RNA–Protein interactions for RNA: ENST00000611716.4

PCSK6-214, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCSK6, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-214ENST00000611716 EVC2Q86UK5 1308 aa23.98■■□□□ 1.43
PCSK6-214ENST00000611716 SCAPERQ9BY12 1400 aa23.98■■□□□ 1.43
PCSK6-214ENST00000611716 FBXW7Q969H0 707 aa23.98■■□□□ 1.43
PCSK6-214ENST00000611716 BIVM-ERCC5R4GMW8 1640 aa23.97■■□□□ 1.43
PCSK6-214ENST00000611716 NECTIN2Q92692 538 aa23.97■■□□□ 1.43
PCSK6-214ENST00000611716 TBC1D9Q6ZT07 1266 aa23.97■■□□□ 1.43
PCSK6-214ENST00000611716 USP25Q9UHP3 1055 aa23.97■■□□□ 1.43
PCSK6-214ENST00000611716 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.96■■□□□ 1.43
PCSK6-214ENST00000611716 IGSF3O75054 1194 aa23.96■■□□□ 1.43
PCSK6-214ENST00000611716 PRIM1P49642 420 aaKnown RBP23.96■■□□□ 1.43
PCSK6-214ENST00000611716 DYNC1I1O14576 645 aa23.96■■□□□ 1.43
PCSK6-214ENST00000611716 PPP4R3BQ5MIZ7 849 aa23.95■■□□□ 1.42
PCSK6-214ENST00000611716 GAS2L2Q8NHY3 880 aa23.95■■□□□ 1.42
PCSK6-214ENST00000611716 LMOD3Q0VAK6 560 aa23.94■■□□□ 1.42
PCSK6-214ENST00000611716 TRIM5Q9C035 493 aa23.94■■□□□ 1.42
PCSK6-214ENST00000611716 HECW1Q76N89 1606 aa23.94■■□□□ 1.42
PCSK6-214ENST00000611716 FAM177BA6PVY3 158 aa23.94■■□□□ 1.42
PCSK6-214ENST00000611716 TPD52L1Q16890 204 aaPredicted RBP23.94■■□□□ 1.42
PCSK6-214ENST00000611716 GAS2L3Q86XJ1 694 aa23.94■■□□□ 1.42
PCSK6-214ENST00000611716 BICD2Q8TD16 824 aa23.93■■□□□ 1.42
PCSK6-214ENST00000611716 SPATA31E1Q6ZUB1 1445 aa23.93■■□□□ 1.42
PCSK6-214ENST00000611716 HSP90B1P14625 803 aaKnown RBP23.93■■□□□ 1.42
PCSK6-214ENST00000611716 PRKAR2BP31323 418 aa23.93■■□□□ 1.42
PCSK6-214ENST00000611716 CCAR2Q8N163 923 aaKnown RBP23.92■■□□□ 1.42
PCSK6-214ENST00000611716 RAB3GAP1Q15042 981 aa23.92■■□□□ 1.42
PCSK6-214ENST00000611716 GNAI1P63096 354 aa23.92■■□□□ 1.42
PCSK6-214ENST00000611716 CGNQ9P2M7 1197 aaKnown RBP23.92■■□□□ 1.42
PCSK6-214ENST00000611716 THUMPD2Q9BTF0 503 aaKnown RBP23.91■■□□□ 1.42
PCSK6-214ENST00000611716 HTATSF1O43719 755 aaKnown RBP23.91■■□□□ 1.42
PCSK6-214ENST00000611716 ZKSCAN5Q9Y2L8 839 aa23.91■■□□□ 1.42
PCSK6-214ENST00000611716 TESK2Q96S53 571 aa23.9■■□□□ 1.42
PCSK6-214ENST00000611716 UPF3BQ9BZI7 483 aaKnown RBP23.9■■□□□ 1.42
PCSK6-214ENST00000611716 TMPOP42166 694 aaKnown RBP23.89■■□□□ 1.42
PCSK6-214ENST00000611716 ERC2O15083 957 aa23.89■■□□□ 1.41
PCSK6-214ENST00000611716 TWISTNBQ3B726 338 aaPredicted RBP23.89■■□□□ 1.41
PCSK6-214ENST00000611716 ERICH4A6NGS2 130 aa23.89■■□□□ 1.41
PCSK6-214ENST00000611716 GNL2Q13823 731 aaKnown RBP23.89■■□□□ 1.41
PCSK6-214ENST00000611716 SMARCA5O60264 1052 aaPredicted RBP23.88■■□□□ 1.41
PCSK6-214ENST00000611716 FSD2A1L4K1 749 aa23.87■■□□□ 1.41
PCSK6-214ENST00000611716 RALGAPBQ86X10 1494 aa23.87■■□□□ 1.41
PCSK6-214ENST00000611716 NGDNQ8NEJ9 315 aaKnown RBP23.87■■□□□ 1.41
PCSK6-214ENST00000611716 BMP2KLQ5H9B9 411 aa23.87■■□□□ 1.41
PCSK6-214ENST00000611716 SMC5Q8IY18 1101 aa23.87■■□□□ 1.41
PCSK6-214ENST00000611716 HOMER1Q86YM7 354 aa23.86■■□□□ 1.41
PCSK6-214ENST00000611716 TEX14Q8IWB6 1497 aa23.86■■□□□ 1.41
PCSK6-214ENST00000611716 CT47B1P0C2W7 299 aaPredicted RBP23.86■■□□□ 1.41
PCSK6-214ENST00000611716 H3BQV1 296 aa23.85■■□□□ 1.41
PCSK6-214ENST00000611716 IFFO2Q5TF58 517 aa23.85■■□□□ 1.41
PCSK6-214ENST00000611716 RBSNQ9H1K0 784 aa23.85■■□□□ 1.41
PCSK6-214ENST00000611716 ANTXR1Q9H6X2 564 aa23.85■■□□□ 1.41
PCSK6-214ENST00000611716 TTC12Q9H892 705 aaPredicted RBP23.85■■□□□ 1.41
PCSK6-214ENST00000611716 CCDC112Q8NEF3 446 aa23.84■■□□□ 1.41
PCSK6-214ENST00000611716 SNX21Q969T3 373 aa23.84■■□□□ 1.41
PCSK6-214ENST00000611716 CCDC66A2RUB6 948 aa23.83■■□□□ 1.41
PCSK6-214ENST00000611716 FOSBP53539 338 aa23.83■■□□□ 1.41
PCSK6-214ENST00000611716 TRERF1Q96PN7 1200 aa23.83■■□□□ 1.41
PCSK6-214ENST00000611716 MCM2P49736 904 aa23.83■■□□□ 1.4
PCSK6-214ENST00000611716 GPRASP1Q5JY77 1395 aa23.82■■□□□ 1.4
PCSK6-214ENST00000611716 ARHGEF11O15085 1522 aa23.82■■□□□ 1.4
PCSK6-214ENST00000611716 CD109Q6YHK3 1445 aa23.82■■□□□ 1.4
PCSK6-214ENST00000611716 TSC1Q92574 1164 aa23.82■■□□□ 1.4
PCSK6-214ENST00000611716 NSD3Q9BZ95 1437 aa23.82■■□□□ 1.4
PCSK6-214ENST00000611716 CAMSAP2Q08AD1 1489 aa23.81■■□□□ 1.4
PCSK6-214ENST00000611716 MCM5P33992 734 aa23.81■■□□□ 1.4
PCSK6-214ENST00000611716 FKBP5Q13451 457 aaPredicted RBP23.81■■□□□ 1.4
PCSK6-214ENST00000611716 LRSAM1Q6UWE0 723 aa23.81■■□□□ 1.4
PCSK6-214ENST00000611716 WDR33Q9C0J8 1336 aaKnown RBP23.81■■□□□ 1.4
PCSK6-214ENST00000611716 BBXQ8WY36 941 aaPredicted RBP23.81■■□□□ 1.4
PCSK6-214ENST00000611716 UGGT2Q9NYU1 1516 aa23.81■■□□□ 1.4
PCSK6-214ENST00000611716 ADCY5O95622 1261 aa23.81■■□□□ 1.4
PCSK6-214ENST00000611716 HDAC1Q13547 482 aaPredicted RBP23.81■■□□□ 1.4
PCSK6-214ENST00000611716 SF3A1Q15459 793 aaKnown RBP23.8■■□□□ 1.4
PCSK6-214ENST00000611716 GORABQ5T7V8 394 aa23.8■■□□□ 1.4
PCSK6-214ENST00000611716 NUCB1Q02818 461 aa23.8■■□□□ 1.4
PCSK6-214ENST00000611716 TPM3P06753 285 aa23.8■■□□□ 1.4
PCSK6-214ENST00000611716 ERBB4Q15303 1308 aa23.79■■□□□ 1.4
PCSK6-214ENST00000611716 LETM1O95202 739 aaPredicted RBP23.79■■□□□ 1.4
PCSK6-214ENST00000611716 ZGPATQ8N5A5 531 aaKnown RBP23.79■■□□□ 1.4
PCSK6-214ENST00000611716 FAM184AQ8NB25 1140 aa23.79■■□□□ 1.4
PCSK6-214ENST00000611716 LARP6Q9BRS8 491 aaKnown RBP23.79■■□□□ 1.4
PCSK6-214ENST00000611716 HCLS1P14317 486 aaPredicted RBP23.79■■□□□ 1.4
PCSK6-214ENST00000611716 TPM4P67936 248 aa23.79■■□□□ 1.4
PCSK6-214ENST00000611716 STAC3Q96MF2 364 aa23.79■■□□□ 1.4
PCSK6-214ENST00000611716 NOLC1Q14978 699 aaKnown RBP eCLIP23.78■■□□□ 1.4
PCSK6-214ENST00000611716 MAP4K4O95819 1239 aaPredicted RBP23.78■■□□□ 1.4
PCSK6-214ENST00000611716 ZKSCAN1P17029 563 aaPredicted RBP23.78■■□□□ 1.4
PCSK6-214ENST00000611716 NOL7Q9UMY1 257 aaKnown RBP23.77■■□□□ 1.4
PCSK6-214ENST00000611716 CCDC192P0DO97 292 aa23.77■■□□□ 1.4
PCSK6-214ENST00000611716 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.77■■□□□ 1.4
PCSK6-214ENST00000611716 TEX35Q5T0J7 233 aa23.77■■□□□ 1.4
PCSK6-214ENST00000611716 CFAP43Q8NDM7 1665 aa23.77■■□□□ 1.4
PCSK6-214ENST00000611716 C16orf45Q96MC5 204 aaPredicted RBP23.77■■□□□ 1.39
PCSK6-214ENST00000611716 USP19O94966 1318 aa23.76■■□□□ 1.39
PCSK6-214ENST00000611716 CCDC9Q9Y3X0 531 aaKnown RBP23.76■■□□□ 1.39
PCSK6-214ENST00000611716 CAMK4Q16566 473 aa23.75■■□□□ 1.39
PCSK6-214ENST00000611716 CCDC94Q9BW85 323 aaPredicted RBP23.75■■□□□ 1.39
PCSK6-214ENST00000611716 KIF21AQ7Z4S6 1674 aa23.75■■□□□ 1.39
PCSK6-214ENST00000611716 GPATCH3Q96I76 525 aa23.74■■□□□ 1.39
PCSK6-214ENST00000611716 EXOC6BQ9Y2D4 811 aa23.74■■□□□ 1.39
PCSK6-214ENST00000611716 CEBPZQ03701 1054 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms