RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 WASLO00401 505 aaPredicted RBP19.52■□□□□ 0.72
HMGB1P24-201ENST00000611897 BTG4Q9NY30 223 aa19.52■□□□□ 0.72
HMGB1P24-201ENST00000611897 KRT27Q7Z3Y8 459 aa19.51■□□□□ 0.71
HMGB1P24-201ENST00000611897 COL14A1Q05707 1796 aaKnown RBP19.51■□□□□ 0.71
HMGB1P24-201ENST00000611897 FAM98CQ17RN3 349 aaKnown RBP19.5■□□□□ 0.71
HMGB1P24-201ENST00000611897 CRYBG1Q9Y4K1 1723 aa19.48■□□□□ 0.71
HMGB1P24-201ENST00000611897 ATP7BP35670 1465 aa19.48■□□□□ 0.71
HMGB1P24-201ENST00000611897 PRDM11Q9NQV5 511 aa19.47■□□□□ 0.71
HMGB1P24-201ENST00000611897 NUTM2GQ5VZR2 741 aa19.45■□□□□ 0.7
HMGB1P24-201ENST00000611897 NUDT16Q96DE0 195 aaKnown RBP19.45■□□□□ 0.7
HMGB1P24-201ENST00000611897 FAM182BQ5T319 152 aa19.44■□□□□ 0.7
HMGB1P24-201ENST00000611897 PHRF1Q9P1Y6 1649 aaKnown RBP19.43■□□□□ 0.7
HMGB1P24-201ENST00000611897 CHRNA2Q15822 529 aa19.43■□□□□ 0.7
HMGB1P24-201ENST00000611897 STAC3Q96MF2 364 aa19.43■□□□□ 0.7
HMGB1P24-201ENST00000611897 ONECUT3O60422 494 aaPredicted RBP19.42■□□□□ 0.7
HMGB1P24-201ENST00000611897 CDK19Q9BWU1 502 aa19.42■□□□□ 0.7
HMGB1P24-201ENST00000611897 STRN4Q9NRL3 753 aa19.42■□□□□ 0.7
HMGB1P24-201ENST00000611897 KIAA0232Q92628 1395 aa19.42■□□□□ 0.7
HMGB1P24-201ENST00000611897 TOPAZ1Q8N9V7 1692 aa19.41■□□□□ 0.7
HMGB1P24-201ENST00000611897 BAG6P46379 1132 aa19.41■□□□□ 0.7
HMGB1P24-201ENST00000611897 ZC3H6P61129 1189 aaKnown RBP19.4■□□□□ 0.7
HMGB1P24-201ENST00000611897 SPATA31A5Q5VU36 1347 aa19.4■□□□□ 0.7
HMGB1P24-201ENST00000611897 SPATA31A7Q8IWB4 1347 aa19.4■□□□□ 0.7
HMGB1P24-201ENST00000611897 PSDA5PKW4 1024 aaPredicted RBP19.39■□□□□ 0.69
HMGB1P24-201ENST00000611897 RGPD1P0DJD0 1748 aa19.39■□□□□ 0.69
HMGB1P24-201ENST00000611897 USP35Q9P2H5 1018 aa19.38■□□□□ 0.69
HMGB1P24-201ENST00000611897 KIAA1210Q9ULL0 1709 aa19.38■□□□□ 0.69
HMGB1P24-201ENST00000611897 THSD7AQ9UPZ6 1657 aa19.38■□□□□ 0.69
HMGB1P24-201ENST00000611897 ACEP12821 1306 aa19.37■□□□□ 0.69
HMGB1P24-201ENST00000611897 HRCP23327 699 aa19.36■□□□□ 0.69
HMGB1P24-201ENST00000611897 NBPF1Q3BBV0 1214 aa19.36■□□□□ 0.69
HMGB1P24-201ENST00000611897 SRPK2P78362 688 aaKnown RBP19.35■□□□□ 0.69
HMGB1P24-201ENST00000611897 EN1Q05925 392 aaPredicted RBP19.35■□□□□ 0.69
HMGB1P24-201ENST00000611897 CCDC61Q9Y6R9 512 aa19.34■□□□□ 0.69
HMGB1P24-201ENST00000611897 NRKQ7Z2Y5 1582 aa19.34■□□□□ 0.69
HMGB1P24-201ENST00000611897 TNS1Q9HBL0 1735 aaKnown RBP19.34■□□□□ 0.69
HMGB1P24-201ENST00000611897 QRICH2Q9H0J4 1663 aa19.33■□□□□ 0.69
HMGB1P24-201ENST00000611897 SPATA31A1Q5TZJ5 1347 aa19.33■□□□□ 0.69
HMGB1P24-201ENST00000611897 ZBTB7CA1YPR0 619 aa19.33■□□□□ 0.68
HMGB1P24-201ENST00000611897 NBPF8Q3BBV2 869 aa19.33■□□□□ 0.68
HMGB1P24-201ENST00000611897 ABTB2Q8N961 1025 aa19.33■□□□□ 0.68
HMGB1P24-201ENST00000611897 POLR3AO14802 1390 aaPredicted RBP19.32■□□□□ 0.68
HMGB1P24-201ENST00000611897 EVA1CP58658 441 aa19.32■□□□□ 0.68
HMGB1P24-201ENST00000611897 PPIP5K1Q6PFW1 1433 aa19.32■□□□□ 0.68
HMGB1P24-201ENST00000611897 CENPJQ9HC77 1338 aaPredicted RBP19.31■□□□□ 0.68
HMGB1P24-201ENST00000611897 CABP2Q9NPB3 220 aa19.31■□□□□ 0.68
HMGB1P24-201ENST00000611897 LRP5O75197 1615 aa19.3■□□□□ 0.68
HMGB1P24-201ENST00000611897 SSH2Q76I76 1423 aa19.3■□□□□ 0.68
HMGB1P24-201ENST00000611897 TRIM37O94972 964 aa19.29■□□□□ 0.68
HMGB1P24-201ENST00000611897 PLEKHG3A1L390 1219 aa19.28■□□□□ 0.68
HMGB1P24-201ENST00000611897 R3HDM1Q15032 1099 aaKnown RBP19.28■□□□□ 0.68
HMGB1P24-201ENST00000611897 CAMTA1Q9Y6Y1 1673 aa19.27■□□□□ 0.68
HMGB1P24-201ENST00000611897 LARP1Q6PKG0 1096 aaKnown RBP19.27■□□□□ 0.68
HMGB1P24-201ENST00000611897 PDE3BQ13370 1112 aa19.26■□□□□ 0.67
HMGB1P24-201ENST00000611897 EZH2Q15910 746 aaKnown RBP19.26■□□□□ 0.67
HMGB1P24-201ENST00000611897 LMO7Q8WWI1 1683 aa19.25■□□□□ 0.67
HMGB1P24-201ENST00000611897 NLRP13Q86W25 1043 aa19.25■□□□□ 0.67
HMGB1P24-201ENST00000611897 USP19O94966 1318 aa19.25■□□□□ 0.67
HMGB1P24-201ENST00000611897 FAM196AQ6ZSG2 479 aa19.24■□□□□ 0.67
HMGB1P24-201ENST00000611897 APBA3O96018 575 aa19.23■□□□□ 0.67
HMGB1P24-201ENST00000611897 TCP11L2Q8N4U5 519 aa19.23■□□□□ 0.67
HMGB1P24-201ENST00000611897 DISP2A7MBM2 1401 aa19.23■□□□□ 0.67
HMGB1P24-201ENST00000611897 CPDO75976 1380 aa19.22■□□□□ 0.67
HMGB1P24-201ENST00000611897 GCP02774 474 aa19.22■□□□□ 0.67
HMGB1P24-201ENST00000611897 CABP1Q9NZU7 370 aa19.22■□□□□ 0.67
HMGB1P24-201ENST00000611897 L3MBTL2Q969R5 705 aa19.21■□□□□ 0.67
HMGB1P24-201ENST00000611897 USP6P35125 1406 aa19.2■□□□□ 0.66
HMGB1P24-201ENST00000611897 NLRP6P59044 892 aa19.2■□□□□ 0.66
HMGB1P24-201ENST00000611897 BARGINQ6ZT62 677 aa19.2■□□□□ 0.66
HMGB1P24-201ENST00000611897 TRPM1Q7Z4N2 1603 aa19.2■□□□□ 0.66
HMGB1P24-201ENST00000611897 COL5A2P05997 1499 aaPredicted RBP19.2■□□□□ 0.66
HMGB1P24-201ENST00000611897 SOX12O15370 315 aa19.19■□□□□ 0.66
HMGB1P24-201ENST00000611897 NEUROD1Q13562 356 aa19.19■□□□□ 0.66
HMGB1P24-201ENST00000611897 PIK3C2AO00443 1686 aa19.18■□□□□ 0.66
HMGB1P24-201ENST00000611897 SIN3AQ96ST3 1273 aa19.18■□□□□ 0.66
HMGB1P24-201ENST00000611897 PARP4Q9UKK3 1724 aaKnown RBP19.17■□□□□ 0.66
HMGB1P24-201ENST00000611897 CAMKK2Q96RR4 588 aa19.17■□□□□ 0.66
HMGB1P24-201ENST00000611897 EVC2Q86UK5 1308 aa19.17■□□□□ 0.66
HMGB1P24-201ENST00000611897 RREB1Q92766 1687 aa19.17■□□□□ 0.66
HMGB1P24-201ENST00000611897 ROCK2O75116 1388 aaKnown RBP19.17■□□□□ 0.66
HMGB1P24-201ENST00000611897 NUP188Q5SRE5 1749 aa19.17■□□□□ 0.66
HMGB1P24-201ENST00000611897 CRB1P82279 1406 aa19.16■□□□□ 0.66
HMGB1P24-201ENST00000611897 SLIT3O75094 1523 aa19.15■□□□□ 0.66
HMGB1P24-201ENST00000611897 LRRC37A3O60309 1634 aa19.14■□□□□ 0.66
HMGB1P24-201ENST00000611897 TOM1L2Q6ZVM7 507 aa19.14■□□□□ 0.65
HMGB1P24-201ENST00000611897 THRAP3Q9Y2W1 955 aaKnown RBP19.14■□□□□ 0.65
HMGB1P24-201ENST00000611897 BRD4O60885 1362 aaPredicted RBP19.14■□□□□ 0.65
HMGB1P24-201ENST00000611897 PARD3Q8TEW0 1356 aa19.14■□□□□ 0.65
HMGB1P24-201ENST00000611897 AKAP12Q02952 1782 aa19.12■□□□□ 0.65
HMGB1P24-201ENST00000611897 RGPD5Q99666 1765 aa19.12■□□□□ 0.65
HMGB1P24-201ENST00000611897 OVOS2A0A0G2JMS6 1433 aa19.12■□□□□ 0.65
HMGB1P24-201ENST00000611897 OVOS2A0A0J9YW53 1432 aa19.12■□□□□ 0.65
HMGB1P24-201ENST00000611897 OVOS2Q6IE36 1432 aa19.12■□□□□ 0.65
HMGB1P24-201ENST00000611897 AATKQ6ZMQ8 1374 aa19.12■□□□□ 0.65
HMGB1P24-201ENST00000611897 WNK3Q9BYP7 1800 aa19.11■□□□□ 0.65
HMGB1P24-201ENST00000611897 CPSF1Q10570 1443 aaKnown RBP19.1■□□□□ 0.65
HMGB1P24-201ENST00000611897 CSB-PGBD3P0DP91 1061 aa19.1■□□□□ 0.65
HMGB1P24-201ENST00000611897 NBPF14Q5TI25 921 aa19.1■□□□□ 0.65
HMGB1P24-201ENST00000611897 COL18A1P39060 1754 aa19.09■□□□□ 0.65
HMGB1P24-201ENST00000611897 TTC21BQ7Z4L5 1316 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms