RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ALDH1L2Q3SY69 923 aa7.93□□□□□ -1.14
SNX13-213ENST00000611725 L1TD1Q5T7N2 865 aaKnown RBP7.93□□□□□ -1.14
SNX13-213ENST00000611725 TRMT2AQ8IZ69 625 aaKnown RBP7.93□□□□□ -1.14
SNX13-213ENST00000611725 ERCC6L2Q5T890 1561 aa7.93□□□□□ -1.14
SNX13-213ENST00000611725 OS9Q13438 667 aaPredicted RBP7.93□□□□□ -1.14
SNX13-213ENST00000611725 GCC1Q96CN9 775 aa7.93□□□□□ -1.14
SNX13-213ENST00000611725 TTC37Q6PGP7 1564 aa7.93□□□□□ -1.14
SNX13-213ENST00000611725 C1orf115Q9H7X2 142 aa7.92□□□□□ -1.14
SNX13-213ENST00000611725 ERVK-7P63135 1459 aa7.92□□□□□ -1.14
SNX13-213ENST00000611725 FKBP5Q13451 457 aaPredicted RBP7.92□□□□□ -1.14
SNX13-213ENST00000611725 TSPYL4Q9UJ04 414 aa7.92□□□□□ -1.14
SNX13-213ENST00000611725 THEMISQ8N1K5 641 aaPredicted RBP7.92□□□□□ -1.14
SNX13-213ENST00000611725 ABCC1P33527 1531 aa7.92□□□□□ -1.14
SNX13-213ENST00000611725 NCBP3Q53F19 620 aaKnown RBP7.92□□□□□ -1.14
SNX13-213ENST00000611725 TRIM44Q96DX7 344 aaPredicted RBP7.91□□□□□ -1.14
SNX13-213ENST00000611725 IFT57Q9NWB7 429 aa7.91□□□□□ -1.14
SNX13-213ENST00000611725 TEFQ10587 303 aa7.91□□□□□ -1.14
SNX13-213ENST00000611725 MCCP23508 829 aa7.9□□□□□ -1.14
SNX13-213ENST00000611725 DCTN1Q14203 1278 aa7.9□□□□□ -1.14
SNX13-213ENST00000611725 GAS2L2Q8NHY3 880 aa7.9□□□□□ -1.14
SNX13-213ENST00000611725 SLC4A2P04920 1241 aa7.9□□□□□ -1.14
SNX13-213ENST00000611725 PHACTR3Q96KR7 559 aa7.9□□□□□ -1.14
SNX13-213ENST00000611725 CDC45O75419 566 aa7.9□□□□□ -1.15
SNX13-213ENST00000611725 NUTM2GQ5VZR2 741 aa7.9□□□□□ -1.15
SNX13-213ENST00000611725 CHD1LQ86WJ1 897 aa7.9□□□□□ -1.15
SNX13-213ENST00000611725 FOXD4L1Q9NU39 408 aa7.9□□□□□ -1.15
SNX13-213ENST00000611725 REC8O95072 547 aa7.9□□□□□ -1.15
SNX13-213ENST00000611725 MLH3Q9UHC1 1453 aa7.9□□□□□ -1.15
SNX13-213ENST00000611725 GOLGA6L3A6NEY3 463 aa7.89□□□□□ -1.15
SNX13-213ENST00000611725 HDAC1Q13547 482 aaPredicted RBP7.89□□□□□ -1.15
SNX13-213ENST00000611725 YTHDC2Q9H6S0 1430 aaKnown RBP7.89□□□□□ -1.15
SNX13-213ENST00000611725 TRPM2O94759 1503 aa7.89□□□□□ -1.15
SNX13-213ENST00000611725 PRDM15P57071 1507 aaPredicted RBP7.89□□□□□ -1.15
SNX13-213ENST00000611725 RPAP2Q8IXW5 612 aaPredicted RBP7.89□□□□□ -1.15
SNX13-213ENST00000611725 HDAC5Q9UQL6 1122 aa7.89□□□□□ -1.15
SNX13-213ENST00000611725 ARHGAP45Q92619 1136 aa7.89□□□□□ -1.15
SNX13-213ENST00000611725 CEBPAP49715 358 aaPredicted RBP7.89□□□□□ -1.15
SNX13-213ENST00000611725 SMC5Q8IY18 1101 aa7.89□□□□□ -1.15
SNX13-213ENST00000611725 MBIPQ9NS73 344 aa7.89□□□□□ -1.15
SNX13-213ENST00000611725 MYOM2P54296 1465 aa7.89□□□□□ -1.15
SNX13-213ENST00000611725 ARAP3Q8WWN8 1544 aa7.88□□□□□ -1.15
SNX13-213ENST00000611725 NEO1Q92859 1461 aa7.88□□□□□ -1.15
SNX13-213ENST00000611725 ST18O60284 1047 aa7.88□□□□□ -1.15
SNX13-213ENST00000611725 MCM10Q7L590 875 aa7.88□□□□□ -1.15
SNX13-213ENST00000611725 ADCY10Q96PN6 1610 aa7.88□□□□□ -1.15
SNX13-213ENST00000611725 DDX11L8A8MPP1 907 aa7.88□□□□□ -1.15
SNX13-213ENST00000611725 GNAI3P08754 354 aa7.88□□□□□ -1.15
SNX13-213ENST00000611725 UGGT1Q9NYU2 1555 aa7.88□□□□□ -1.15
SNX13-213ENST00000611725 FAM83GA6ND36 823 aa7.88□□□□□ -1.15
SNX13-213ENST00000611725 TRIM6-TRIM34B2RNG4 842 aa7.88□□□□□ -1.15
SNX13-213ENST00000611725 NECTIN2Q92692 538 aa7.88□□□□□ -1.15
SNX13-213ENST00000611725 ZRANB1Q9UGI0 708 aa7.88□□□□□ -1.15
SNX13-213ENST00000611725 PHF23Q9BUL5 403 aaPredicted RBP7.88□□□□□ -1.15
SNX13-213ENST00000611725 EIF2S2P20042 333 aaKnown RBP7.87□□□□□ -1.15
SNX13-213ENST00000611725 ABTB2Q8N961 1025 aa7.87□□□□□ -1.15
SNX13-213ENST00000611725 TBC1D32Q96NH3 1257 aa7.87□□□□□ -1.15
SNX13-213ENST00000611725 TRIM35Q9UPQ4 493 aa7.87□□□□□ -1.15
SNX13-213ENST00000611725 YEATS2Q9ULM3 1422 aa7.87□□□□□ -1.15
SNX13-213ENST00000611725 HSP90AB2PQ58FF8 381 aa7.87□□□□□ -1.15
SNX13-213ENST00000611725 AMOTL2Q9Y2J4 779 aa7.87□□□□□ -1.15
SNX13-213ENST00000611725 VAMP4O75379 141 aa7.87□□□□□ -1.15
SNX13-213ENST00000611725 KCNJ4P48050 445 aa7.87□□□□□ -1.15
SNX13-213ENST00000611725 TBC1D2Q9BYX2 928 aa7.87□□□□□ -1.15
SNX13-213ENST00000611725 NCKAP5LQ9HCH0 1330 aa7.87□□□□□ -1.15
SNX13-213ENST00000611725 ZFYVE16Q7Z3T8 1539 aa7.87□□□□□ -1.15
SNX13-213ENST00000611725 PREX2Q70Z35 1606 aa7.87□□□□□ -1.15
SNX13-213ENST00000611725 ZBTB40Q9NUA8 1239 aa7.87□□□□□ -1.15
SNX13-213ENST00000611725 AEBP1Q8IUX7 1158 aa7.86□□□□□ -1.15
SNX13-213ENST00000611725 ACEP12821 1306 aa7.86□□□□□ -1.15
SNX13-213ENST00000611725 TTC21BQ7Z4L5 1316 aa7.86□□□□□ -1.15
SNX13-213ENST00000611725 INTS3Q68E01 1043 aaKnown RBP7.86□□□□□ -1.15
SNX13-213ENST00000611725 KIAA1211Q6ZU35 1233 aa7.86□□□□□ -1.15
SNX13-213ENST00000611725 CSB-PGBD3P0DP91 1061 aa7.86□□□□□ -1.15
SNX13-213ENST00000611725 BMP2KLQ5H9B9 411 aa7.86□□□□□ -1.15
SNX13-213ENST00000611725 TSPYL6Q8N831 410 aa7.86□□□□□ -1.15
SNX13-213ENST00000611725 RIMS2Q9UQ26 1411 aa7.86□□□□□ -1.15
SNX13-213ENST00000611725 PSME1Q06323 249 aa7.86□□□□□ -1.15
SNX13-213ENST00000611725 ANO2Q9NQ90 1003 aa7.86□□□□□ -1.15
SNX13-213ENST00000611725 TNRQ92752 1358 aa7.85□□□□□ -1.15
SNX13-213ENST00000611725 PTMSP20962 102 aa7.85□□□□□ -1.15
SNX13-213ENST00000611725 PLXNC1O60486 1568 aa7.85□□□□□ -1.15
SNX13-213ENST00000611725 SEC24BO95487 1268 aa7.85□□□□□ -1.15
SNX13-213ENST00000611725 CCDC30Q5VVM6 783 aa7.85□□□□□ -1.15
SNX13-213ENST00000611725 HDGFL1Q5TGJ6 251 aa7.85□□□□□ -1.15
SNX13-213ENST00000611725 C8orf58Q8NAV2 365 aa7.85□□□□□ -1.15
SNX13-213ENST00000611725 RSPH6AQ9H0K4 717 aa7.85□□□□□ -1.15
SNX13-213ENST00000611725 DDX49Q9Y6V7 483 aaKnown RBP7.85□□□□□ -1.15
SNX13-213ENST00000611725 ADGBQ8N7X0 1667 aa7.85□□□□□ -1.15
SNX13-213ENST00000611725 CCT4P50991 539 aaKnown RBP7.84□□□□□ -1.15
SNX13-213ENST00000611725 RILPL2Q969X0 211 aa7.84□□□□□ -1.15
SNX13-213ENST00000611725 MIS18AQ9NYP9 233 aa7.84□□□□□ -1.15
SNX13-213ENST00000611725 BRPF3Q9ULD4 1205 aa7.84□□□□□ -1.15
SNX13-213ENST00000611725 UBTFL1P0CB47 393 aaPredicted RBP7.84□□□□□ -1.15
SNX13-213ENST00000611725 RABEP1Q15276 862 aa7.84□□□□□ -1.15
SNX13-213ENST00000611725 BCORL1Q5H9F3 1711 aa7.84□□□□□ -1.15
SNX13-213ENST00000611725 MCM4P33991 863 aa7.84□□□□□ -1.15
SNX13-213ENST00000611725 NOL8Q76FK4 1167 aaKnown RBP7.83□□□□□ -1.16
SNX13-213ENST00000611725 EIF4A2Q14240 407 aaKnown RBP7.83□□□□□ -1.16
SNX13-213ENST00000611725 SKOR2Q2VWA4 1001 aaPredicted RBP7.83□□□□□ -1.16
SNX13-213ENST00000611725 C1orf141Q5JVX7 400 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms