKnown RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms